RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 TXNL1O43396 289 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 TRAF3IP2O43734 574 aaPredicted RBP11.81□□□□□ -0.52
GPC1-209ENST00000495100 HPNP05981 417 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 GLP1RP43220 463 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 PPIAP62937 165 aaKnown RBP11.81□□□□□ -0.52
GPC1-209ENST00000495100 PDZD11Q5EBL8 140 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 DOK3Q7L591 496 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 OR13G1Q8NGZ3 307 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 OR6S1Q8NH40 331 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 NUP210Q8TEM1 1887 aaPredicted RBP11.81□□□□□ -0.52
GPC1-209ENST00000495100 HIST1H2AAQ96QV6 131 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 TLNRD1Q9H1K6 362 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 SCPEP1Q9HB40 452 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 GTF3C1Q12789 2109 aa11.8□□□□□ -0.52
GPC1-209ENST00000495100 WIPF3A6NGB9 483 aa11.8□□□□□ -0.52
GPC1-209ENST00000495100 HMGB3O15347 200 aaKnown RBP11.8□□□□□ -0.52
GPC1-209ENST00000495100 OR5AC1P0C628 307 aa11.8□□□□□ -0.52
GPC1-209ENST00000495100 CPT2P23786 658 aa11.8□□□□□ -0.52
GPC1-209ENST00000495100 VAMP2P63027 116 aa11.8□□□□□ -0.52
GPC1-209ENST00000495100 OPN5Q6U736 354 aa11.8□□□□□ -0.52
GPC1-209ENST00000495100 TMEM182Q6ZP80 229 aaPredicted RBP11.8□□□□□ -0.52
GPC1-209ENST00000495100 LYZL2Q7Z4W2 148 aa11.8□□□□□ -0.52
GPC1-209ENST00000495100 SPEM1Q8N4L4 309 aa11.8□□□□□ -0.52
GPC1-209ENST00000495100 C14orf79Q96F83 325 aa11.8□□□□□ -0.52
GPC1-209ENST00000495100 ZNF175Q9Y473 711 aa11.8□□□□□ -0.52
GPC1-209ENST00000495100 IGKV1-9A0A0C4DH69 117 aa11.8□□□□□ -0.52
GPC1-209ENST00000495100 ATXN7O15265 892 aaPredicted RBP11.8□□□□□ -0.52
GPC1-209ENST00000495100 BPNT1O95861 308 aa11.8□□□□□ -0.52
GPC1-209ENST00000495100 ZNF728P0DKX0 622 aa11.8□□□□□ -0.52
GPC1-209ENST00000495100 JMJD6Q6NYC1 403 aaPredicted RBP11.8□□□□□ -0.52
GPC1-209ENST00000495100 OR2M3Q8NG83 312 aa11.8□□□□□ -0.52
GPC1-209ENST00000495100 RTN4IP1Q8WWV3 396 aaPredicted RBP11.8□□□□□ -0.52
GPC1-209ENST00000495100 THOC3Q96J01 351 aaKnown RBP11.8□□□□□ -0.52
GPC1-209ENST00000495100 DEFB127Q9H1M4 99 aa11.8□□□□□ -0.52
GPC1-209ENST00000495100 EMC3Q9P0I2 261 aa11.8□□□□□ -0.52
GPC1-209ENST00000495100 SHOXO15266 292 aa11.8□□□□□ -0.52
GPC1-209ENST00000495100 NPIPB7O75200 414 aa11.8□□□□□ -0.52
GPC1-209ENST00000495100 MRPL33O75394 65 aaKnown RBP11.8□□□□□ -0.52
GPC1-209ENST00000495100 ZBTB25P24278 435 aa11.8□□□□□ -0.52
GPC1-209ENST00000495100 RPL12P30050 165 aaKnown RBP11.8□□□□□ -0.52
GPC1-209ENST00000495100 CBX5P45973 191 aa11.8□□□□□ -0.52
GPC1-209ENST00000495100 HAAOP46952 286 aa11.8□□□□□ -0.52
GPC1-209ENST00000495100 GPM6AP51674 278 aa11.8□□□□□ -0.52
GPC1-209ENST00000495100 PUSL1Q8N0Z8 303 aaKnown RBP11.8□□□□□ -0.52
GPC1-209ENST00000495100 NAA11Q9BSU3 229 aaPredicted RBP11.8□□□□□ -0.52
GPC1-209ENST00000495100 RGCCQ9H4X1 137 aa11.8□□□□□ -0.52
GPC1-209ENST00000495100 MCTS1Q9ULC4 181 aaKnown RBP11.8□□□□□ -0.52
GPC1-209ENST00000495100 ARFGEF3Q5TH69 2177 aa11.79□□□□□ -0.52
GPC1-209ENST00000495100 GPR37O15354 613 aa11.79□□□□□ -0.52
GPC1-209ENST00000495100 ARG1P05089 322 aa11.79□□□□□ -0.52
GPC1-209ENST00000495100 PGA4P0DJD7 388 aa11.79□□□□□ -0.52
GPC1-209ENST00000495100 PGA3P0DJD8 388 aa11.79□□□□□ -0.52
GPC1-209ENST00000495100 HAGHQ16775 308 aa11.79□□□□□ -0.52
GPC1-209ENST00000495100 SLC25A42Q86VD7 318 aa11.79□□□□□ -0.52
GPC1-209ENST00000495100 ZNF100Q8IYN0 542 aa11.79□□□□□ -0.52
GPC1-209ENST00000495100 GCNT2Q8N0V5 402 aa11.79□□□□□ -0.52
GPC1-209ENST00000495100 RSRP1Q9BUV0 290 aa11.79□□□□□ -0.52
GPC1-209ENST00000495100 METTL9Q9H1A3 318 aa11.79□□□□□ -0.52
GPC1-209ENST00000495100 SLC25A32Q9H2D1 315 aa11.79□□□□□ -0.52
GPC1-209ENST00000495100 SLCO5A1Q9H2Y9 848 aa11.79□□□□□ -0.52
GPC1-209ENST00000495100 TNFSF18Q9UNG2 199 aa11.79□□□□□ -0.52
GPC1-209ENST00000495100 RNF222A6NCQ9 220 aa11.79□□□□□ -0.52
GPC1-209ENST00000495100 CDRT15L2A8MXV6 281 aa11.79□□□□□ -0.52
GPC1-209ENST00000495100 H0YIZ8 118 aa11.79□□□□□ -0.52
GPC1-209ENST00000495100 OR2F2O95006 317 aa11.79□□□□□ -0.52
GPC1-209ENST00000495100 EPHA8P29322 1005 aaPredicted RBP11.79□□□□□ -0.52
GPC1-209ENST00000495100 OR2F1Q13607 317 aa11.79□□□□□ -0.52
GPC1-209ENST00000495100 OR6K3Q8NGY3 331 aa11.79□□□□□ -0.52
GPC1-209ENST00000495100 RNF141Q8WVD5 230 aa11.79□□□□□ -0.52
GPC1-209ENST00000495100 EDARQ9UNE0 448 aa11.79□□□□□ -0.52
GPC1-209ENST00000495100 DCHS1Q96JQ0 3298 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 HMSDA8MTL9 139 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 ACTL6AO96019 429 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 NRASP01111 189 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 BMP5P22003 454 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 ADH6P28332 368 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 NPBWR1P48145 328 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 ZFP62Q8NB50 900 aaPredicted RBP11.78□□□□□ -0.52
GPC1-209ENST00000495100 OR9K2Q8NGE7 335 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 OR5AP2Q8NGF4 316 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 FAM234AQ9H0X4 552 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 USF3Q68DE3 2245 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 A0A1B0GTI1 187 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 A6NLC8 198 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 IFNA2P01563 188 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 CHRM2P08172 466 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 ZNF735P0CB33 412 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 ZNF14P17017 642 aaPredicted RBP11.78□□□□□ -0.52
GPC1-209ENST00000495100 ACKR3P25106 362 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 MPGP29372 298 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 KCNJ3P48549 501 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 SHBQ15464 509 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 TSC22D1Q15714 1073 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 TMEM268Q5VZI3 342 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 TMPRSS7Q7RTY8 843 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 MRPL21Q7Z2W9 205 aaKnown RBP11.78□□□□□ -0.52
GPC1-209ENST00000495100 PLPP5Q8NEB5 264 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 OR10Z1Q8NGY1 313 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 RHOFQ9HBH0 211 aa11.78□□□□□ -0.52
GPC1-209ENST00000495100 IL36RNQ9UBH0 155 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms