RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 BTBD10Q9BSF8 475 aa16.23■□□□□ 0.19
SQSTM1-215ENST00000514093 TSSK6Q9BXA6 273 aa16.23■□□□□ 0.19
SQSTM1-215ENST00000514093 EFCAB1Q9HAE3 211 aa16.23■□□□□ 0.19
SQSTM1-215ENST00000514093 TAS2R1Q9NYW7 299 aa16.23■□□□□ 0.19
SQSTM1-215ENST00000514093 IL20Q9NYY1 176 aa16.23■□□□□ 0.19
SQSTM1-215ENST00000514093 OR14J1Q9UGF5 321 aa16.23■□□□□ 0.19
SQSTM1-215ENST00000514093 TENM2Q9NT68 2774 aa16.23■□□□□ 0.19
SQSTM1-215ENST00000514093 SACSQ9NZJ4 4579 aa16.23■□□□□ 0.19
SQSTM1-215ENST00000514093 C3orf84H3BNL1 204 aa16.22■□□□□ 0.19
SQSTM1-215ENST00000514093 SLC22A2O15244 555 aa16.22■□□□□ 0.19
SQSTM1-215ENST00000514093 SMIM21Q3B7S5 101 aa16.22■□□□□ 0.19
SQSTM1-215ENST00000514093 ABCA11PQ4W5N1 156 aa16.22■□□□□ 0.19
SQSTM1-215ENST00000514093 LCN8Q6JVE9 175 aa16.22■□□□□ 0.19
SQSTM1-215ENST00000514093 POC1AQ8NBT0 407 aa16.22■□□□□ 0.19
SQSTM1-215ENST00000514093 OTULINQ96BN8 352 aa16.22■□□□□ 0.19
SQSTM1-215ENST00000514093 ZNF649Q9BS31 505 aa16.22■□□□□ 0.19
SQSTM1-215ENST00000514093 ABCD2Q9UBJ2 740 aa16.22■□□□□ 0.19
SQSTM1-215ENST00000514093 FAM183AA6NL82 134 aa16.21■□□□□ 0.19
SQSTM1-215ENST00000514093 FAM90A22PA8MWA6 464 aa16.21■□□□□ 0.19
SQSTM1-215ENST00000514093 GASTP01350 101 aa16.21■□□□□ 0.19
SQSTM1-215ENST00000514093 GSTT1P30711 240 aa16.21■□□□□ 0.19
SQSTM1-215ENST00000514093 BLVRAP53004 296 aa16.21■□□□□ 0.19
SQSTM1-215ENST00000514093 PSME3P61289 254 aa16.21■□□□□ 0.19
SQSTM1-215ENST00000514093 ZNF770Q6IQ21 691 aaPredicted RBP16.21■□□□□ 0.19
SQSTM1-215ENST00000514093 ETV3LQ6ZN32 361 aa16.21■□□□□ 0.19
SQSTM1-215ENST00000514093 OR5A2Q8NGI9 324 aa16.21■□□□□ 0.19
SQSTM1-215ENST00000514093 NDNFQ8TB73 568 aa16.21■□□□□ 0.19
SQSTM1-215ENST00000514093 THEM6Q8WUY1 208 aa16.21■□□□□ 0.19
SQSTM1-215ENST00000514093 TFAP2CQ92754 450 aa16.21■□□□□ 0.19
SQSTM1-215ENST00000514093 MCUR1Q96AQ8 359 aa16.21■□□□□ 0.19
SQSTM1-215ENST00000514093 OR8B4Q96RC9 309 aa16.21■□□□□ 0.19
SQSTM1-215ENST00000514093 GPR61Q9BZJ8 451 aa16.21■□□□□ 0.19
SQSTM1-215ENST00000514093 GAR1Q9NY12 217 aaKnown RBP16.21■□□□□ 0.19
SQSTM1-215ENST00000514093 NDUFAB1O14561 156 aa16.2■□□□□ 0.18
SQSTM1-215ENST00000514093 GMNNO75496 209 aa16.2■□□□□ 0.18
SQSTM1-215ENST00000514093 FABP3P05413 133 aa16.2■□□□□ 0.18
SQSTM1-215ENST00000514093 ZNF728P0DKX0 622 aa16.2■□□□□ 0.18
SQSTM1-215ENST00000514093 IGHV1-8P0DP01 117 aa16.2■□□□□ 0.18
SQSTM1-215ENST00000514093 LMO1P25800 156 aa16.2■□□□□ 0.18
SQSTM1-215ENST00000514093 DCTN2Q13561 401 aaKnown RBP16.2■□□□□ 0.18
SQSTM1-215ENST00000514093 NKAPLQ5M9Q1 402 aa16.2■□□□□ 0.18
SQSTM1-215ENST00000514093 RASSF6Q6ZTQ3 369 aa16.2■□□□□ 0.18
SQSTM1-215ENST00000514093 SHFQ7M4L6 423 aa16.2■□□□□ 0.18
SQSTM1-215ENST00000514093 BCAS4Q8TDM0 211 aa16.2■□□□□ 0.18
SQSTM1-215ENST00000514093 ASCL2Q99929 193 aa16.2■□□□□ 0.18
SQSTM1-215ENST00000514093 ARMC1Q9NVT9 282 aa16.2■□□□□ 0.18
SQSTM1-215ENST00000514093 SOX14O95416 240 aa16.19■□□□□ 0.18
SQSTM1-215ENST00000514093 AZGP1P25311 298 aaKnown RBP16.19■□□□□ 0.18
SQSTM1-215ENST00000514093 MAP2K3P46734 347 aa16.19■□□□□ 0.18
SQSTM1-215ENST00000514093 EDDM3BP56851 147 aa16.19■□□□□ 0.18
SQSTM1-215ENST00000514093 ACTA2P62736 377 aa16.19■□□□□ 0.18
SQSTM1-215ENST00000514093 ACTG2P63267 376 aa16.19■□□□□ 0.18
SQSTM1-215ENST00000514093 ACTC1P68032 377 aa16.19■□□□□ 0.18
SQSTM1-215ENST00000514093 ACTA1P68133 377 aa16.19■□□□□ 0.18
SQSTM1-215ENST00000514093 PLCXD3Q63HM9 321 aa16.19■□□□□ 0.18
SQSTM1-215ENST00000514093 HACD2Q6Y1H2 254 aa16.19■□□□□ 0.18
SQSTM1-215ENST00000514093 GORASP2Q9H8Y8 452 aa16.19■□□□□ 0.18
SQSTM1-215ENST00000514093 OR5B21A6NL26 309 aa16.18■□□□□ 0.18
SQSTM1-215ENST00000514093 H3BUI4 141 aa16.18■□□□□ 0.18
SQSTM1-215ENST00000514093 SELENOFO60613 162 aa16.18■□□□□ 0.18
SQSTM1-215ENST00000514093 NXPH2O95156 264 aa16.18■□□□□ 0.18
SQSTM1-215ENST00000514093 LYNP07948 512 aa16.18■□□□□ 0.18
SQSTM1-215ENST00000514093 PGA5P0DJD9 388 aa16.18■□□□□ 0.18
SQSTM1-215ENST00000514093 HAAOP46952 286 aa16.18■□□□□ 0.18
SQSTM1-215ENST00000514093 PPP1R8Q12972 351 aaKnown RBP16.18■□□□□ 0.18
SQSTM1-215ENST00000514093 C18orf65Q6ZTR6 163 aa16.18■□□□□ 0.18
SQSTM1-215ENST00000514093 ASCC1Q8N9N2 400 aaKnown RBP16.18■□□□□ 0.18
SQSTM1-215ENST00000514093 OR2T33Q8NG76 320 aa16.18■□□□□ 0.18
SQSTM1-215ENST00000514093 VIPAS39Q9H9C1 493 aa16.18■□□□□ 0.18
SQSTM1-215ENST00000514093 KLHDC2Q9Y2U9 406 aa16.18■□□□□ 0.18
SQSTM1-215ENST00000514093 RIIAD1A6NNX1 92 aa16.17■□□□□ 0.18
SQSTM1-215ENST00000514093 K7N7A8 449 aa16.17■□□□□ 0.18
SQSTM1-215ENST00000514093 IFNGP01579 166 aa16.17■□□□□ 0.18
SQSTM1-215ENST00000514093 THBS3P49746 956 aa16.17■□□□□ 0.18
SQSTM1-215ENST00000514093 PSMA6P60900 246 aaKnown RBP16.17■□□□□ 0.18
SQSTM1-215ENST00000514093 DGCR2P98153 550 aa16.17■□□□□ 0.18
SQSTM1-215ENST00000514093 C9orf152Q5JTZ5 239 aa16.17■□□□□ 0.18
SQSTM1-215ENST00000514093 SAMD4BQ5PRF9 694 aaKnown RBP16.17■□□□□ 0.18
SQSTM1-215ENST00000514093 MINOS1Q5TGZ0 78 aa16.17■□□□□ 0.18
SQSTM1-215ENST00000514093 UNQ9370/PRO34162Q6UXP9 181 aa16.17■□□□□ 0.18
SQSTM1-215ENST00000514093 KRT74Q7RTS7 529 aa16.17■□□□□ 0.18
SQSTM1-215ENST00000514093 TCF23Q7RTU1 214 aa16.17■□□□□ 0.18
SQSTM1-215ENST00000514093 CAPSLQ8WWF8 208 aa16.17■□□□□ 0.18
SQSTM1-215ENST00000514093 SLC25A33Q9BSK2 321 aa16.17■□□□□ 0.18
SQSTM1-215ENST00000514093 OR51V1Q9H2C8 321 aa16.17■□□□□ 0.18
SQSTM1-215ENST00000514093 NIPAL2Q9H841 368 aa16.17■□□□□ 0.18
SQSTM1-215ENST00000514093 LYVE1Q9Y5Y7 322 aa16.17■□□□□ 0.18
SQSTM1-215ENST00000514093 MINOS1-NBL1R4GNA1 71 aa16.17■□□□□ 0.18
SQSTM1-215ENST00000514093 H0YHG0 523 aa16.16■□□□□ 0.18
SQSTM1-215ENST00000514093 TNFRSF11BO00300 401 aa16.16■□□□□ 0.18
SQSTM1-215ENST00000514093 ZNF3P17036 446 aa16.16■□□□□ 0.18
SQSTM1-215ENST00000514093 CASC10Q5T4H9 136 aa16.16■□□□□ 0.18
SQSTM1-215ENST00000514093 COMMD2Q86X83 199 aa16.16■□□□□ 0.18
SQSTM1-215ENST00000514093 ZNF676Q8N7Q3 588 aa16.16■□□□□ 0.18
SQSTM1-215ENST00000514093 AQP11Q8NBQ7 271 aa16.16■□□□□ 0.18
SQSTM1-215ENST00000514093 OTOSQ8NHW6 89 aa16.16■□□□□ 0.18
SQSTM1-215ENST00000514093 STMN2Q93045 179 aa16.16■□□□□ 0.18
SQSTM1-215ENST00000514093 ZNF714Q96N38 554 aa16.16■□□□□ 0.18
SQSTM1-215ENST00000514093 NRIP2Q9BQI9 281 aa16.16■□□□□ 0.18
SQSTM1-215ENST00000514093 MCRIP2Q9BUT9 160 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms