RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 OR5V1Q9UGF6 321 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 IL19Q9UHD0 177 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 DAPK2Q9UIK4 370 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 ING4Q9UNL4 249 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 NOP16Q9Y3C1 178 aaKnown RBP5.03□□□□□ -1.6
USP39-213ENST00000467885 A3GALT2U3KPV4 340 aa5.03□□□□□ -1.6
USP39-213ENST00000467885 SPTAN1Q13813 2472 aaKnown RBP5.02□□□□□ -1.61
USP39-213ENST00000467885 DCHS2Q6V1P9 2916 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 IGHV3-64DA0A0J9YX35 117 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 PLSCR5A0PG75 271 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 ANXA2P2A6NMY6 339 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 TMEM14DPA8MWL7 114 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 MAGEB3O15480 346 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 SPRY1O43609 319 aaPredicted RBP5.02□□□□□ -1.61
USP39-213ENST00000467885 ANGPTL7O43827 346 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 HPXP02790 462 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 SFTPBP07988 381 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 ERCC1P07992 297 aaPredicted RBP5.02□□□□□ -1.61
USP39-213ENST00000467885 HCKP08631 526 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 CALCBP10092 127 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 HTR2CP28335 458 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 TNFSF8P32971 234 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 HAAOP46952 286 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 OR3A4PP47883 348 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 TMEM50BP56557 158 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 CCL8P80075 99 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 TNP2Q05952 138 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 IL24Q13007 206 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 DYNC1I2Q13409 638 aaKnown RBP5.02□□□□□ -1.61
USP39-213ENST00000467885 P2RY14Q15391 338 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 CNN3Q15417 329 aaKnown RBP5.02□□□□□ -1.61
USP39-213ENST00000467885 DGUOKQ16854 277 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 NKPD1Q17RQ9 610 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 HES5Q5TA89 166 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 DDI2Q5TDH0 399 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 ELP2Q6IA86 826 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 OR10K2Q6IF99 312 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 GLIPR1L1Q6UWM5 242 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 MKXQ8IYA7 352 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 FAM89BQ8N5H3 189 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 JAGN1Q8N5M9 183 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 NKAIN3Q8N8D7 197 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 TMEM104Q8NE00 496 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 OR10AD1Q8NGE0 317 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 OR8S1Q8NH09 359 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 ZNF671Q8TAW3 534 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 ITLN1Q8WWA0 313 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 ACOT12Q8WYK0 555 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 RFT1Q96AA3 541 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 ELMOD3Q96FG2 381 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 BORCS8Q96FH0 119 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 SORCS2Q96PQ0 1159 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 OR2V2Q96R30 315 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 DCUN1D5Q9BTE7 237 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 RTL8AQ9BWD3 113 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 PKIBQ9C010 78 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 CLEC4MQ9H2X3 399 aaPredicted RBP5.02□□□□□ -1.61
USP39-213ENST00000467885 MMP27Q9H306 513 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 PLEKHA1Q9HB21 404 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 GCM1Q9NP62 436 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 ABCB9Q9NP78 766 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 TPSG1Q9NRR2 321 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 C14orf119Q9NWQ9 140 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 ABRACLQ9P1F3 81 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 FBLN5Q9UBX5 448 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 STEAP1Q9UHE8 339 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 SPATA2Q9UM82 520 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 LAMP3Q9UQV4 416 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 SPTBN1Q01082 2364 aaKnown RBP5.02□□□□□ -1.61
USP39-213ENST00000467885 HELZ2Q9BYK8 2649 aaKnown RBP5.02□□□□□ -1.61
USP39-213ENST00000467885 LRBAP50851 2863 aa5.02□□□□□ -1.61
USP39-213ENST00000467885 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.01□□□□□ -1.61
USP39-213ENST00000467885 TMEM272A0A1B0GTI8 110 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 A0A1W2PP11 408 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 LRP5LA4QPB2 252 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 TMEM210A6NLX4 147 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 LYNX1G3V0Z9 82 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.01□□□□□ -1.61
USP39-213ENST00000467885 H7C417 338 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 M0R233 179 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 NDUFS7O75251 213 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 KDM4BO94953 1096 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 LYNX1P0DP58 116 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 ARSBP15848 533 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 ELK1P19419 428 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 AMY2BP19961 511 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 CD33P20138 364 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 SOX6P35712 828 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 SRP9P49458 86 aaKnown RBP5.01□□□□□ -1.61
USP39-213ENST00000467885 PPOXP50336 477 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 EFNB2P52799 333 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 TNFAIP6P98066 277 aaPredicted RBP5.01□□□□□ -1.61
USP39-213ENST00000467885 HOXA4Q00056 320 aaPredicted RBP5.01□□□□□ -1.61
USP39-213ENST00000467885 UNC119Q13432 240 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 RAB11BQ15907 218 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 PCGF3Q3KNV8 242 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 ZNF404Q494X3 552 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 FAM209AQ5JX71 171 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 PRAMEF6Q5VXH4 476 aa5.01□□□□□ -1.61
USP39-213ENST00000467885 HAGHLQ6PII5 290 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms