RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 MAFIPQ8WZ33 124 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 C10orf35Q96D05 121 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 CYYR1Q96J86 154 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 SOHLH2Q9NX45 425 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 KIAA1456Q9P272 454 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 ZDHHC8Q9ULC8 765 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 LAMA3Q16787 3333 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 THADAQ6YHU6 1953 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 IGKV1D-8A0A087WSZ0 117 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 B4DGG1 531 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 ST8SIA3O43173 380 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 SEMA4FO95754 770 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 IFNA10P01566 189 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 DTYMKP23919 212 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 PPP1CCP36873 323 aaKnown RBP15.55■□□□□ 0.08
NUP54-205ENST00000507257 CCR5P51681 352 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 PIGPP57054 158 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 C9orf152Q5JTZ5 239 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 LIAT1Q6ZQX7 453 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 GALNTL5Q7Z4T8 443 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 C1QL2Q7Z5L3 287 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 SH3BGRL3Q9H299 93 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 PRDM13Q9H4Q3 707 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 ZNF701Q9NV72 531 aaPredicted RBP15.55■□□□□ 0.08
NUP54-205ENST00000507257 GFOD1Q9NXC2 390 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 MCTS1Q9ULC4 181 aaKnown RBP15.55■□□□□ 0.08
NUP54-205ENST00000507257 V9GYS6 101 aa15.55■□□□□ 0.08
NUP54-205ENST00000507257 EXPH5Q8NEV8 1989 aa15.54■□□□□ 0.08
NUP54-205ENST00000507257 A0A0U1RQV5 110 aa15.54■□□□□ 0.08
NUP54-205ENST00000507257 RBFOX3A6NFN3 312 aa15.54■□□□□ 0.08
NUP54-205ENST00000507257 TGOLN2O43493 480 aa15.54■□□□□ 0.08
NUP54-205ENST00000507257 IGHV4-34P06331 123 aa15.54■□□□□ 0.08
NUP54-205ENST00000507257 CLRN1P58418 232 aa15.54■□□□□ 0.08
NUP54-205ENST00000507257 MRPS21P82921 87 aaKnown RBP15.54■□□□□ 0.08
NUP54-205ENST00000507257 TFF2Q03403 129 aa15.54■□□□□ 0.08
NUP54-205ENST00000507257 C1orf61Q13536 156 aa15.54■□□□□ 0.08
NUP54-205ENST00000507257 ZNF266Q14584 549 aa15.54■□□□□ 0.08
NUP54-205ENST00000507257 ELOBQ15370 118 aa15.54■□□□□ 0.08
NUP54-205ENST00000507257 SLC25A53Q5H9E4 307 aa15.54■□□□□ 0.08
NUP54-205ENST00000507257 PLXDC2Q6UX71 529 aa15.54■□□□□ 0.08
NUP54-205ENST00000507257 ZNF383Q8NA42 475 aa15.54■□□□□ 0.08
NUP54-205ENST00000507257 GTF3AQ92664 365 aaKnown RBP15.54■□□□□ 0.08
NUP54-205ENST00000507257 SLAMF9Q96A28 289 aa15.54■□□□□ 0.08
NUP54-205ENST00000507257 ZDHHC12Q96GR4 267 aa15.54■□□□□ 0.08
NUP54-205ENST00000507257 WDR77Q9BQA1 342 aaPredicted RBP15.54■□□□□ 0.08
NUP54-205ENST00000507257 EMC6Q9BV81 110 aa15.54■□□□□ 0.08
NUP54-205ENST00000507257 HSF4Q9ULV5 492 aa15.54■□□□□ 0.08
NUP54-205ENST00000507257 PUS1Q9Y606 427 aaKnown RBP eCLIP15.54■□□□□ 0.08
NUP54-205ENST00000507257 VSTM2BA6NLU5 285 aa15.53■□□□□ 0.08
NUP54-205ENST00000507257 H3BQ15 152 aa15.53■□□□□ 0.08
NUP54-205ENST00000507257 OR5H8P0DN80 308 aa15.53■□□□□ 0.08
NUP54-205ENST00000507257 EFNA3P52797 238 aa15.53■□□□□ 0.08
NUP54-205ENST00000507257 FAM213BQ8TBF2 198 aa15.53■□□□□ 0.08
NUP54-205ENST00000507257 HAS2Q92819 552 aa15.53■□□□□ 0.08
NUP54-205ENST00000507257 SYT3Q9BQG1 590 aa15.53■□□□□ 0.08
NUP54-205ENST00000507257 RPP25Q9BUL9 199 aaKnown RBP15.53■□□□□ 0.08
NUP54-205ENST00000507257 ANGPTL4Q9BY76 406 aa15.53■□□□□ 0.08
NUP54-205ENST00000507257 C11orf1Q9H5F2 150 aa15.53■□□□□ 0.08
NUP54-205ENST00000507257 NECAP2Q9NVZ3 263 aa15.53■□□□□ 0.08
NUP54-205ENST00000507257 RP1P56715 2156 aa15.53■□□□□ 0.08
NUP54-205ENST00000507257 IGHV5-51A0A0C4DH38 117 aa15.53■□□□□ 0.08
NUP54-205ENST00000507257 STMND1H3BQB6 276 aa15.53■□□□□ 0.08
NUP54-205ENST00000507257 C1QL1O75973 258 aa15.53■□□□□ 0.08
NUP54-205ENST00000507257 KLK3P07288 261 aaPredicted RBP15.53■□□□□ 0.08
NUP54-205ENST00000507257 ZNF728P0DKX0 622 aa15.53■□□□□ 0.08
NUP54-205ENST00000507257 RBP2P50120 134 aa15.53■□□□□ 0.08
NUP54-205ENST00000507257 SPSB3Q6PJ21 355 aa15.53■□□□□ 0.08
NUP54-205ENST00000507257 TTLL10Q6ZVT0 673 aa15.53■□□□□ 0.08
NUP54-205ENST00000507257 FAM57BQ71RH2 274 aa15.53■□□□□ 0.08
NUP54-205ENST00000507257 UEVLDQ8IX04 471 aa15.53■□□□□ 0.08
NUP54-205ENST00000507257 LGI3Q8N145 548 aa15.53■□□□□ 0.08
NUP54-205ENST00000507257 RTN4IP1Q8WWV3 396 aaPredicted RBP15.53■□□□□ 0.08
NUP54-205ENST00000507257 SGK3Q96BR1 496 aa15.53■□□□□ 0.08
NUP54-205ENST00000507257 RAB39BQ96DA2 213 aa15.53■□□□□ 0.08
NUP54-205ENST00000507257 Q96M66 194 aa15.53■□□□□ 0.08
NUP54-205ENST00000507257 SPSB2Q99619 263 aa15.53■□□□□ 0.08
NUP54-205ENST00000507257 LRRC61Q9BV99 259 aa15.53■□□□□ 0.08
NUP54-205ENST00000507257 CHD7Q9P2D1 2997 aa15.52■□□□□ 0.08
NUP54-205ENST00000507257 HSD17B6O14756 317 aa15.52■□□□□ 0.07
NUP54-205ENST00000507257 HSPB1P04792 205 aaKnown RBP15.52■□□□□ 0.07
NUP54-205ENST00000507257 SRP19P09132 144 aaKnown RBP15.52■□□□□ 0.07
NUP54-205ENST00000507257 OR5AC1P0C628 307 aa15.52■□□□□ 0.07
NUP54-205ENST00000507257 THEGLP0DJG4 465 aa15.52■□□□□ 0.07
NUP54-205ENST00000507257 CTHP32929 405 aa15.52■□□□□ 0.07
NUP54-205ENST00000507257 UCP3P55916 312 aa15.52■□□□□ 0.07
NUP54-205ENST00000507257 NDUFA6P56556 154 aa15.52■□□□□ 0.07
NUP54-205ENST00000507257 NSDHLQ15738 373 aa15.52■□□□□ 0.07
NUP54-205ENST00000507257 HIST3H3Q16695 136 aa15.52■□□□□ 0.07
NUP54-205ENST00000507257 FBXW12Q6X9E4 464 aa15.52■□□□□ 0.07
NUP54-205ENST00000507257 ZNF283Q8N7M2 679 aa15.52■□□□□ 0.07
NUP54-205ENST00000507257 OR4D5Q8NGN0 318 aa15.52■□□□□ 0.07
NUP54-205ENST00000507257 OR6X1Q8NH79 312 aa15.52■□□□□ 0.07
NUP54-205ENST00000507257 RNF138Q8WVD3 245 aa15.52■□□□□ 0.07
NUP54-205ENST00000507257 CPNE4Q96A23 557 aaPredicted RBP15.52■□□□□ 0.07
NUP54-205ENST00000507257 MSI2Q96DH6 328 aaKnown RBP15.52■□□□□ 0.07
NUP54-205ENST00000507257 MARS2Q96GW9 593 aaKnown RBP15.52■□□□□ 0.07
NUP54-205ENST00000507257 BOD1Q96IK1 185 aa15.52■□□□□ 0.07
NUP54-205ENST00000507257 ZNF587BE7ETH6 402 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 HIST1H2BKO60814 126 aa15.51■□□□□ 0.07
NUP54-205ENST00000507257 PITX3O75364 302 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms