RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 ST8SIA1Q92185 356 aa2.49□□□□□ -2.01
PABPC1-206ENST00000518293 RAB8BQ92930 207 aa2.49□□□□□ -2.01
PABPC1-206ENST00000518293 MAGOHBQ96A72 148 aaKnown RBP2.49□□□□□ -2.01
PABPC1-206ENST00000518293 EXOSC8Q96B26 276 aaKnown RBP2.49□□□□□ -2.01
PABPC1-206ENST00000518293 C16orf74Q96GX8 76 aa2.49□□□□□ -2.01
PABPC1-206ENST00000518293 SH3YL1Q96HL8 342 aaPredicted RBP2.49□□□□□ -2.01
PABPC1-206ENST00000518293 AMDHD1Q96NU7 426 aa2.49□□□□□ -2.01
PABPC1-206ENST00000518293 OR5B2Q96R09 309 aa2.49□□□□□ -2.01
PABPC1-206ENST00000518293 ATP6V0BQ99437 205 aa2.49□□□□□ -2.01
PABPC1-206ENST00000518293 DOK1Q99704 481 aa2.49□□□□□ -2.01
PABPC1-206ENST00000518293 NMUR2Q9GZQ4 415 aa2.49□□□□□ -2.01
PABPC1-206ENST00000518293 TREM2Q9NZC2 230 aa2.49□□□□□ -2.01
PABPC1-206ENST00000518293 VPS29Q9UBQ0 182 aa2.49□□□□□ -2.01
PABPC1-206ENST00000518293 FBXL3Q9UKT7 428 aa2.49□□□□□ -2.01
PABPC1-206ENST00000518293 STK38LQ9Y2H1 464 aa2.49□□□□□ -2.01
PABPC1-206ENST00000518293 HDGFL3Q9Y3E1 203 aa2.49□□□□□ -2.01
PABPC1-206ENST00000518293 FLVCR1Q9Y5Y0 555 aa2.49□□□□□ -2.01
PABPC1-206ENST00000518293 COL7A1Q02388 2944 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 TRRAPQ9Y4A5 3859 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 IGHV3-15A0A0B4J1V0 119 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 CLPSL1A2RUU4 121 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 C5orf63A6NC05 138 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 CLDN25C9JDP6 229 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 C9JVG2 144 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 DNALI1O14645 258 aaPredicted RBP2.48□□□□□ -2.01
PABPC1-206ENST00000518293 ZNF264O43296 627 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 RAD51CO43502 376 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 SMIM24O75264 130 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 NDUFA7O95182 113 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 VAMP5O95183 116 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 OTCP00480 354 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 IGHV3-23P01764 117 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 RBP1P09455 135 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 UQCRBP14927 111 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 CALRP27797 417 aaKnown RBP2.48□□□□□ -2.01
PABPC1-206ENST00000518293 ARR3P36575 388 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 KRTAP10-1P60331 282 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 SLC35A1P78382 337 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 C2orf80Q0P641 193 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 MERTKQ12866 999 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 FOXF1Q12946 379 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 CBX3Q13185 183 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 TRIP10Q15642 601 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 TTMPQ5BVD1 217 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 FBXO48Q5FWF7 155 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 MEDAGQ5VYS4 303 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 ETFRF1Q6IPR1 90 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 ZNF562Q6V9R5 426 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 NPSR1Q6W5P4 371 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 TMPPEQ6ZT21 453 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 CADM2Q8N3J6 435 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 RNF175Q8N4F7 328 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 COX18Q8N8Q8 333 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 WDR31Q8NA23 367 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 OR7G2Q8NG99 324 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 OR9A2Q8NGT5 310 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 OR5W2Q8NH69 310 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 MAGEE2Q8TD90 523 aaPredicted RBP2.48□□□□□ -2.01
PABPC1-206ENST00000518293 ANKRD49Q8WVL7 239 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 SELENOMQ8WWX9 145 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 TM4SF18Q96CE8 201 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 DDIT4LQ96D03 193 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 CHMP6Q96FZ7 201 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 ZNF681Q96N22 645 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 RBBP8Q99708 897 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 CITED1Q99966 193 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 GAL3ST1Q99999 423 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 SRXN1Q9BYN0 137 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 RACGAP1Q9H0H5 632 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 NARFLQ9H6Q4 476 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 IL20RAQ9UHF4 553 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 GUCA1BQ9UMX6 200 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 TFR2Q9UP52 801 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 CHMP2BQ9UQN3 213 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 TRAPPC4Q9Y296 219 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 RNF11Q9Y3C5 154 aa2.48□□□□□ -2.01
PABPC1-206ENST00000518293 NUP214P35658 2090 aaPredicted RBP2.48□□□□□ -2.01
PABPC1-206ENST00000518293 ARHGAP32A7KAX9 2087 aa2.47□□□□□ -2.01
PABPC1-206ENST00000518293 ARPC4-TTLL3A0A0A6YYG9 625 aa2.47□□□□□ -2.01
PABPC1-206ENST00000518293 IGHV1-18A0A0C4DH31 117 aa2.47□□□□□ -2.01
PABPC1-206ENST00000518293 IGHV1-69-2A0A0G2JMI3 117 aa2.47□□□□□ -2.01
PABPC1-206ENST00000518293 FBLL1A6NHQ2 334 aaKnown RBP2.47□□□□□ -2.01
PABPC1-206ENST00000518293 H0YL77 283 aa2.47□□□□□ -2.01
PABPC1-206ENST00000518293 H3BQF6 201 aa2.47□□□□□ -2.01
PABPC1-206ENST00000518293 PANO1I0J062 215 aa2.47□□□□□ -2.01
PABPC1-206ENST00000518293 UBXN8O00124 270 aa2.47□□□□□ -2.01
PABPC1-206ENST00000518293 PGRMC1O00264 195 aaKnown RBP2.47□□□□□ -2.01
PABPC1-206ENST00000518293 OR7A17O14581 309 aa2.47□□□□□ -2.01
PABPC1-206ENST00000518293 TM9SF1O15321 606 aa2.47□□□□□ -2.01
PABPC1-206ENST00000518293 IL3P08700 152 aa2.47□□□□□ -2.01
PABPC1-206ENST00000518293 IGFBP1P08833 259 aaPredicted RBP2.47□□□□□ -2.01
PABPC1-206ENST00000518293 ANXA4P09525 319 aaPredicted RBP2.47□□□□□ -2.01
PABPC1-206ENST00000518293 OR12D1P0DN82 309 aa2.47□□□□□ -2.01
PABPC1-206ENST00000518293 CBR1P16152 277 aa2.47□□□□□ -2.01
PABPC1-206ENST00000518293 MDKP21741 143 aaPredicted RBP2.47□□□□□ -2.01
PABPC1-206ENST00000518293 AHCYP23526 432 aa2.47□□□□□ -2.01
PABPC1-206ENST00000518293 PRDX6P30041 224 aa2.47□□□□□ -2.01
PABPC1-206ENST00000518293 HMOX2P30519 316 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms