RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 ZNF701M0R085 212 aaPredicted RBP9.9□□□□□ -0.82
VPS52-213ENST00000461743 SLC1A7O00341 560 aa9.9□□□□□ -0.82
VPS52-213ENST00000461743 MYL12BO14950 172 aa9.9□□□□□ -0.82
VPS52-213ENST00000461743 NOS1APO75052 506 aaPredicted RBP9.9□□□□□ -0.82
VPS52-213ENST00000461743 ZNF205O95201 554 aa9.9□□□□□ -0.82
VPS52-213ENST00000461743 ACAA1P09110 424 aaPredicted RBP9.9□□□□□ -0.82
VPS52-213ENST00000461743 EGR1P18146 543 aa9.9□□□□□ -0.82
VPS52-213ENST00000461743 SRD5A1P18405 259 aa9.9□□□□□ -0.82
VPS52-213ENST00000461743 ETV1P50549 477 aa9.9□□□□□ -0.82
VPS52-213ENST00000461743 FUT6P51993 359 aa9.9□□□□□ -0.82
VPS52-213ENST00000461743 HNRNPA0Q13151 305 aaKnown RBP9.9□□□□□ -0.82
VPS52-213ENST00000461743 CDK5R1Q15078 307 aa9.9□□□□□ -0.82
VPS52-213ENST00000461743 SMIM21Q3B7S5 101 aa9.9□□□□□ -0.82
VPS52-213ENST00000461743 FAM201AQ5SY85 155 aa9.9□□□□□ -0.82
VPS52-213ENST00000461743 RNLSQ5VYX0 342 aa9.9□□□□□ -0.82
VPS52-213ENST00000461743 LAIR2Q6ISS4 152 aa9.9□□□□□ -0.82
VPS52-213ENST00000461743 SLC36A1Q7Z2H8 476 aa9.9□□□□□ -0.82
VPS52-213ENST00000461743 FAM90A1Q86YD7 464 aa9.9□□□□□ -0.82
VPS52-213ENST00000461743 OR5AK2Q8NH90 309 aa9.9□□□□□ -0.82
VPS52-213ENST00000461743 AQP3Q92482 292 aa9.9□□□□□ -0.82
VPS52-213ENST00000461743 GGHQ92820 318 aa9.9□□□□□ -0.82
VPS52-213ENST00000461743 RPL3LQ92901 407 aaKnown RBP9.9□□□□□ -0.82
VPS52-213ENST00000461743 SPSB1Q96BD6 273 aa9.9□□□□□ -0.82
VPS52-213ENST00000461743 SMIM19Q96E16 107 aa9.9□□□□□ -0.82
VPS52-213ENST00000461743 LPAR2Q9HBW0 351 aa9.9□□□□□ -0.82
VPS52-213ENST00000461743 ATRQ13535 2644 aa9.89□□□□□ -0.83
VPS52-213ENST00000461743 TRBV2A0A0J9YWF9 115 aa9.89□□□□□ -0.83
VPS52-213ENST00000461743 TNFRSF13BO14836 293 aaPredicted RBP9.89□□□□□ -0.83
VPS52-213ENST00000461743 GPR37O15354 613 aa9.89□□□□□ -0.83
VPS52-213ENST00000461743 XPNPEP2O43895 674 aa9.89□□□□□ -0.83
VPS52-213ENST00000461743 ALX3O95076 343 aa9.89□□□□□ -0.83
VPS52-213ENST00000461743 ZFPL1O95159 310 aa9.89□□□□□ -0.83
VPS52-213ENST00000461743 IFNA2P01563 188 aa9.89□□□□□ -0.83
VPS52-213ENST00000461743 MT-ND2P03891 347 aa9.89□□□□□ -0.83
VPS52-213ENST00000461743 PGA5P0DJD9 388 aa9.89□□□□□ -0.83
VPS52-213ENST00000461743 PPIAL4GP0DN37 164 aa9.89□□□□□ -0.83
VPS52-213ENST00000461743 PRKACBP22694 351 aa9.89□□□□□ -0.83
VPS52-213ENST00000461743 HAAOP46952 286 aa9.89□□□□□ -0.83
VPS52-213ENST00000461743 LCN2P80188 198 aa9.89□□□□□ -0.83
VPS52-213ENST00000461743 IL24Q13007 206 aa9.89□□□□□ -0.83
VPS52-213ENST00000461743 C6orf141Q5SZD1 244 aa9.89□□□□□ -0.83
VPS52-213ENST00000461743 ATPAF1Q5TC12 328 aaPredicted RBP9.89□□□□□ -0.83
VPS52-213ENST00000461743 CD276Q5ZPR3 534 aa9.89□□□□□ -0.83
VPS52-213ENST00000461743 WDR25Q64LD2 544 aaPredicted RBP9.89□□□□□ -0.83
VPS52-213ENST00000461743 STUMQ69YW2 141 aa9.89□□□□□ -0.83
VPS52-213ENST00000461743 SFRP4Q6FHJ7 346 aaPredicted RBP9.89□□□□□ -0.83
VPS52-213ENST00000461743 HAGHLQ6PII5 290 aaPredicted RBP9.89□□□□□ -0.83
VPS52-213ENST00000461743 LHFPL2Q6ZUX7 228 aa9.89□□□□□ -0.83
VPS52-213ENST00000461743 AHSA2Q719I0 299 aa9.89□□□□□ -0.83
VPS52-213ENST00000461743 STX19Q8N4C7 294 aa9.89□□□□□ -0.83
VPS52-213ENST00000461743 BOLLQ8N9W6 283 aaKnown RBP9.89□□□□□ -0.83
VPS52-213ENST00000461743 POC1AQ8NBT0 407 aa9.89□□□□□ -0.83
VPS52-213ENST00000461743 BPIFB6Q8NFQ5 453 aa9.89□□□□□ -0.83
VPS52-213ENST00000461743 OR13C3Q8NGS6 347 aa9.89□□□□□ -0.83
VPS52-213ENST00000461743 BORCS8Q96FH0 119 aa9.89□□□□□ -0.83
VPS52-213ENST00000461743 CPNE2Q96FN4 548 aaPredicted RBP9.89□□□□□ -0.83
VPS52-213ENST00000461743 DMRTB1Q96MA1 342 aa9.89□□□□□ -0.83
VPS52-213ENST00000461743 SCN3BQ9NY72 215 aa9.89□□□□□ -0.83
VPS52-213ENST00000461743 DNAJB11Q9UBS4 358 aa9.89□□□□□ -0.83
VPS52-213ENST00000461743 IGHV2-70DA0A0C4DH43 119 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 ADAM20O43506 726 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 ENSAO43768 121 aaKnown RBP9.88□□□□□ -0.83
VPS52-213ENST00000461743 ECDO95905 644 aaPredicted RBP9.88□□□□□ -0.83
VPS52-213ENST00000461743 GYPAP02724 150 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 CD2P06729 351 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 GLRA1P23415 457 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 ZFP36P26651 326 aaKnown RBP9.88□□□□□ -0.83
VPS52-213ENST00000461743 RBP2P50120 134 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 ATP1B3P54709 279 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 WNT4P56705 351 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 SEC61A1P61619 476 aaKnown RBP9.88□□□□□ -0.83
VPS52-213ENST00000461743 BDH1Q02338 343 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 PAX2Q02962 417 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 UBE2V2Q15819 145 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 OR2G6Q5TZ20 316 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 BTNL3Q6UXE8 466 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 ZNF841Q6ZN19 808 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 C1QL2Q7Z5L3 287 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 Q8IYB0 196 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 RDH10Q8IZV5 341 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 PARP16Q8N5Y8 322 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 ZNF485Q8NCK3 441 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 DEFB108BQ8NET1 73 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 GPR148Q8TDV2 347 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 TSEN15Q8WW01 171 aaKnown RBP9.88□□□□□ -0.83
VPS52-213ENST00000461743 THRSPQ92748 146 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 MYDGFQ969H8 173 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 DACT3Q96B18 629 aaPredicted RBP9.88□□□□□ -0.83
VPS52-213ENST00000461743 TMIGD2Q96BF3 282 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 ADAT3Q96EY9 351 aaPredicted RBP9.88□□□□□ -0.83
VPS52-213ENST00000461743 MRI1Q9BV20 369 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 MND1Q9BWT6 205 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 TMPRSS13Q9BYE2 586 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 METTL17Q9H7H0 456 aaPredicted RBP9.88□□□□□ -0.83
VPS52-213ENST00000461743 BABAM2Q9NXR7 383 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 NLKQ9UBE8 527 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 CTSZQ9UBR2 303 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 DHDHQ9UQ10 334 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 ERGIC3Q9Y282 383 aa9.88□□□□□ -0.83
VPS52-213ENST00000461743 TPRKBQ9Y3C4 175 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms