RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 NOL11Q9H8H0 719 aaKnown RBP3.69□□□□□ -1.82
SDCBP-205ENST00000447267 BRF2Q9HAW0 419 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 NUDT15Q9NV35 164 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 EIF3KQ9UBQ5 218 aaKnown RBP3.69□□□□□ -1.82
SDCBP-205ENST00000447267 GRHPRQ9UBQ7 328 aa3.69□□□□□ -1.82
SDCBP-205ENST00000447267 TMEM272A0A1B0GTI8 110 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 IQCMA0A1B0GVH7 501 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 GNG14A0A1W2PPG7 69 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 CCDC160A6NGH7 325 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 EVPLLA8MZ36 301 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 FTCDNL1E5RQL4 147 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 LGALS9O00182 355 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 LGALS8O00214 317 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 HSPA12AO43301 675 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 RHBDL1O75783 438 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 UGT2B17O75795 530 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 SULT1C4O75897 302 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 DHFRP00374 187 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 KRT8P05787 483 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 PNMTP11086 282 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 ZNF43P17038 809 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 TSPAN8P19075 237 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 NCF2P19878 526 aaPredicted RBP3.68□□□□□ -1.82
SDCBP-205ENST00000447267 PTBP1P26599 531 aaKnown RBP eCLIP3.68□□□□□ -1.82
SDCBP-205ENST00000447267 MAPK3P27361 379 aaPredicted RBP3.68□□□□□ -1.82
SDCBP-205ENST00000447267 RRM2P31350 389 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 ARRB2P32121 409 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 FUSP35637 526 aaKnown RBP eCLIP3.68□□□□□ -1.82
SDCBP-205ENST00000447267 GGT2P36268 569 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 CDKN2AP42771 156 aaKnown RBP3.68□□□□□ -1.82
SDCBP-205ENST00000447267 RPL5P46777 297 aaKnown RBP3.68□□□□□ -1.82
SDCBP-205ENST00000447267 IDH2P48735 452 aaKnown RBP3.68□□□□□ -1.82
SDCBP-205ENST00000447267 HOXA1P49639 335 aaPredicted RBP3.68□□□□□ -1.82
SDCBP-205ENST00000447267 ENTPD1P49961 510 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 BNIP2Q12982 314 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 MAB21L1Q13394 359 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 NAB1Q13506 487 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 C1DQ13901 141 aaKnown RBP3.68□□□□□ -1.82
SDCBP-205ENST00000447267 LASP1Q14847 261 aaKnown RBP3.68□□□□□ -1.82
SDCBP-205ENST00000447267 MPPED2Q15777 294 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 STX1AQ16623 288 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 PFKFB4Q16877 469 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 GGTA1PQ4G0N0 100 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 ZNF585BQ52M93 769 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 CLEC12AQ5QGZ9 265 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 PRAMEF6Q5VXH4 476 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 PYHIN1Q6K0P9 492 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 SLC16A12Q6ZSM3 486 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 FAM57BQ71RH2 274 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 SZRD1Q7Z422 152 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 DHDDSQ86SQ9 333 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 CATSPERDQ86XM0 798 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 CLIP4Q8N3C7 705 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 SLC22A24Q8N4F4 322 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 DEFB125Q8N687 156 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 ASCC1Q8N9N2 400 aaKnown RBP3.68□□□□□ -1.82
SDCBP-205ENST00000447267 OR7A2PQ8NGA2 310 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 OR1N2Q8NGR9 330 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 MOSPD2Q8NHP6 518 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 STAG3L4Q8TBR4 150 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 TCP10LQ8TDR4 215 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 SELENOMQ8WWX9 145 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 ARPC1AQ92747 370 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 ZNF479Q96JC4 524 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 POM121L2Q96KW2 1035 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 OR5B12Q96R08 314 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 ZNF184Q99676 751 aaPredicted RBP3.68□□□□□ -1.82
SDCBP-205ENST00000447267 MECRQ9BV79 373 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 DPH5Q9H2P9 285 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 C1orf198Q9H425 327 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 SLA2Q9H6Q3 261 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 LZTFL1Q9NQ48 299 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 MAN2C1Q9NTJ4 1040 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 CMTM6Q9NX76 183 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 VPS29Q9UBQ0 182 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 NFU1Q9UMS0 254 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 PRELID3BQ9Y3B1 194 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 FBXO7Q9Y3I1 522 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 SNX13Q9Y5W8 968 aa3.68□□□□□ -1.82
SDCBP-205ENST00000447267 EFCAB10A6NFE3 127 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 H0YAE9 185 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 KPNA4O00629 521 aaPredicted RBP3.67□□□□□ -1.82
SDCBP-205ENST00000447267 NPIPB7O75200 414 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 HLA-DPB1P04440 258 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 IFNA4P05014 189 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 HMGN2P05204 90 aaKnown RBP3.67□□□□□ -1.82
SDCBP-205ENST00000447267 FABP1P07148 127 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 MMP7P09237 267 aaPredicted RBP3.67□□□□□ -1.82
SDCBP-205ENST00000447267 RAB4AP20338 218 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 KITLGP21583 273 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 AHCYP23526 432 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 STOMP27105 288 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 PEX2P28328 305 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 TAGLN2P37802 199 aaKnown RBP3.67□□□□□ -1.82
SDCBP-205ENST00000447267 FRKP42685 505 aaPredicted RBP3.67□□□□□ -1.82
SDCBP-205ENST00000447267 CDX1P47902 265 aaPredicted RBP3.67□□□□□ -1.82
SDCBP-205ENST00000447267 SRP9P49458 86 aaKnown RBP3.67□□□□□ -1.82
SDCBP-205ENST00000447267 RASSF2P50749 326 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 CAPZA1P52907 286 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 ZP1P60852 638 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms