RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 PHB2Q99623 299 aa2.37□□□□□ -2.03
HMGN4-202ENST00000477243 MCHR1Q99705 422 aa2.37□□□□□ -2.03
HMGN4-202ENST00000477243 RARRES2Q99969 163 aa2.37□□□□□ -2.03
HMGN4-202ENST00000477243 NUDT9Q9BW91 350 aa2.37□□□□□ -2.03
HMGN4-202ENST00000477243 OSBPL11Q9BXB4 747 aa2.37□□□□□ -2.03
HMGN4-202ENST00000477243 UGT2B28Q9BY64 529 aa2.37□□□□□ -2.03
HMGN4-202ENST00000477243 SELENOIQ9C0D9 397 aa2.37□□□□□ -2.03
HMGN4-202ENST00000477243 ACTR6Q9GZN1 396 aa2.37□□□□□ -2.03
HMGN4-202ENST00000477243 RBM38Q9H0Z9 239 aaKnown RBP2.37□□□□□ -2.03
HMGN4-202ENST00000477243 KLK15Q9H2R5 256 aa2.37□□□□□ -2.03
HMGN4-202ENST00000477243 ASB7Q9H672 318 aa2.37□□□□□ -2.03
HMGN4-202ENST00000477243 WDR41Q9HAD4 459 aa2.37□□□□□ -2.03
HMGN4-202ENST00000477243 XPNPEP1Q9NQW7 623 aa2.37□□□□□ -2.03
HMGN4-202ENST00000477243 ABCC13Q9NSE7 274 aa2.37□□□□□ -2.03
HMGN4-202ENST00000477243 TMEM181Q9P2C4 612 aa2.37□□□□□ -2.03
HMGN4-202ENST00000477243 SLC2A6Q9UGQ3 507 aa2.37□□□□□ -2.03
HMGN4-202ENST00000477243 SMPXQ9UHP9 88 aa2.37□□□□□ -2.03
HMGN4-202ENST00000477243 ZNF391Q9UJN7 358 aa2.37□□□□□ -2.03
HMGN4-202ENST00000477243 RARRES3Q9UL19 164 aa2.37□□□□□ -2.03
HMGN4-202ENST00000477243 MMP17Q9ULZ9 603 aa2.37□□□□□ -2.03
HMGN4-202ENST00000477243 ERGIC3Q9Y282 383 aa2.37□□□□□ -2.03
HMGN4-202ENST00000477243 ABCC12Q96J65 1359 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 ARFGEF2Q9Y6D5 1785 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 NOTCH4Q99466 2003 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 IGHV2OR16-5A0A0B4J2B6 119 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 LOC100131303A0A0U1RQF7 123 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 SMIM35A0A1B0GVV1 85 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 TRABD2BA6NFA1 517 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 MSGN1A6NI15 193 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 ZNF233A6NK53 670 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 ANKRD65E5RJM6 399 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 F5H5K5 113 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 NPIPB9F8W1W9 429 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 RAD1O60671 282 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 CTNSO60931 367 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 ICOSLGO75144 302 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 FRAT2O75474 233 aaPredicted RBP2.36□□□□□ -2.03
HMGN4-202ENST00000477243 SUPT3HO75486 399 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 UPK1BO75841 260 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 SOX14O95416 240 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 SLC2A10O95528 541 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 TTC4O95801 387 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 CLDN1O95832 211 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 PTHP01270 115 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 HOXC4P09017 264 aaPredicted RBP2.36□□□□□ -2.03
HMGN4-202ENST00000477243 ZDHHC11BP0C7U3 371 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 S100A1P23297 94 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 MYL9P24844 172 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 PSMB9P28065 219 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 HTR1EP28566 365 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 GABRA4P48169 554 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 FABP6P51161 128 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 AQP5P55064 265 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 DLX1P56177 255 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 RAB25P57735 213 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 OR12D2P58182 307 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 ERVPABLB-1P60509 514 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 PPP1CBP62140 327 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 SNRPD1P62314 119 aaKnown RBP2.36□□□□□ -2.03
HMGN4-202ENST00000477243 SLC25A11Q02978 314 aaKnown RBP2.36□□□□□ -2.03
HMGN4-202ENST00000477243 FCHO2Q0JRZ9 810 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 P2RY6Q15077 328 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 TRIP6Q15654 476 aaKnown RBP2.36□□□□□ -2.03
HMGN4-202ENST00000477243 SLC1A5Q15758 541 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 TECRLQ5HYJ1 363 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 TEX30Q5JUR7 227 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 ACER2Q5QJU3 275 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 MUC21Q5SSG8 566 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 SYT6Q5T7P8 510 aaPredicted RBP2.36□□□□□ -2.03
HMGN4-202ENST00000477243 SAXO2Q658L1 398 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 ZNF626Q68DY1 528 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 TMEM42Q69YG0 159 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 SYCE2Q6PIF2 218 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 SPSB3Q6PJ21 355 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 DHRS4L2Q6PKH6 230 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 SPNS3Q6ZMD2 512 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 DNM1P46Q6ZS02 220 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 FAM92BQ6ZTR7 304 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 PRSS41Q7RTY9 318 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 PIM3Q86V86 326 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 CPNE9Q8IYJ1 553 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 PRR22Q8IZ63 422 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 PUSL1Q8N0Z8 303 aaKnown RBP2.36□□□□□ -2.03
HMGN4-202ENST00000477243 GPD1LQ8N335 351 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 CBR4Q8N4T8 237 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 ATPAF2Q8N5M1 289 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 TMEM105Q8N8V8 129 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 C12orf29Q8N999 325 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 TMEM35BQ8NCS4 154 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 OR52B6Q8NGF0 335 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 OR10G7Q8NGN6 311 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 OR2T11Q8NH01 316 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 OR2T6Q8NHC8 308 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 STOML3Q8TAV4 291 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 ACTRT1Q8TDG2 376 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 MRGPRDQ8TDS7 321 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 ZMYND19Q96E35 227 aaPredicted RBP2.36□□□□□ -2.03
HMGN4-202ENST00000477243 SMIM12Q96EX1 92 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 MRAP2Q96G30 205 aa2.36□□□□□ -2.03
HMGN4-202ENST00000477243 ST6GAL2Q96JF0 529 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms