RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 ZNF775Q96BV0 537 aaPredicted RBP10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 ZNF837Q96EG3 531 aaPredicted RBP10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 SMIM8Q96KF7 97 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 CNTNAP3BQ96NU0 1288 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 ZPBPQ9BS86 351 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 CNTNAP3Q9BZ76 1288 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 MS4A7Q9GZW8 240 aaPredicted RBP10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 PCDHB16Q9NRJ7 776 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 PLEKHJ1Q9NW61 149 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 SLC39A1Q9NY26 324 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 OR5AC2Q9NZP5 309 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 TIMM10BQ9Y5J6 103 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 NCKAP5O14513 1909 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 IGKV3D-15A0A087WSY6 115 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 IGKV1D-8A0A087WSZ0 117 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 CCDC187A0A096LP49 1063 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 FAM90A10PA6NDY2 464 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 FAM90A18PA6NE21 464 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 FAM90A16PA6NEW6 464 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 MSGN1A6NI15 193 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 FAM90A20PA6NIJ5 464 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 FAM90A8PA6NJQ4 464 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 FAM90A7PA6NKC0 464 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 FAM90A22PA8MWA6 464 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 FAM90A12PA8MX19 464 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 FAM90A5PA8MXJ8 464 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 FAM90A23PA8MXZ1 464 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 SDCBPO00560 298 aaPredicted RBP10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 CDK2AP1O14519 115 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 ATG12O94817 140 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 CFIP05156 583 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 FAM90A15PP0C7V4 464 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 FAM90A13PP0C7W8 464 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 FAM90A14PP0C7W9 464 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 FAM90A24PP0C7X0 464 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 ZNF883P0CG24 379 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 RBMXP38159 391 aaKnown RBP10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 FUT6P51993 359 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 MTCP1P56278 107 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 AIMP2Q13155 320 aaKnown RBP10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 RAB32Q13637 225 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 SRSF7Q16629 238 aaKnown RBP eCLIP10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 EIF5AL1Q6IS14 154 aaKnown RBP10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 AAED1Q7RTV5 226 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 C6orf201Q7Z4U5 140 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 FOXB1Q99853 325 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 LINC00470Q9BZP3 86 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 WNT5BQ9H1J7 359 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 BCO1Q9HAY6 547 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 GPR173Q9NS66 373 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 NECAP2Q9NVZ3 263 aa10.89□□□□□ -0.67
ECHDC1-209ENST00000454591 MYO7BQ6PIF6 2116 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 IGKV1-27A0A075B6S5 117 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 PRSS44E7EML9 344 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 TOR1AO14656 332 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 TPD52L2O43399 206 aaKnown RBP10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 XRCC2O43543 280 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 HTR3BO95264 441 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 APOC3P02656 99 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 SERPINA7P05543 415 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 FCGR3AP08637 254 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 TMEM225BP0DP42 221 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 ZNF708P17019 499 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 ZNF32P17041 273 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 NTF4P34130 210 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 GFRA1P56159 465 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 Q0VFX4 171 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 SSPNQ14714 243 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 RSU1Q15404 277 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 MST1LQ2TV78 715 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 PABPC1L2AQ5JQF8 200 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 NKAPLQ5M9Q1 402 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 ATRAIDQ6UW56 229 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 UNQ6126/PRO20091Q6UXV3 157 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 DBX2Q6ZNG2 339 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 Q6ZS49 121 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 COLCA1Q6ZS62 124 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 SGPP2Q8IWX5 399 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 MAFAQ8NHW3 353 aaPredicted RBP10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 NPRL2Q8WTW4 380 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 CPNE4Q96A23 557 aaPredicted RBP10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 LRRC46Q96FV0 321 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 CYYR1Q96J86 154 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 ZNF2Q9BSG1 426 aaPredicted RBP10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 SUCNR1Q9BXA5 334 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 C1QTNF5Q9BXJ0 243 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 NKX6-2Q9C056 277 aaPredicted RBP10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 OR2H1Q9GZK4 316 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 PRDM14Q9GZV8 571 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 METTL8Q9H825 291 aaKnown RBP10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 GPR35Q9HC97 309 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 C12orf4Q9NQ89 552 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 COQ3Q9NZJ6 369 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 LPAR3Q9UBY5 353 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 TCFL5Q9UL49 500 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 POMT1Q9Y6A1 747 aa10.88□□□□□ -0.67
ECHDC1-209ENST00000454591 NRASP01111 189 aa10.87□□□□□ -0.67
ECHDC1-209ENST00000454591 MMP7P09237 267 aaPredicted RBP10.87□□□□□ -0.67
ECHDC1-209ENST00000454591 OR5H8P0DN80 308 aa10.87□□□□□ -0.67
ECHDC1-209ENST00000454591 HKR1P10072 659 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms