RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 PDZK1IP1Q13113 114 aa16.39■□□□□ 0.21
USP39-218ENST00000493829 PCGF3Q3KNV8 242 aa16.39■□□□□ 0.21
USP39-218ENST00000493829 FAM209AQ5JX71 171 aa16.39■□□□□ 0.21
USP39-218ENST00000493829 C1orf100Q5SVJ3 147 aa16.39■□□□□ 0.21
USP39-218ENST00000493829 ZNF671Q8TAW3 534 aa16.39■□□□□ 0.21
USP39-218ENST00000493829 AQP3Q92482 292 aa16.39■□□□□ 0.21
USP39-218ENST00000493829 SMURF1Q9HCE7 757 aa16.39■□□□□ 0.21
USP39-218ENST00000493829 CACNG2Q9Y698 323 aa16.39■□□□□ 0.21
USP39-218ENST00000493829 CHD3Q12873 2000 aaKnown RBP16.39■□□□□ 0.21
USP39-218ENST00000493829 IGKV1-12A0A0C4DH73 117 aa16.38■□□□□ 0.21
USP39-218ENST00000493829 TRIM64BA6NI03 449 aa16.38■□□□□ 0.21
USP39-218ENST00000493829 IGKV1D-12P01611 117 aa16.38■□□□□ 0.21
USP39-218ENST00000493829 TESK1Q15569 626 aa16.38■□□□□ 0.21
USP39-218ENST00000493829 BOLLQ8N9W6 283 aaKnown RBP16.38■□□□□ 0.21
USP39-218ENST00000493829 OR51D1Q8NGF3 324 aa16.38■□□□□ 0.21
USP39-218ENST00000493829 OR51F2Q8NH61 342 aa16.38■□□□□ 0.21
USP39-218ENST00000493829 LGALS14Q8TCE9 139 aa16.38■□□□□ 0.21
USP39-218ENST00000493829 FAM46BQ96A09 425 aa16.38■□□□□ 0.21
USP39-218ENST00000493829 SLC25A28Q96A46 364 aa16.38■□□□□ 0.21
USP39-218ENST00000493829 S100A13Q99584 98 aa16.38■□□□□ 0.21
USP39-218ENST00000493829 FN3KRPQ9HA64 309 aa16.38■□□□□ 0.21
USP39-218ENST00000493829 PTPN13Q12923 2485 aa16.38■□□□□ 0.21
USP39-218ENST00000493829 CELSR2Q9HCU4 2923 aa16.38■□□□□ 0.21
USP39-218ENST00000493829 DSCAMO60469 2012 aa16.38■□□□□ 0.21
USP39-218ENST00000493829 BCL3P20749 454 aa16.37■□□□□ 0.21
USP39-218ENST00000493829 SERPINA2P20848 420 aa16.37■□□□□ 0.21
USP39-218ENST00000493829 SLC22A6Q4U2R8 563 aa16.37■□□□□ 0.21
USP39-218ENST00000493829 FAM76BQ5HYJ3 339 aa16.37■□□□□ 0.21
USP39-218ENST00000493829 OR10K2Q6IF99 312 aa16.37■□□□□ 0.21
USP39-218ENST00000493829 FAM166AQ6J272 317 aa16.37■□□□□ 0.21
USP39-218ENST00000493829 CDH26Q8IXH8 852 aa16.37■□□□□ 0.21
USP39-218ENST00000493829 C11orf53Q8IXP5 236 aa16.37■□□□□ 0.21
USP39-218ENST00000493829 RAB1BQ9H0U4 201 aa16.37■□□□□ 0.21
USP39-218ENST00000493829 GCM1Q9NP62 436 aa16.37■□□□□ 0.21
USP39-218ENST00000493829 DCAF16Q9NXF7 216 aa16.37■□□□□ 0.21
USP39-218ENST00000493829 PPP1R3CQ9UQK1 317 aa16.37■□□□□ 0.21
USP39-218ENST00000493829 A0A1W2PP11 408 aa16.37■□□□□ 0.21
USP39-218ENST00000493829 AKR7A2O43488 359 aa16.37■□□□□ 0.21
USP39-218ENST00000493829 NDUFS7O75251 213 aa16.37■□□□□ 0.21
USP39-218ENST00000493829 CYB5AP00167 134 aa16.37■□□□□ 0.21
USP39-218ENST00000493829 ARSBP15848 533 aa16.37■□□□□ 0.21
USP39-218ENST00000493829 TNFRSF1AP19438 455 aa16.37■□□□□ 0.21
USP39-218ENST00000493829 PMELP40967 661 aa16.37■□□□□ 0.21
USP39-218ENST00000493829 NPBWR2P48146 333 aa16.37■□□□□ 0.21
USP39-218ENST00000493829 SNU13P55769 128 aaKnown RBP16.37■□□□□ 0.21
USP39-218ENST00000493829 PLA2G7Q13093 441 aa16.37■□□□□ 0.21
USP39-218ENST00000493829 RSU1Q15404 277 aa16.37■□□□□ 0.21
USP39-218ENST00000493829 DGUOKQ16854 277 aa16.37■□□□□ 0.21
USP39-218ENST00000493829 WDR82Q6UXN9 313 aa16.37■□□□□ 0.21
USP39-218ENST00000493829 CROCCP3Q8IVE0 287 aa16.37■□□□□ 0.21
USP39-218ENST00000493829 CELF2-AS1Q8N7Q2 184 aa16.37■□□□□ 0.21
USP39-218ENST00000493829 FAM3DQ96BQ1 224 aa16.37■□□□□ 0.21
USP39-218ENST00000493829 GAL3ST1Q99999 423 aa16.37■□□□□ 0.21
USP39-218ENST00000493829 PKIBQ9C010 78 aa16.37■□□□□ 0.21
USP39-218ENST00000493829 SLIRPQ9GZT3 109 aaKnown RBP16.37■□□□□ 0.21
USP39-218ENST00000493829 TLNRD1Q9H1K6 362 aa16.37■□□□□ 0.21
USP39-218ENST00000493829 CENPEQ02224 2701 aa16.36■□□□□ 0.21
USP39-218ENST00000493829 F8VVB4 439 aa16.36■□□□□ 0.21
USP39-218ENST00000493829 F8VWA3 439 aa16.36■□□□□ 0.21
USP39-218ENST00000493829 LYNX1G3V0Z9 82 aa16.36■□□□□ 0.21
USP39-218ENST00000493829 H7C417 338 aa16.36■□□□□ 0.21
USP39-218ENST00000493829 CYB5R3P00387 301 aaPredicted RBP16.36■□□□□ 0.21
USP39-218ENST00000493829 LYNX1P0DP58 116 aa16.36■□□□□ 0.21
USP39-218ENST00000493829 IL24Q13007 206 aa16.36■□□□□ 0.21
USP39-218ENST00000493829 RIN1Q13671 783 aa16.36■□□□□ 0.21
USP39-218ENST00000493829 METAP1DQ6UB28 335 aaPredicted RBP16.36■□□□□ 0.21
USP39-218ENST00000493829 MKXQ8IYA7 352 aa16.36■□□□□ 0.21
USP39-218ENST00000493829 OR5H6Q8NGV6 325 aa16.36■□□□□ 0.21
USP39-218ENST00000493829 LRRC29Q8WV35 223 aa16.36■□□□□ 0.21
USP39-218ENST00000493829 C6orf62Q9GZU0 229 aaPredicted RBP16.36■□□□□ 0.21
USP39-218ENST00000493829 BANF2Q9H503 90 aa16.36■□□□□ 0.21
USP39-218ENST00000493829 RBFOX1Q9NWB1 397 aaKnown RBP16.36■□□□□ 0.21
USP39-218ENST00000493829 MTCH1Q9NZJ7 389 aa16.36■□□□□ 0.21
USP39-218ENST00000493829 COMMD3Q9UBI1 195 aa16.36■□□□□ 0.21
USP39-218ENST00000493829 FBXO9Q9UK97 447 aaPredicted RBP16.36■□□□□ 0.21
USP39-218ENST00000493829 PLEKHA6Q9Y2H5 1048 aa16.36■□□□□ 0.21
USP39-218ENST00000493829 POLDIP2Q9Y2S7 368 aa16.36■□□□□ 0.21
USP39-218ENST00000493829 WNT9BO14905 357 aa16.35■□□□□ 0.21
USP39-218ENST00000493829 CRTAPO75718 401 aaPredicted RBP16.35■□□□□ 0.21
USP39-218ENST00000493829 HTR3BO95264 441 aa16.35■□□□□ 0.21
USP39-218ENST00000493829 PTBP3O95758 552 aaKnown RBP16.35■□□□□ 0.21
USP39-218ENST00000493829 SFTPBP07988 381 aa16.35■□□□□ 0.21
USP39-218ENST00000493829 CD37P11049 281 aa16.35■□□□□ 0.21
USP39-218ENST00000493829 MPZP25189 248 aa16.35■□□□□ 0.21
USP39-218ENST00000493829 GATA4P43694 442 aa16.35■□□□□ 0.21
USP39-218ENST00000493829 C19orf18Q8NEA5 215 aa16.35■□□□□ 0.21
USP39-218ENST00000493829 MCFD2Q8NI22 146 aa16.35■□□□□ 0.21
USP39-218ENST00000493829 TBC1D15Q8TC07 691 aa16.35■□□□□ 0.21
USP39-218ENST00000493829 AP3S1Q92572 193 aa16.35■□□□□ 0.21
USP39-218ENST00000493829 C1orf147Q96MC9 270 aaPredicted RBP16.35■□□□□ 0.21
USP39-218ENST00000493829 METTL9Q9H1A3 318 aa16.35■□□□□ 0.21
USP39-218ENST00000493829 OR5V1Q9UGF6 321 aa16.35■□□□□ 0.21
USP39-218ENST00000493829 TACC2O95359 2948 aa16.35■□□□□ 0.21
USP39-218ENST00000493829 IGHV1-69-2A0A0G2JMI3 117 aa16.34■□□□□ 0.21
USP39-218ENST00000493829 TRAPPC2LH3BP13 241 aa16.34■□□□□ 0.21
USP39-218ENST00000493829 ZNF205O95201 554 aa16.34■□□□□ 0.21
USP39-218ENST00000493829 BPNT1O95861 308 aa16.34■□□□□ 0.21
USP39-218ENST00000493829 EGR1P18146 543 aa16.34■□□□□ 0.21
USP39-218ENST00000493829 CFPP27918 469 aa16.34■□□□□ 0.21
USP39-218ENST00000493829 C2orf76Q3KRA6 126 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms