RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 OR2G2Q8NGZ5 317 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 ANGPTL6Q8NI99 470 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 GATAD2BQ8WXI9 593 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 BORCS8Q96FH0 119 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 WDFY2Q96P53 400 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 MBOAT4Q96T53 435 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 DCTN5Q9BTE1 182 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 CHST5Q9GZS9 411 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 VCX3BQ9H321 246 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 LPAR2Q9HBW0 351 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 HES4Q9HCC6 221 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 ERVK13-1Q9NX77 482 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 DCAF16Q9NXF7 216 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 CNOT2Q9NZN8 540 aaKnown RBP5.31□□□□□ -1.56
USP54-202ENST00000413442 RPUSD1Q9UJJ7 312 aaKnown RBP5.31□□□□□ -1.56
USP54-202ENST00000413442 GNG8Q9UK08 70 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 GTF2A1LQ9UNN4 478 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 EXOSC1Q9Y3B2 195 aaKnown RBP5.31□□□□□ -1.56
USP54-202ENST00000413442 ZFHX3Q15911 3703 aa5.31□□□□□ -1.56
USP54-202ENST00000413442 TMEM89A2RUT3 159 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 C5orf63A6NC05 138 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 EFCAB10A6NFE3 127 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 POM121CA8CG34 1229 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 C3orf80F5H4A9 247 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.3□□□□□ -1.56
USP54-202ENST00000413442 J3QLW9 94 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 PSMD9O00233 223 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 MAGEB3O15480 346 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 RPP14O95059 124 aaKnown RBP5.3□□□□□ -1.56
USP54-202ENST00000413442 GYPAP02724 150 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 RBP4P02753 201 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 ALDOBP05062 364 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 OCM2P0CE71 109 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 OCMP0CE72 109 aaPredicted RBP5.3□□□□□ -1.56
USP54-202ENST00000413442 PSG2P11465 335 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 PIPP12273 146 aaPredicted RBP5.3□□□□□ -1.56
USP54-202ENST00000413442 FAHP16930 419 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 ZNF19P17023 458 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 MYL12AP19105 171 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 PRTN3P24158 256 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 EEF1B2P24534 225 aaKnown RBP5.3□□□□□ -1.56
USP54-202ENST00000413442 PRDX2P32119 198 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 HAAOP46952 286 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 TAS2R43P59537 309 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 ERVK11-1P61568 191 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 ADARB1P78563 741 aaKnown RBP5.3□□□□□ -1.56
USP54-202ENST00000413442 MEF2CQ06413 473 aaPredicted RBP5.3□□□□□ -1.56
USP54-202ENST00000413442 DBPQ10586 325 aaPredicted RBP5.3□□□□□ -1.56
USP54-202ENST00000413442 AANATQ16613 207 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 WDR38Q5JTN6 314 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 SPIN3Q5JUX0 258 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 ZNF691Q5VV52 312 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 RNLSQ5VYX0 342 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 SFRP4Q6FHJ7 346 aaPredicted RBP5.3□□□□□ -1.56
USP54-202ENST00000413442 HAGHLQ6PII5 290 aaPredicted RBP5.3□□□□□ -1.56
USP54-202ENST00000413442 ACP7Q6ZNF0 438 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 ZNF826PQ6ZT77 177 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 BTN2A1Q7KYR7 527 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 BCDIN3DQ7Z5W3 292 aaKnown RBP5.3□□□□□ -1.56
USP54-202ENST00000413442 WDR86Q86TI4 376 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 CDH26Q8IXH8 852 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 C8orf59Q8N0T1 100 aaPredicted RBP5.3□□□□□ -1.56
USP54-202ENST00000413442 ZNF676Q8N7Q3 588 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 OR5AK2Q8NH90 309 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 HPSE2Q8WWQ2 592 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 RPL3LQ92901 407 aaKnown RBP5.3□□□□□ -1.56
USP54-202ENST00000413442 UBE2FQ969M7 185 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 RNF166Q96A37 237 aaPredicted RBP5.3□□□□□ -1.56
USP54-202ENST00000413442 SLC25A28Q96A46 364 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 LGALS12Q96DT0 336 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 PELI1Q96FA3 418 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 TMEM80Q96HE8 168 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 MDFIQ99750 246 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 NRIP2Q9BQI9 281 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 DPAGT1Q9H3H5 408 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 NCOR1P1Q9H4R4 102 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 METTL8Q9H825 291 aaKnown RBP5.3□□□□□ -1.56
USP54-202ENST00000413442 HEXA-AS1Q9H8Q6 139 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 PAK1IP1Q9NWT1 392 aaPredicted RBP5.3□□□□□ -1.56
USP54-202ENST00000413442 BABAM2Q9NXR7 383 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 FRRS1LQ9P0K9 344 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 SLC25A10Q9UBX3 287 aaPredicted RBP5.3□□□□□ -1.56
USP54-202ENST00000413442 DIMT1Q9UNQ2 313 aaKnown RBP5.3□□□□□ -1.56
USP54-202ENST00000413442 MXRA5Q9NR99 2828 aa5.3□□□□□ -1.56
USP54-202ENST00000413442 ARHGAP32A7KAX9 2087 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 TRBV2A0A0J9YWF9 115 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 OR4C45A6NMZ5 311 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 SH2D1BO14796 132 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 OGG1O15527 345 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 AKR7A2O43488 359 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 ZNF780AO75290 641 aaPredicted RBP5.29□□□□□ -1.56
USP54-202ENST00000413442 GPX5O75715 221 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 NXPH2O95156 264 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 MMP9P14780 707 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 ZNF20P17024 532 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 ATF1P18846 271 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 LMO1P25800 156 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 ERP29P30040 261 aaKnown RBP5.29□□□□□ -1.56
USP54-202ENST00000413442 CAPGP40121 348 aa5.29□□□□□ -1.56
USP54-202ENST00000413442 UBE2E1P51965 193 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms