RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, human

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSX2IP-208	ENST00000490476	LRRIQ3	A6PVS8	624 aa	Predicted RBP	3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	CLDN34	H7C241	214 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	CLPX	O76031	633 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	LY6H	O94772	140 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	H6PD	O95479	791 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	SOD1	P00441	154 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	CHTF8	P0CG12	524 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	ZNF19	P17023	458 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	ZNF43	P17038	809 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	PTN	P21246	168 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	EFNA4	P52798	201 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	SUB1	P53999	127 aa	Known RBP eCLIP	3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	EMP2	P54851	167 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	DAOA	P59103	153 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	GPX6	P59796	221 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	GTF2B	Q00403	316 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	REG3A	Q06141	175 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	MERTK	Q12866	999 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	SAXO2	Q658L1	398 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	ADNP2	Q6IQ32	1131 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	UGT2A3	Q6UWM9	527 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	SETD3	Q86TU7	594 aa	Predicted RBP	3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	CDKL3	Q8IVW4	592 aa	Predicted RBP	3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	C11orf53	Q8IXP5	236 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	SPAG16	Q8N0X2	631 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	OR7G2	Q8NG99	324 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	OR5B3	Q8NH48	314 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	ACMSD	Q8TDX5	336 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	NTAN1	Q96AB6	310 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	ISOC1	Q96CN7	298 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	PHYHIPL	Q96FC7	376 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	SH3GL1	Q99961	368 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	BPIFA3	Q9BQP9	254 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	C11orf70	Q9BRQ4	267 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	RIOK2	Q9BVS4	552 aa	Known RBP	3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	TTTY12	Q9BZ98	90 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	BPESC1	Q9GZL8	116 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	SRMS	Q9H3Y6	488 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	TRIM45	Q9H8W5	580 aa	Predicted RBP	3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	GLRX2	Q9NS18	164 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	IMP3	Q9NV31	184 aa	Known RBP	3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	EXD2	Q9NVH0	621 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	CAB39	Q9Y376	341 aa	Predicted RBP	3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	DNAH17	Q9UFH2	4485 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	LRP2	P98164	4655 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	DNAH6	Q9C0G6	4158 aa		3.36	□□□□□ -1.87
SSX2IP-208	ENST00000490476	HEATR1	Q9H583	2144 aa	Known RBP	3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	TRGV5	A0A0B4J1U4	118 aa		3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	PINLYP	A6NC86	204 aa		3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	GJE1	A6NN92	205 aa		3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476		B4DSR2	109 aa		3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	TEX46	H3BTG2	121 aa		3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	FGF4	P08620	206 aa		3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	PRDX3	P30048	256 aa	Known RBP	3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	GPR6	P46095	362 aa	Predicted RBP	3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	NPBWR2	P48146	333 aa		3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	TMED10	P49755	219 aa	Known RBP	3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	RORC	P51449	518 aa		3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	ACTA2	P62736	377 aa		3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	ACTG2	P63267	376 aa		3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	ACTC1	P68032	377 aa		3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	ACTA1	P68133	377 aa		3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	ECH1	Q13011	328 aa		3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	KIAA0087	Q14695	138 aa		3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	ARHGAP19	Q14CB8	494 aa		3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	SOHLH1	Q5JUK2	328 aa		3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	LY6G6F	Q5SQ64	297 aa		3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	IL34	Q6ZMJ4	242 aa		3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	BZW1	Q7L1Q6	419 aa	Known RBP	3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	OFCC1	Q8IZS5	231 aa		3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	TMEM251	Q8N6I4	163 aa		3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	CCDC54	Q8NEL0	328 aa		3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	RHEBL1	Q8TAI7	183 aa		3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	SLC7A13	Q8TCU3	470 aa		3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	COX14	Q96I36	57 aa		3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	RANBP3	Q9H6Z4	567 aa	Predicted RBP	3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	GEMIN7	Q9H840	131 aa	Known RBP	3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	FAM60A	Q9NP50	221 aa		3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	FGF20	Q9NP95	211 aa	Predicted RBP	3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	DDX18	Q9NVP1	670 aa	Known RBP	3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	CLCF1	Q9UBD9	225 aa		3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476	ZNF282	Q9UDV7	671 aa	Predicted RBP	3.35	□□□□□ -1.87
SSX2IP-208	ENST00000490476		A0A1B0GVY2	172 aa		3.34	□□□□□ -1.87
SSX2IP-208	ENST00000490476		H7C417	338 aa		3.34	□□□□□ -1.87
SSX2IP-208	ENST00000490476	NPIPB7	O75200	414 aa		3.34	□□□□□ -1.87
SSX2IP-208	ENST00000490476	TSPAN13	O95857	204 aa		3.34	□□□□□ -1.87
SSX2IP-208	ENST00000490476	GKN3P	P0CG01	181 aa		3.34	□□□□□ -1.87
SSX2IP-208	ENST00000490476	INAFM2	P0DMQ5	153 aa		3.34	□□□□□ -1.87
SSX2IP-208	ENST00000490476	HPGD	P15428	266 aa		3.34	□□□□□ -1.87
SSX2IP-208	ENST00000490476	GTF2E2	P29084	291 aa	Known RBP	3.34	□□□□□ -1.87
SSX2IP-208	ENST00000490476	OR1E1	P30953	314 aa		3.34	□□□□□ -1.87
SSX2IP-208	ENST00000490476	RRM2	P31350	389 aa		3.34	□□□□□ -1.87
SSX2IP-208	ENST00000490476	NAA10	P41227	235 aa	Predicted RBP	3.34	□□□□□ -1.87
SSX2IP-208	ENST00000490476	CDKN1B	P46527	198 aa		3.34	□□□□□ -1.87
SSX2IP-208	ENST00000490476	GABRA4	P48169	554 aa		3.34	□□□□□ -1.87
SSX2IP-208	ENST00000490476	RFX3	P48380	749 aa		3.34	□□□□□ -1.87
SSX2IP-208	ENST00000490476	RHOA	P61586	193 aa		3.34	□□□□□ -1.87
SSX2IP-208	ENST00000490476	UNC119	Q13432	240 aa		3.34	□□□□□ -1.87
SSX2IP-208	ENST00000490476	SLC9A3R2	Q15599	337 aa		3.34	□□□□□ -1.87
SSX2IP-208	ENST00000490476	CCDC14	Q49A88	953 aa		3.34	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms