RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 POC1AQ8NBT0 407 aa9.41□□□□□ -0.9
HCFC1-204ENST00000461098 ZNF671Q8TAW3 534 aa9.41□□□□□ -0.9
HCFC1-204ENST00000461098 ATP6V1G3Q96LB4 118 aa9.41□□□□□ -0.9
HCFC1-204ENST00000461098 MCRIP2Q9BUT9 160 aaKnown RBP9.41□□□□□ -0.9
HCFC1-204ENST00000461098 LIN7BQ9HAP6 207 aa9.41□□□□□ -0.9
HCFC1-204ENST00000461098 DCAF13Q9NV06 445 aaKnown RBP9.41□□□□□ -0.9
HCFC1-204ENST00000461098 INTS9Q9NV88 658 aaKnown RBP9.41□□□□□ -0.9
HCFC1-204ENST00000461098 IL20Q9NYY1 176 aa9.41□□□□□ -0.9
HCFC1-204ENST00000461098 CDH10Q9Y6N8 788 aa9.41□□□□□ -0.9
HCFC1-204ENST00000461098 MINOS1-NBL1R4GNA1 71 aa9.41□□□□□ -0.9
HCFC1-204ENST00000461098 SLC1A7O00341 560 aa9.4□□□□□ -0.9
HCFC1-204ENST00000461098 PGA5P0DJD9 388 aa9.4□□□□□ -0.9
HCFC1-204ENST00000461098 ZNF728P0DKX0 622 aa9.4□□□□□ -0.9
HCFC1-204ENST00000461098 DYNC1I2Q13409 638 aaKnown RBP9.4□□□□□ -0.9
HCFC1-204ENST00000461098 CGB2Q6NT52 195 aa9.4□□□□□ -0.9
HCFC1-204ENST00000461098 HAGHLQ6PII5 290 aaPredicted RBP9.4□□□□□ -0.9
HCFC1-204ENST00000461098 OSR2Q8N2R0 312 aa9.4□□□□□ -0.9
HCFC1-204ENST00000461098 OR8B12Q8NGG6 310 aa9.4□□□□□ -0.9
HCFC1-204ENST00000461098 OR5A2Q8NGI9 324 aa9.4□□□□□ -0.9
HCFC1-204ENST00000461098 OR4Q3Q8NH05 313 aa9.4□□□□□ -0.9
HCFC1-204ENST00000461098 GNPDA2Q8TDQ7 276 aa9.4□□□□□ -0.9
HCFC1-204ENST00000461098 PRR25Q96S07 402 aa9.4□□□□□ -0.9
HCFC1-204ENST00000461098 ZNF649Q9BS31 505 aa9.4□□□□□ -0.9
HCFC1-204ENST00000461098 C1orf21Q9H246 121 aa9.4□□□□□ -0.9
HCFC1-204ENST00000461098 HES4Q9HCC6 221 aa9.4□□□□□ -0.9
HCFC1-204ENST00000461098 TBC1D23Q9NUY8 699 aa9.4□□□□□ -0.9
HCFC1-204ENST00000461098 VNN3Q9NY84 501 aa9.4□□□□□ -0.9
HCFC1-204ENST00000461098 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.4□□□□□ -0.9
HCFC1-204ENST00000461098 IGHV2-26A0A0B4J1V2 119 aa9.39□□□□□ -0.91
HCFC1-204ENST00000461098 K7N7A8 449 aa9.39□□□□□ -0.91
HCFC1-204ENST00000461098 SLC22A2O15244 555 aa9.39□□□□□ -0.91
HCFC1-204ENST00000461098 RAMP3O60896 148 aa9.39□□□□□ -0.91
HCFC1-204ENST00000461098 NOS1APO75052 506 aaPredicted RBP9.39□□□□□ -0.91
HCFC1-204ENST00000461098 SMIM11AP58511 58 aa9.39□□□□□ -0.91
HCFC1-204ENST00000461098 ACTA2P62736 377 aa9.39□□□□□ -0.91
HCFC1-204ENST00000461098 RPL23AP62750 156 aaKnown RBP9.39□□□□□ -0.91
HCFC1-204ENST00000461098 ACTG2P63267 376 aa9.39□□□□□ -0.91
HCFC1-204ENST00000461098 ACTC1P68032 377 aa9.39□□□□□ -0.91
HCFC1-204ENST00000461098 ACTA1P68133 377 aa9.39□□□□□ -0.91
HCFC1-204ENST00000461098 KRT72Q14CN4 511 aa9.39□□□□□ -0.91
HCFC1-204ENST00000461098 SMIM21Q3B7S5 101 aa9.39□□□□□ -0.91
HCFC1-204ENST00000461098 UNQ9370/PRO34162Q6UXP9 181 aa9.39□□□□□ -0.91
HCFC1-204ENST00000461098 C8orf86Q6ZUL3 223 aa9.39□□□□□ -0.91
HCFC1-204ENST00000461098 OR2W3Q7Z3T1 314 aa9.39□□□□□ -0.91
HCFC1-204ENST00000461098 OR51D1Q8NGF3 324 aa9.39□□□□□ -0.91
HCFC1-204ENST00000461098 OR4P4Q8NGL7 312 aa9.39□□□□□ -0.91
HCFC1-204ENST00000461098 OR6K6Q8NGW6 343 aa9.39□□□□□ -0.91
HCFC1-204ENST00000461098 OR6N2Q8NGY6 317 aa9.39□□□□□ -0.91
HCFC1-204ENST00000461098 RBM14Q96PK6 669 aaKnown RBP9.39□□□□□ -0.91
HCFC1-204ENST00000461098 HIST1H2AAQ96QV6 131 aa9.39□□□□□ -0.91
HCFC1-204ENST00000461098 HOPXQ9BPY8 73 aaPredicted RBP9.39□□□□□ -0.91
HCFC1-204ENST00000461098 NRIP2Q9BQI9 281 aa9.39□□□□□ -0.91
HCFC1-204ENST00000461098 BTBD10Q9BSF8 475 aa9.39□□□□□ -0.91
HCFC1-204ENST00000461098 MRGBPQ9NV56 204 aa9.39□□□□□ -0.91
HCFC1-204ENST00000461098 HHLA2Q9UM44 414 aa9.39□□□□□ -0.91
HCFC1-204ENST00000461098 ZNF737O75373 536 aa9.38□□□□□ -0.91
HCFC1-204ENST00000461098 OR2F2O95006 317 aa9.38□□□□□ -0.91
HCFC1-204ENST00000461098 SNRNP70P08621 437 aaKnown RBP9.38□□□□□ -0.91
HCFC1-204ENST00000461098 H2BFMP0C1H6 154 aa9.38□□□□□ -0.91
HCFC1-204ENST00000461098 RRM2P31350 389 aa9.38□□□□□ -0.91
HCFC1-204ENST00000461098 MYCNOSP40205 109 aa9.38□□□□□ -0.91
HCFC1-204ENST00000461098 SF3A3Q12874 501 aaKnown RBP eCLIP9.38□□□□□ -0.912e-19■■■□□ 16.4
HCFC1-204ENST00000461098 DOC2BQ14184 412 aa9.38□□□□□ -0.91
HCFC1-204ENST00000461098 GLYATQ6IB77 296 aa9.38□□□□□ -0.91
HCFC1-204ENST00000461098 TRPM8Q7Z2W7 1104 aa9.38□□□□□ -0.91
HCFC1-204ENST00000461098 ZNF329Q86UD4 541 aa9.38□□□□□ -0.91
HCFC1-204ENST00000461098 ERI1Q8IV48 349 aaKnown RBP9.38□□□□□ -0.91
HCFC1-204ENST00000461098 BATF2Q8N1L9 274 aa9.38□□□□□ -0.91
HCFC1-204ENST00000461098 OR52L1Q8NGH7 329 aa9.38□□□□□ -0.91
HCFC1-204ENST00000461098 BCAS4Q8TDM0 211 aa9.38□□□□□ -0.91
HCFC1-204ENST00000461098 DUX3Q96PT4 197 aa9.38□□□□□ -0.91
HCFC1-204ENST00000461098 INTS14Q96SY0 518 aa9.38□□□□□ -0.91
HCFC1-204ENST00000461098 KCTD14Q9BQ13 255 aaPredicted RBP9.38□□□□□ -0.91
HCFC1-204ENST00000461098 SLC25A33Q9BSK2 321 aa9.38□□□□□ -0.91
HCFC1-204ENST00000461098 ABCD2Q9UBJ2 740 aa9.38□□□□□ -0.91
HCFC1-204ENST00000461098 ZMAT5Q9UDW3 170 aaKnown RBP9.38□□□□□ -0.91
HCFC1-204ENST00000461098 SAMD4AQ9UPU9 718 aaKnown RBP9.38□□□□□ -0.91
HCFC1-204ENST00000461098 PSMB11A5LHX3 300 aa9.37□□□□□ -0.91
HCFC1-204ENST00000461098 OR5B21A6NL26 309 aa9.37□□□□□ -0.91
HCFC1-204ENST00000461098 MMP23AO75900 390 aa9.37□□□□□ -0.91
HCFC1-204ENST00000461098 IGLV3-1P01715 115 aa9.37□□□□□ -0.91
HCFC1-204ENST00000461098 CHATP28329 748 aa9.37□□□□□ -0.91
HCFC1-204ENST00000461098 IFNGR2P38484 337 aa9.37□□□□□ -0.91
HCFC1-204ENST00000461098 LUMP51884 338 aaPredicted RBP9.37□□□□□ -0.91
HCFC1-204ENST00000461098 BLVRAP53004 296 aa9.37□□□□□ -0.91
HCFC1-204ENST00000461098 ERVK11-1P61568 191 aa9.37□□□□□ -0.91
HCFC1-204ENST00000461098 RPL13AP3Q6NVV1 102 aa9.37□□□□□ -0.91
HCFC1-204ENST00000461098 BAIAP2L2Q6UXY1 529 aa9.37□□□□□ -0.91
HCFC1-204ENST00000461098 MOB3CQ70IA8 216 aa9.37□□□□□ -0.91
HCFC1-204ENST00000461098 EGFL6Q8IUX8 553 aa9.37□□□□□ -0.91
HCFC1-204ENST00000461098 OR9Q2Q8NGE9 314 aa9.37□□□□□ -0.91
HCFC1-204ENST00000461098 RP9Q8TA86 221 aaKnown RBP9.37□□□□□ -0.91
HCFC1-204ENST00000461098 NDNFQ8TB73 568 aa9.37□□□□□ -0.91
HCFC1-204ENST00000461098 PYURFQ96I23 114 aa9.37□□□□□ -0.91
HCFC1-204ENST00000461098 ZNF714Q96N38 554 aa9.37□□□□□ -0.91
HCFC1-204ENST00000461098 MED20Q9H944 212 aa9.37□□□□□ -0.91
HCFC1-204ENST00000461098 VIPAS39Q9H9C1 493 aa9.37□□□□□ -0.91
HCFC1-204ENST00000461098 OR14J1Q9UGF5 321 aa9.37□□□□□ -0.91
HCFC1-204ENST00000461098 SCOCQ9UIL1 159 aa9.37□□□□□ -0.91
HCFC1-204ENST00000461098 KLHDC2Q9Y2U9 406 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms