RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 OR4D9Q8NGE8 314 aa4.32□□□□□ -1.72
LINC00458-202ENST00000427299 OR4C16Q8NGL9 310 aa4.32□□□□□ -1.72
LINC00458-202ENST00000427299 OR5M8Q8NGP6 311 aa4.32□□□□□ -1.72
LINC00458-202ENST00000427299 OR6K3Q8NGY3 331 aa4.32□□□□□ -1.72
LINC00458-202ENST00000427299 ZNF563Q8TA94 476 aa4.32□□□□□ -1.72
LINC00458-202ENST00000427299 METTL21AQ8WXB1 218 aa4.32□□□□□ -1.72
LINC00458-202ENST00000427299 OR1E3Q8WZA6 343 aa4.32□□□□□ -1.72
LINC00458-202ENST00000427299 TMEM106AQ96A25 262 aa4.32□□□□□ -1.72
LINC00458-202ENST00000427299 PTX4Q96A99 478 aa4.32□□□□□ -1.72
LINC00458-202ENST00000427299 FBXO17Q96EF6 278 aa4.32□□□□□ -1.72
LINC00458-202ENST00000427299 C4orf45Q96LM5 186 aa4.32□□□□□ -1.72
LINC00458-202ENST00000427299 SFXN2Q96NB2 322 aa4.32□□□□□ -1.72
LINC00458-202ENST00000427299 NECTIN4Q96NY8 510 aa4.32□□□□□ -1.72
LINC00458-202ENST00000427299 OR6C1Q96RD1 312 aa4.32□□□□□ -1.72
LINC00458-202ENST00000427299 TNFRSF13CQ96RJ3 184 aa4.32□□□□□ -1.72
LINC00458-202ENST00000427299 GAL3ST4Q96RP7 486 aa4.32□□□□□ -1.72
LINC00458-202ENST00000427299 NMNAT3Q96T66 252 aa4.32□□□□□ -1.72
LINC00458-202ENST00000427299 SEC22CQ9BRL7 303 aa4.32□□□□□ -1.72
LINC00458-202ENST00000427299 CHIAQ9BZP6 476 aa4.32□□□□□ -1.72
LINC00458-202ENST00000427299 UBQLN4Q9NRR5 601 aa4.32□□□□□ -1.72
LINC00458-202ENST00000427299 SLC2A8Q9NY64 477 aa4.32□□□□□ -1.72
LINC00458-202ENST00000427299 MBD2Q9UBB5 411 aa4.32□□□□□ -1.72
LINC00458-202ENST00000427299 EPHA6Q9UF33 1036 aa4.32□□□□□ -1.72
LINC00458-202ENST00000427299 OR5V1Q9UGF6 321 aa4.32□□□□□ -1.72
LINC00458-202ENST00000427299 SH3BGRL2Q9UJC5 107 aa4.32□□□□□ -1.72
LINC00458-202ENST00000427299 COPS3Q9UNS2 423 aa4.32□□□□□ -1.72
LINC00458-202ENST00000427299 OR2W1Q9Y3N9 320 aa4.32□□□□□ -1.72
LINC00458-202ENST00000427299 PHF3Q92576 2039 aaKnown RBP4.32□□□□□ -1.72
LINC00458-202ENST00000427299 TNRC6BQ9UPQ9 1833 aaKnown RBP4.32□□□□□ -1.72
LINC00458-202ENST00000427299 RALGAPA1Q6GYQ0 2036 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 TRAV36DV7A0A075B6V5 113 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 A0A0B4J203 849 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 A0A1B0GU03 582 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 TMEM72A0PK05 275 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 METTL21EPA6NDL7 271 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 A6NIZ1 184 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 A8MXK9 166 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 MCRIP1C9JLW8 97 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 SLC31A1O15431 190 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 BCL2L11O43521 198 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 EIF4E2O60573 245 aaKnown RBP4.31□□□□□ -1.72
LINC00458-202ENST00000427299 SDC3O75056 442 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 UPK3AO75631 287 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 OR6A2O95222 327 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 CD8AP01732 235 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 ERCC1P07992 297 aaPredicted RBP4.31□□□□□ -1.72
LINC00458-202ENST00000427299 NMBP08949 121 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 CT62P0C5K7 136 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 ASAH2BP0C7U1 165 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 FAM106CPP0CH98 169 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 GABRA1P14867 456 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 PGCP20142 388 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 MPZP25189 248 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 HTR2CP28335 458 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 CRABP1P29762 137 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 GRPRP30550 384 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 GDI1P31150 447 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 RORAP35398 523 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 CAPZBP47756 277 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 POU3F4P49335 361 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 DAP3P51398 398 aaKnown RBP4.31□□□□□ -1.72
LINC00458-202ENST00000427299 TPMTP51580 245 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 RAP1BP61224 184 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 SNRPEP62304 92 aaKnown RBP4.31□□□□□ -1.72
LINC00458-202ENST00000427299 RAP1AP62834 184 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 ERVK-25P63136 954 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 EIF5AP63241 154 aaKnown RBP4.31□□□□□ -1.72
LINC00458-202ENST00000427299 HTD2P86397 168 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 FLI1Q01543 452 aaPredicted RBP4.31□□□□□ -1.72
LINC00458-202ENST00000427299 GLO1Q04760 184 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 RELQ04864 619 aaPredicted RBP4.31□□□□□ -1.72
LINC00458-202ENST00000427299 RPL18Q07020 188 aaKnown RBP4.31□□□□□ -1.72
LINC00458-202ENST00000427299 FUT7Q11130 342 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 SKP2Q13309 424 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 EIF3IQ13347 325 aaKnown RBP4.31□□□□□ -1.72
LINC00458-202ENST00000427299 TRA2AQ13595 282 aaKnown RBP eCLIP4.31□□□□□ -1.72
LINC00458-202ENST00000427299 TOMM34Q15785 309 aaPredicted RBP4.31□□□□□ -1.72
LINC00458-202ENST00000427299 AARDQ4LEZ3 155 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 LBHQ53QV2 105 aaPredicted RBP4.31□□□□□ -1.72
LINC00458-202ENST00000427299 ZNF684Q5T5D7 378 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 EEF1A1P5Q5VTE0 462 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 LIPNQ5VXI9 398 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 OR5M10Q6IEU7 315 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 STEAP1BQ6NZ63 245 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 FAHD2BQ6P2I3 314 aaPredicted RBP4.31□□□□□ -1.72
LINC00458-202ENST00000427299 ARSKQ6UWY0 536 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 NPSR1Q6W5P4 371 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 NDUFAF7Q7L592 441 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 LRRTM1Q86UE6 522 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 IQCF2Q8IXL9 164 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 ZNF679Q8IYX0 411 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 SLC38A6Q8IZM9 456 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 BCORP1Q8N888 145 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 ZDHHC22Q8N966 263 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 ZBTB44Q8NCP5 570 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 OR5M9Q8NGP3 310 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 OR2G2Q8NGZ5 317 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 OTOSQ8NHW6 89 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 RGP1Q92546 391 aaPredicted RBP4.31□□□□□ -1.72
LINC00458-202ENST00000427299 SLAMF9Q96A28 289 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms