RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 TSPAN5P62079 268 aa17.86■□□□□ 0.45
USP39-203ENST00000409470 PPA1Q15181 289 aa17.86■□□□□ 0.45
USP39-203ENST00000409470 C2orf68Q2NKX9 166 aa17.86■□□□□ 0.45
USP39-203ENST00000409470 SLC7A5P1Q8MH63 180 aa17.86■□□□□ 0.45
USP39-203ENST00000409470 OSR2Q8N2R0 312 aa17.86■□□□□ 0.45
USP39-203ENST00000409470 FTMTQ8N4E7 242 aa17.86■□□□□ 0.45
USP39-203ENST00000409470 C12orf45Q8N5I9 185 aaPredicted RBP17.86■□□□□ 0.45
USP39-203ENST00000409470 SLC30A7Q8NEW0 376 aa17.86■□□□□ 0.45
USP39-203ENST00000409470 MAFIPQ8WZ33 124 aa17.86■□□□□ 0.45
USP39-203ENST00000409470 OR2A7Q96R45 310 aa17.86■□□□□ 0.45
USP39-203ENST00000409470 OPA3Q9H6K4 179 aa17.86■□□□□ 0.45
USP39-203ENST00000409470 PCDHB16Q9NRJ7 776 aa17.86■□□□□ 0.45
USP39-203ENST00000409470 ZNF701Q9NV72 531 aaPredicted RBP17.86■□□□□ 0.45
USP39-203ENST00000409470 GVINP1Q7Z2Y8 2422 aa17.86■□□□□ 0.45
USP39-203ENST00000409470 ZFHX4Q86UP3 3567 aa17.86■□□□□ 0.45
USP39-203ENST00000409470 G3V3Q6 166 aa17.86■□□□□ 0.45
USP39-203ENST00000409470 UBE2NP61088 152 aaKnown RBP17.86■□□□□ 0.45
USP39-203ENST00000409470 DHRS2Q13268 280 aa17.86■□□□□ 0.45
USP39-203ENST00000409470 SLC25A42Q86VD7 318 aa17.86■□□□□ 0.45
USP39-203ENST00000409470 ARRDC1Q8N5I2 433 aa17.86■□□□□ 0.45
USP39-203ENST00000409470 ZNF611Q8N823 705 aa17.86■□□□□ 0.45
USP39-203ENST00000409470 TAAR6Q96RI8 345 aa17.86■□□□□ 0.45
USP39-203ENST00000409470 OR51B6Q9H340 312 aa17.86■□□□□ 0.45
USP39-203ENST00000409470 IL36GQ9NZH8 169 aa17.86■□□□□ 0.45
USP39-203ENST00000409470 SLC22A5O76082 557 aa17.85■□□□□ 0.45
USP39-203ENST00000409470 HLA-AP01891 365 aaKnown RBP17.85■□□□□ 0.45
USP39-203ENST00000409470 IGHV1-2P23083 117 aa17.85■□□□□ 0.45
USP39-203ENST00000409470 WNT5AP41221 380 aa17.85■□□□□ 0.45
USP39-203ENST00000409470 TAS2R46P59540 309 aa17.85■□□□□ 0.45
USP39-203ENST00000409470 CALHM1Q8IU99 346 aa17.85■□□□□ 0.45
USP39-203ENST00000409470 ZDHHC23Q8IYP9 409 aa17.85■□□□□ 0.45
USP39-203ENST00000409470 FBXL14Q8N1E6 418 aa17.85■□□□□ 0.45
USP39-203ENST00000409470 TERB2Q8NHR7 220 aa17.85■□□□□ 0.45
USP39-203ENST00000409470 MRPS24Q96EL2 167 aaKnown RBP17.85■□□□□ 0.45
USP39-203ENST00000409470 WBP1Q96G27 269 aa17.85■□□□□ 0.45
USP39-203ENST00000409470 F5H5P2 479 aa17.84■□□□□ 0.45
USP39-203ENST00000409470 CST4P01036 141 aa17.84■□□□□ 0.45
USP39-203ENST00000409470 SFTPBP07988 381 aa17.84■□□□□ 0.45
USP39-203ENST00000409470 ZNF35P13682 527 aa17.84■□□□□ 0.45
USP39-203ENST00000409470 H2BFSP57053 126 aa17.84■□□□□ 0.45
USP39-203ENST00000409470 PIGYQ3MUY2 71 aa17.84■□□□□ 0.45
USP39-203ENST00000409470 SIGIRRQ6IA17 410 aa17.84■□□□□ 0.45
USP39-203ENST00000409470 SLC25A26Q70HW3 274 aa17.84■□□□□ 0.45
USP39-203ENST00000409470 OR5L1Q8NGL2 311 aa17.84■□□□□ 0.45
USP39-203ENST00000409470 MARCH1Q8TCQ1 289 aa17.84■□□□□ 0.45
USP39-203ENST00000409470 EMG1Q92979 244 aaKnown RBP17.84■□□□□ 0.45
USP39-203ENST00000409470 FAAP24Q9BTP7 215 aa17.84■□□□□ 0.45
USP39-203ENST00000409470 COL25A1Q9BXS0 654 aaPredicted RBP17.84■□□□□ 0.45
USP39-203ENST00000409470 PLSCR2Q9NRY7 297 aa17.84■□□□□ 0.45
USP39-203ENST00000409470 CRIM1Q9NZV1 1036 aa17.84■□□□□ 0.45
USP39-203ENST00000409470 CEP250Q9BV73 2442 aa17.84■□□□□ 0.45
USP39-203ENST00000409470 FIGNL2A6NMB9 653 aa17.84■□□□□ 0.45
USP39-203ENST00000409470 GEMIN2O14893 280 aaKnown RBP17.84■□□□□ 0.45
USP39-203ENST00000409470 LYZL6O75951 148 aa17.84■□□□□ 0.45
USP39-203ENST00000409470 TBC1D28Q2M2D7 210 aa17.84■□□□□ 0.45
USP39-203ENST00000409470 CHRFAM7AQ494W8 412 aa17.84■□□□□ 0.45
USP39-203ENST00000409470 IGFL3Q6UXB1 125 aa17.84■□□□□ 0.45
USP39-203ENST00000409470 TMEM17Q86X19 198 aa17.84■□□□□ 0.45
USP39-203ENST00000409470 C9orf106Q8NAJ2 232 aa17.84■□□□□ 0.45
USP39-203ENST00000409470 BHLHE23Q8NDY6 225 aa17.84■□□□□ 0.45
USP39-203ENST00000409470 WNT2BQ93097 391 aa17.84■□□□□ 0.45
USP39-203ENST00000409470 WDR89Q96FK6 387 aaPredicted RBP17.84■□□□□ 0.45
USP39-203ENST00000409470 RADILQ96JH8 1075 aa17.84■□□□□ 0.45
USP39-203ENST00000409470 HSF4Q9ULV5 492 aa17.84■□□□□ 0.45
USP39-203ENST00000409470 ST3GAL6Q9Y274 331 aa17.84■□□□□ 0.45
USP39-203ENST00000409470 A0A1W2PR80 420 aa17.83■□□□□ 0.45
USP39-203ENST00000409470 PQLC2LA1A4F0 135 aa17.83■□□□□ 0.45
USP39-203ENST00000409470 CD300LBA8K4G0 201 aa17.83■□□□□ 0.45
USP39-203ENST00000409470 CD34P28906 385 aa17.83■□□□□ 0.45
USP39-203ENST00000409470 GPM6AP51674 278 aa17.83■□□□□ 0.45
USP39-203ENST00000409470 GUSBP1Q15486 140 aa17.83■□□□□ 0.45
USP39-203ENST00000409470 CEACAM21Q3KPI0 293 aa17.83■□□□□ 0.45
USP39-203ENST00000409470 RPUSD3Q6P087 351 aaKnown RBP17.83■□□□□ 0.45
USP39-203ENST00000409470 ZSCAN4Q8NAM6 433 aaPredicted RBP17.83■□□□□ 0.45
USP39-203ENST00000409470 GPR137Q96N19 417 aa17.83■□□□□ 0.45
USP39-203ENST00000409470 HIST1H2AAQ96QV6 131 aa17.83■□□□□ 0.45
USP39-203ENST00000409470 ZNF581Q9P0T4 197 aa17.83■□□□□ 0.45
USP39-203ENST00000409470 ZNF629Q9UEG4 869 aaPredicted RBP17.83■□□□□ 0.45
USP39-203ENST00000409470 NOP16Q9Y3C1 178 aaKnown RBP17.83■□□□□ 0.45
USP39-203ENST00000409470 AKR1C4P17516 323 aa17.82■□□□□ 0.44
USP39-203ENST00000409470 PPP1R1AQ13522 171 aa17.82■□□□□ 0.44
USP39-203ENST00000409470 MPPED2Q15777 294 aa17.82■□□□□ 0.44
USP39-203ENST00000409470 LGALSLQ3ZCW2 172 aaPredicted RBP17.82■□□□□ 0.44
USP39-203ENST00000409470 DCAF12L2Q5VW00 463 aa17.82■□□□□ 0.44
USP39-203ENST00000409470 ZNF585AQ6P3V2 769 aa17.82■□□□□ 0.44
USP39-203ENST00000409470 Q6ZT83 130 aa17.82■□□□□ 0.44
USP39-203ENST00000409470 RFPL4BQ6ZWI9 263 aa17.82■□□□□ 0.44
USP39-203ENST00000409470 LYG2Q86SG7 212 aa17.82■□□□□ 0.44
USP39-203ENST00000409470 SNIP1Q8TAD8 396 aaKnown RBP17.82■□□□□ 0.44
USP39-203ENST00000409470 ZNF75AQ96N20 296 aa17.82■□□□□ 0.44
USP39-203ENST00000409470 HDHD3Q9BSH5 251 aaPredicted RBP17.82■□□□□ 0.44
USP39-203ENST00000409470 EHFQ9NZC4 300 aa17.82■□□□□ 0.44
USP39-203ENST00000409470 OPN4Q9UHM6 478 aa17.82■□□□□ 0.44
USP39-203ENST00000409470 SDCBPO00560 298 aaPredicted RBP17.82■□□□□ 0.44
USP39-203ENST00000409470 ZBTB25P24278 435 aa17.82■□□□□ 0.44
USP39-203ENST00000409470 CHATP28329 748 aa17.82■□□□□ 0.44
USP39-203ENST00000409470 HAAOP46952 286 aa17.82■□□□□ 0.44
USP39-203ENST00000409470 NPY4RP50391 375 aa17.82■□□□□ 0.44
USP39-203ENST00000409470 ZNF81P51508 661 aa17.82■□□□□ 0.44
USP39-203ENST00000409470 ACSF3Q4G176 576 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms