RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	IGHV4-31	P0DP07	118 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	FAH	P16930	419 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	ZNF20	P17024	532 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	ADRA2C	P18825	462 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	ATF1	P18846	271 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	RAB3A	P20336	220 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	LMO1	P25800	156 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	FGF9	P31371	208 aa	Predicted RBP	4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	GABRA5	P31644	462 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	KCNJ3	P48549	501 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	ATP1B3	P54709	279 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	RIPPLY3	P57055	190 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	SCAND1	P57086	179 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	RPS11	P62280	158 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	PAX2	Q02962	417 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	DBP	Q10586	325 aa	Predicted RBP	4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	GPR176	Q14439	515 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	ZMYND11	Q15326	602 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	UBE2V2	Q15819	145 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	FAM189A2	Q15884	450 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	TST	Q16762	297 aa	Known RBP	4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	STUM	Q69YW2	141 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	CYB5R2	Q6BCY4	276 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	FAM166A	Q6J272	317 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	FIP1L1	Q6UN15	594 aa	Known RBP	4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	UNQ9370/PRO34162	Q6UXP9	181 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	GDPGP1	Q6ZNW5	385 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	ZNF788	Q6ZQV5	615 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	SPATC1	Q76KD6	591 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	SLC36A1	Q7Z2H8	476 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	WDR86	Q86TI4	376 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	LYPD6	Q86Y78	171 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	OR5AS1	Q8N127	324 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	ZCCHC24	Q8N2G6	241 aa	Known RBP	4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	ZNF561	Q8N587	486 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	KIR3DL3	Q8N743	410 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	ZNF676	Q8N7Q3	588 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	SCCPDH	Q8NBX0	429 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	BHLHE23	Q8NDY6	225 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	BPIFB6	Q8NFQ5	453 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	OR51T1	Q8NGJ9	327 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	ANGPTL6	Q8NI99	470 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	GHSR	Q92847	366 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	TMEM106A	Q96A25	262 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	BORCS8	Q96FH0	119 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	NEIL1	Q96FI4	390 aa	Predicted RBP	4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	MED30	Q96HR3	178 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	RNF170	Q96K19	258 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	OPALIN	Q96PE5	141 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	NR1H4	Q96RI1	486 aa	Predicted RBP	4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	TBX5	Q99593	518 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	NUDT16L1	Q9BRJ7	211 aa	Known RBP	4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	ZCCHC4	Q9H5U6	513 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	ZNF665	Q9H7R5	613 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	NDUFB11	Q9NX14	153 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	CKLF	Q9UBR5	152 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	FBLN5	Q9UBX5	448 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	ZNF222	Q9UK12	451 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	DHDH	Q9UQ10	334 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	JMJD1C	Q15652	2540 aa		4.26	□□□□□ -1.73
HDAC6-223	ENST00000480525	ARHGAP32	A7KAX9	2087 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	IGKV1-9	A0A0C4DH69	117 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525		A0A0G2JMP0	313 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525		A0A0X1KG70	313 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	CEACAM18	A8MTB9	384 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525		A8MV72	311 aa	Predicted RBP	4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	ZNF732	B4DXR9	585 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	RNF223	E7ERA6	249 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525		E9PI62	339 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525		H0YL77	283 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	PSMD9	O00233	223 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	CDIPT	O14735	213 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	SIGLEC5	O15389	551 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	MAGEB3	O15480	346 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	CA11	O75493	328 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	RPP14	O95059	124 aa	Known RBP	4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	APOL3	O95236	402 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	CYB5A	P00167	134 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	LALBA	P00709	142 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	FSHB	P01225	129 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	UCHL1	P09936	223 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	OCM2	P0CE71	109 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	JUNB	P17275	347 aa	Predicted RBP	4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	CEL	P19835	753 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	HNF1A	P20823	631 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	AZGP1	P25311	298 aa	Known RBP	4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	ERP29	P30040	261 aa	Known RBP	4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	PMEL	P40967	661 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	MTNR1B	P49286	362 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	ZP1	P60852	638 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	PPP3R1	P63098	170 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	PDZK1IP1	Q13113	114 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	IL13RA2	Q14627	380 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	KISS1	Q15726	138 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	MPPED2	Q15777	294 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	ESCO2	Q56NI9	601 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	SYT6	Q5T7P8	510 aa	Predicted RBP	4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	OR2G6	Q5TZ20	316 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	PLCXD3	Q63HM9	321 aa		4.25	□□□□□ -1.73
HDAC6-223	ENST00000480525	ASPHD2	Q6ICH7	369 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms