RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 PHIPQ8WWQ0 1821 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 DOCK2Q92608 1830 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 MYO5AQ9Y4I1 1855 aaKnown RBP4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 MYH8P13535 1937 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 LAMA3Q16787 3333 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 BORCS7-ASMTA0A0B4J1R7 106 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 TRBV9A0A0B4J1U6 114 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 TRAV38-1A0A0B4J264 116 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 A0A0B4J2E0 115 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 TINCRA0A1B0GVN0 87 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 A0A1B0GX12 115 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 A0A1W2PRE2 83 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 ANKRD20A5PA0PJZ0 165 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 LRIT2A6NDA9 550 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 TRIM49D1C9J1S8 452 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 USP17L23D6RBM5 183 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 M0R233 179 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 MYL12BO14950 172 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 RGS16O15492 202 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 MPZL2O60487 215 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 ZG16O60844 167 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 NKX2-2O95096 273 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 MT-CO3P00414 261 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 CRYAAP02489 173 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 CRYGDP07320 174 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 CHRM4P08173 479 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 HGFP14210 728 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 ENGP17813 658 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 MYL12AP19105 171 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 TAC1P20366 129 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 PRDX3P30048 256 aaKnown RBP4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 NTSP30990 170 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 GABRA5P31644 462 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 CDAP32320 146 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 DCTP40126 519 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 STC1P52823 247 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 UCP3P55916 312 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 TMPRSS3P57727 454 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 OR10A3P58181 314 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 TAS2R30P59541 319 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 NCS1P62166 190 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 BCL2L1Q07817 233 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 CCNIQ14094 377 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 FZD2Q14332 565 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 ZNF235Q14590 738 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 SNRNP35Q16560 246 aaKnown RBP4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 ACKR1Q16570 336 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 CDKN3Q16667 212 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 ZSWIM7Q19AV6 140 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 RPEL1Q2QD12 228 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 C19orf54Q5BKX5 351 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 ACTL10Q5JWF8 245 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 FAM162BQ5T6X4 162 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 CPTPQ5TA50 214 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 AADACL2Q6P093 401 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 AGTRAPQ6RW13 159 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 BTNL8Q6UX41 500 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 CHMP1BQ7LBR1 199 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 C1QL2Q7Z5L3 287 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 TBC1D26Q86UD7 250 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 CBLN2Q8IUK8 224 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 ZNF439Q8NDP4 499 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 OR52B6Q8NGF0 335 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 OR56A4Q8NGH8 313 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 OR10V1Q8NGI7 309 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 OR13J1Q8NGT2 312 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 OR5K2Q8NHB8 316 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 VN1R17PQ8TDU5 208 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 TFAP2CQ92754 450 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 GGHQ92820 318 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 PTX4Q96A99 478 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 APH1AQ96BI3 265 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 BTF3L4Q96K17 158 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 Q96MF0 132 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 NEDD4LQ96PU5 975 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 GPR22Q99680 433 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 MGLLQ99685 303 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 TIMP4Q99727 224 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 CABLES2Q9BTV7 478 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 DPCDQ9BVM2 203 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 SLC39A8Q9C0K1 460 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 SLIRPQ9GZT3 109 aaKnown RBP4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 NAA50Q9GZZ1 169 aaKnown RBP4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 ZBP1Q9H171 429 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 DEFB129Q9H1M3 183 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 CPVLQ9H3G5 476 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 CDC42EP4Q9H3Q1 356 aaKnown RBP4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 RDH14Q9HBH5 336 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 TAF9BQ9HBM6 251 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 BPIFA1Q9NP55 256 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 PRODH2Q9UF12 536 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 MCTS1Q9ULC4 181 aaKnown RBP4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 KCNS2Q9ULS6 477 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 TNFSF18Q9UNG2 199 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 POLDIP2Q9Y2S7 368 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 FAM96BQ9Y3D0 163 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 TIMM10BQ9Y5J6 103 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 WSB1Q9Y6I7 421 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 ROBO3Q96MS0 1386 aa4.09□□□□□ -1.75
HMGB3P9-201ENST00000441799 NUP98P52948 1817 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms