RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 KCNAB3O43448 404 aa14.65□□□□□ -0.06
NUP50-203ENST00000407019 F10P00742 488 aa14.65□□□□□ -0.06
NUP50-203ENST00000407019 PLATP00750 562 aa14.65□□□□□ -0.06
NUP50-203ENST00000407019 ZNF883P0CG24 379 aa14.65□□□□□ -0.06
NUP50-203ENST00000407019 GFRA1P56159 465 aa14.65□□□□□ -0.06
NUP50-203ENST00000407019 PAN3Q58A45 887 aaKnown RBP14.65□□□□□ -0.06
NUP50-203ENST00000407019 PDSS1Q5T2R2 415 aa14.65□□□□□ -0.06
NUP50-203ENST00000407019 RPUSD3Q6P087 351 aaKnown RBP14.65□□□□□ -0.06
NUP50-203ENST00000407019 UNQ6126/PRO20091Q6UXV3 157 aa14.65□□□□□ -0.06
NUP50-203ENST00000407019 ZSCAN4Q8NAM6 433 aaPredicted RBP14.65□□□□□ -0.06
NUP50-203ENST00000407019 PSMF1Q92530 271 aa14.65□□□□□ -0.06
NUP50-203ENST00000407019 MRPS24Q96EL2 167 aaKnown RBP14.65□□□□□ -0.06
NUP50-203ENST00000407019 PIK3IP1Q96FE7 263 aa14.65□□□□□ -0.06
NUP50-203ENST00000407019 HDHD3Q9BSH5 251 aaPredicted RBP14.65□□□□□ -0.06
NUP50-203ENST00000407019 SHARPINQ9H0F6 387 aa14.65□□□□□ -0.06
NUP50-203ENST00000407019 RGCCQ9H4X1 137 aa14.65□□□□□ -0.06
NUP50-203ENST00000407019 METTL8Q9H825 291 aaKnown RBP14.65□□□□□ -0.06
NUP50-203ENST00000407019 BOKQ9UMX3 212 aaPredicted RBP14.65□□□□□ -0.06
NUP50-203ENST00000407019 NCKAP5O14513 1909 aa14.65□□□□□ -0.06
NUP50-203ENST00000407019 PCSK5Q92824 1860 aa14.65□□□□□ -0.07
NUP50-203ENST00000407019 NRASP01111 189 aa14.64□□□□□ -0.07
NUP50-203ENST00000407019 PRSS12P56730 875 aa14.64□□□□□ -0.07
NUP50-203ENST00000407019 PPIAP62937 165 aaKnown RBP14.64□□□□□ -0.07
NUP50-203ENST00000407019 FOXO1Q12778 655 aa14.64□□□□□ -0.07
NUP50-203ENST00000407019 PLEKHN1Q494U1 663 aaPredicted RBP14.64□□□□□ -0.07
NUP50-203ENST00000407019 TMEM42Q69YG0 159 aa14.64□□□□□ -0.07
NUP50-203ENST00000407019 DBX2Q6ZNG2 339 aa14.64□□□□□ -0.07
NUP50-203ENST00000407019 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.64□□□□□ -0.07
NUP50-203ENST00000407019 ZNF100Q8IYN0 542 aa14.64□□□□□ -0.07
NUP50-203ENST00000407019 TMEM105Q8N8V8 129 aa14.64□□□□□ -0.07
NUP50-203ENST00000407019 FGFBP3Q8TAT2 258 aa14.64□□□□□ -0.07
NUP50-203ENST00000407019 STOML3Q8TAV4 291 aa14.64□□□□□ -0.07
NUP50-203ENST00000407019 ABHD3Q8WU67 409 aa14.64□□□□□ -0.07
NUP50-203ENST00000407019 ZNF845Q96IR2 970 aaPredicted RBP14.64□□□□□ -0.07
NUP50-203ENST00000407019 DDA1Q9BW61 102 aa14.64□□□□□ -0.07
NUP50-203ENST00000407019 LRFN1Q9P244 771 aa14.64□□□□□ -0.07
NUP50-203ENST00000407019 HSF4Q9ULV5 492 aa14.64□□□□□ -0.07
NUP50-203ENST00000407019 EDARQ9UNE0 448 aa14.64□□□□□ -0.07
NUP50-203ENST00000407019 SDK2Q58EX2 2172 aa14.64□□□□□ -0.07
NUP50-203ENST00000407019 MPTX1A8MV57 137 aa14.64□□□□□ -0.07
NUP50-203ENST00000407019 F8VVB4 439 aa14.64□□□□□ -0.07
NUP50-203ENST00000407019 F8VWA3 439 aa14.64□□□□□ -0.07
NUP50-203ENST00000407019 H0YIZ8 118 aa14.64□□□□□ -0.07
NUP50-203ENST00000407019 JMJD7P0C870 316 aa14.64□□□□□ -0.07
NUP50-203ENST00000407019 TAF9Q16594 264 aa14.64□□□□□ -0.07
NUP50-203ENST00000407019 PRSS54Q6PEW0 395 aa14.64□□□□□ -0.07
NUP50-203ENST00000407019 ASCL4Q6XD76 172 aa14.64□□□□□ -0.07
NUP50-203ENST00000407019 SKA3Q8IX90 412 aa14.64□□□□□ -0.07
NUP50-203ENST00000407019 THOC3Q96J01 351 aaKnown RBP14.64□□□□□ -0.07
NUP50-203ENST00000407019 C2orf50Q96LR7 162 aa14.64□□□□□ -0.07
NUP50-203ENST00000407019 MICU1Q9BPX6 476 aa14.64□□□□□ -0.07
NUP50-203ENST00000407019 ZNF2Q9BSG1 426 aaPredicted RBP14.64□□□□□ -0.07
NUP50-203ENST00000407019 ANXA10Q9UJ72 324 aa14.64□□□□□ -0.07
NUP50-203ENST00000407019 hCG_38984A0A1B0GV85 526 aa14.63□□□□□ -0.07
NUP50-203ENST00000407019 LOC105371267A0A1B0GV96 52 aa14.63□□□□□ -0.07
NUP50-203ENST00000407019 KNG1P01042 644 aa14.63□□□□□ -0.07
NUP50-203ENST00000407019 LYL1P12980 280 aa14.63□□□□□ -0.07
NUP50-203ENST00000407019 TPT1P13693 172 aaKnown RBP14.63□□□□□ -0.07
NUP50-203ENST00000407019 MPLP40238 635 aa14.63□□□□□ -0.07
NUP50-203ENST00000407019 ELP2Q6IA86 826 aa14.63□□□□□ -0.07
NUP50-203ENST00000407019 TMEM45BQ96B21 275 aa14.63□□□□□ -0.07
NUP50-203ENST00000407019 RRNAD1Q96FB5 475 aaKnown RBP14.63□□□□□ -0.07
NUP50-203ENST00000407019 FAAP24Q9BTP7 215 aa14.63□□□□□ -0.07
NUP50-203ENST00000407019 TAS2R3Q9NYW6 316 aa14.63□□□□□ -0.07
NUP50-203ENST00000407019 AK3Q9UIJ7 227 aa14.63□□□□□ -0.07
NUP50-203ENST00000407019 LINC01387J3KSC0 135 aa14.62□□□□□ -0.07
NUP50-203ENST00000407019 MSTNO14793 375 aa14.62□□□□□ -0.07
NUP50-203ENST00000407019 FARS2O95363 451 aaKnown RBP14.62□□□□□ -0.07
NUP50-203ENST00000407019 PTGER4P35408 488 aa14.62□□□□□ -0.07
NUP50-203ENST00000407019 FAM3AP98173 230 aa14.62□□□□□ -0.07
NUP50-203ENST00000407019 SPINK14Q6IE38 97 aa14.62□□□□□ -0.07
NUP50-203ENST00000407019 WDFY3Q8IZQ1 3526 aa14.62□□□□□ -0.07
NUP50-203ENST00000407019 STPG2Q8N412 459 aa14.62□□□□□ -0.07
NUP50-203ENST00000407019 DEFB123Q8N688 67 aa14.62□□□□□ -0.07
NUP50-203ENST00000407019 POC1AQ8NBT0 407 aa14.62□□□□□ -0.07
NUP50-203ENST00000407019 OR10C1Q96KK4 312 aa14.62□□□□□ -0.07
NUP50-203ENST00000407019 TERTO14746 1132 aaKnown RBP14.62□□□□□ -0.07
NUP50-203ENST00000407019 IFNA2P01563 188 aa14.62□□□□□ -0.07
NUP50-203ENST00000407019 CTSDP07339 412 aaPredicted RBP14.62□□□□□ -0.07
NUP50-203ENST00000407019 PET100P0DJ07 73 aa14.62□□□□□ -0.07
NUP50-203ENST00000407019 DTYMKP23919 212 aa14.62□□□□□ -0.07
NUP50-203ENST00000407019 CHATP28329 748 aa14.62□□□□□ -0.07
NUP50-203ENST00000407019 RBMXP38159 391 aaKnown RBP14.62□□□□□ -0.07
NUP50-203ENST00000407019 NAAAQ02083 359 aa14.62□□□□□ -0.07
NUP50-203ENST00000407019 ZNF92Q03936 586 aa14.62□□□□□ -0.07
NUP50-203ENST00000407019 CMSS1Q9BQ75 279 aaKnown RBP14.62□□□□□ -0.07
NUP50-203ENST00000407019 FAM173AQ9BQD7 235 aa14.62□□□□□ -0.07
NUP50-203ENST00000407019 SPRY4Q9C004 299 aa14.62□□□□□ -0.07
NUP50-203ENST00000407019 OR5AC2Q9NZP5 309 aa14.62□□□□□ -0.07
NUP50-203ENST00000407019 GLS2Q9UI32 602 aa14.62□□□□□ -0.07
NUP50-203ENST00000407019 SLC7A11Q9UPY5 501 aa14.62□□□□□ -0.07
NUP50-203ENST00000407019 MEMO1Q9Y316 297 aa14.62□□□□□ -0.07
NUP50-203ENST00000407019 C9orf172C9J069 976 aa14.61□□□□□ -0.07
NUP50-203ENST00000407019 XRCC2O43543 280 aa14.61□□□□□ -0.07
NUP50-203ENST00000407019 HOXB5P09067 269 aa14.61□□□□□ -0.07
NUP50-203ENST00000407019 MMP7P09237 267 aaPredicted RBP14.61□□□□□ -0.07
NUP50-203ENST00000407019 FUT6P51993 359 aa14.61□□□□□ -0.07
NUP50-203ENST00000407019 OR8B8Q15620 311 aa14.61□□□□□ -0.07
NUP50-203ENST00000407019 ARRDC1-AS1Q9H2J1 176 aa14.61□□□□□ -0.07
NUP50-203ENST00000407019 C1orf123Q9NWV4 160 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 241.7 ms