RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 STK11Q15831 433 aa9.28□□□□□ -0.92
PKP4-206ENST00000452162 NKPD1Q17RQ9 610 aa9.28□□□□□ -0.92
PKP4-206ENST00000452162 PNLIPRP3Q17RR3 467 aa9.28□□□□□ -0.92
PKP4-206ENST00000452162 C4orf46Q504U0 113 aa9.28□□□□□ -0.92
PKP4-206ENST00000452162 THOC7Q6I9Y2 204 aaKnown RBP9.28□□□□□ -0.92
PKP4-206ENST00000452162 PLXDC2Q6UX71 529 aa9.28□□□□□ -0.92
PKP4-206ENST00000452162 TNFAIP8L1Q8WVP5 186 aa9.28□□□□□ -0.92
PKP4-206ENST00000452162 SNAPC3Q92966 411 aa9.28□□□□□ -0.92
PKP4-206ENST00000452162 CYYR1Q96J86 154 aa9.28□□□□□ -0.92
PKP4-206ENST00000452162 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.28□□□□□ -0.92
PKP4-206ENST00000452162 GPR173Q9NS66 373 aa9.28□□□□□ -0.92
PKP4-206ENST00000452162 EIF3KQ9UBQ5 218 aaKnown RBP9.28□□□□□ -0.92
PKP4-206ENST00000452162 ERRFI1Q9UJM3 462 aaPredicted RBP9.28□□□□□ -0.92
PKP4-206ENST00000452162 VSIG4Q9Y279 399 aa9.28□□□□□ -0.92
PKP4-206ENST00000452162 PRRG2O14669 202 aa9.28□□□□□ -0.92
PKP4-206ENST00000452162 TSC22D2O75157 780 aa9.28□□□□□ -0.92
PKP4-206ENST00000452162 MRPL33O75394 65 aaKnown RBP9.28□□□□□ -0.92
PKP4-206ENST00000452162 SYNGR4O95473 234 aa9.28□□□□□ -0.92
PKP4-206ENST00000452162 IGHV3-9P01782 118 aa9.28□□□□□ -0.92
PKP4-206ENST00000452162 LCATP04180 440 aa9.28□□□□□ -0.92
PKP4-206ENST00000452162 HRH1P35367 487 aa9.28□□□□□ -0.92
PKP4-206ENST00000452162 MPPED2Q15777 294 aa9.28□□□□□ -0.92
PKP4-206ENST00000452162 SCGB2B2Q4G0G5 96 aa9.28□□□□□ -0.92
PKP4-206ENST00000452162 MED12LQ86YW9 2145 aa9.28□□□□□ -0.92
PKP4-206ENST00000452162 FTMTQ8N4E7 242 aa9.28□□□□□ -0.92
PKP4-206ENST00000452162 SARAFQ96BY9 339 aa9.28□□□□□ -0.92
PKP4-206ENST00000452162 ARHGAP5-AS1Q96IT6 56 aa9.28□□□□□ -0.92
PKP4-206ENST00000452162 TM2D1Q9BX74 207 aa9.28□□□□□ -0.92
PKP4-206ENST00000452162 TMPRSS13Q9BYE2 586 aa9.28□□□□□ -0.92
PKP4-206ENST00000452162 SLC7A10Q9NS82 523 aa9.28□□□□□ -0.92
PKP4-206ENST00000452162 OPN4Q9UHM6 478 aa9.28□□□□□ -0.92
PKP4-206ENST00000452162 ZNF391Q9UJN7 358 aa9.28□□□□□ -0.92
PKP4-206ENST00000452162 PLEKHA6Q9Y2H5 1048 aa9.28□□□□□ -0.92
PKP4-206ENST00000452162 ICE1Q9Y2F5 2266 aa9.28□□□□□ -0.92
PKP4-206ENST00000452162 DOCK7Q96N67 2140 aa9.27□□□□□ -0.92
PKP4-206ENST00000452162 DOPEY1Q5JWR5 2465 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 PLSCR5A0PG75 271 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 RPL36A-HNRNPH2H7BZ11 118 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 SIX6O95475 246 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 ZNF35P13682 527 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 MGMTP16455 207 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 HTR2BP41595 481 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 TSPAN5P62079 268 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 RIPPLY1Q0D2K3 151 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 TMEM42Q69YG0 159 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 TMED4Q7Z7H5 227 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 TUSC5Q8IXB3 177 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 ZNF100Q8IYN0 542 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 RPRMLQ8N4K4 120 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 ZDHHC22Q8N966 263 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 OR51T1Q8NGJ9 327 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 FNDC9Q8TBE3 224 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 SPSB1Q96BD6 273 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 OCSTAMPQ9BR26 566 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 RNF122Q9H9V4 155 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 BCO1Q9HAY6 547 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 PARPBPQ9NWS1 579 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 B3GNT2Q9NY97 397 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 MCTS1Q9ULC4 181 aaKnown RBP9.27□□□□□ -0.93
PKP4-206ENST00000452162 INTS1Q8N201 2190 aaKnown RBP9.27□□□□□ -0.93
PKP4-206ENST00000452162 UTP20O75691 2785 aaKnown RBP9.27□□□□□ -0.93
PKP4-206ENST00000452162 hCG_38984A0A1B0GV85 526 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 ZNF724A8MTY0 619 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 CCL21O00585 134 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 GOSR2O14653 212 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 FARS2O95363 451 aaKnown RBP9.27□□□□□ -0.93
PKP4-206ENST00000452162 RNF224P0DH78 156 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 ZNF81P51508 661 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 ARF1P84077 181 aaKnown RBP9.27□□□□□ -0.93
PKP4-206ENST00000452162 C4orf17Q53FE4 359 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 PABPC1L2AQ5JQF8 200 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 ZBTB37Q5TC79 503 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 DCAF12L2Q5VW00 463 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 ZNF585AQ6P3V2 769 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 TEX261Q6UWH6 196 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 C17orf107Q6ZR85 190 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 OR10K1Q8NGX5 313 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 WDYHV1Q96HA8 205 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 RGCCQ9H4X1 137 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 ATPIF1Q9UII2 106 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 U3KQ87 197 aa9.27□□□□□ -0.93
PKP4-206ENST00000452162 USP9YO00507 2555 aaPredicted RBP9.26□□□□□ -0.93
PKP4-206ENST00000452162 CLEC18AA5D8T8 446 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 OR2AT4A6NND4 320 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 F5H5P2 479 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 ACTL6AO96019 429 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 SERPINA2P20848 420 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 SSTR2P30874 369 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 CASP6P55212 293 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 DHRS2Q13268 280 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 MICBQ29980 383 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 CLEC18BQ6UXF7 455 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 SLC25A42Q86VD7 318 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 C12orf45Q8N5I9 185 aaPredicted RBP9.26□□□□□ -0.93
PKP4-206ENST00000452162 UXS1Q8NBZ7 420 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 CLEC18CQ8NCF0 446 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 CPEB3Q8NE35 698 aaKnown RBP9.26□□□□□ -0.93
PKP4-206ENST00000452162 STEAP2Q8NFT2 490 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 OR8H1Q8NGG4 311 aa9.26□□□□□ -0.93
PKP4-206ENST00000452162 OR4K15Q8NH41 348 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms