RNA–Protein interactions for RNA: ENST00000396595.7

LIMCH1-203, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-203ENST00000396595 NCBP2LA6PVI3 153 aaKnown RBP9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 HLA-BQ31612 363 aa9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 MIDNQ504T8 468 aa9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 DUSP18Q8NEJ0 188 aa9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 STARD4Q96DR4 205 aa9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 LILRA5A6NI73 299 aa9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 ZFPL1O95159 310 aa9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 PGA3P0DJD8 388 aa9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 NDFIP1Q9BT67 221 aa9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 PPIL1Q9Y3C6 166 aa9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 A0A1W2PPC4 97 aa9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 HMSDA8MTL9 139 aa9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 PRSS23O95084 383 aa9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 ZGLP1P0C6A0 271 aa9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 AGFG1P52594 562 aaKnown RBP9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 DPPA3Q6W0C5 159 aa9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 MUC20Q8N307 709 aaPredicted RBP9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 KTI12Q96EK9 354 aaPredicted RBP9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 WDR34Q96EX3 536 aa9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 AHDC1Q5TGY3 1603 aaPredicted RBP9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 A0A096LPE4 126 aa9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 A0A1W2PPZ6 126 aa9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 PRKNO60260 465 aaPredicted RBP9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 CST7O76096 145 aa9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 SFT2D2O95562 160 aa9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 CRYAAP02489 173 aa9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 FABP2P12104 132 aa9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 HIST1H1DP16402 221 aaKnown RBP9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 CD82P27701 267 aa9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 ERVFC1-1P60608 527 aa9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 SCGB1D4Q6XE38 83 aa9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 OR10G3Q8NGC4 313 aa9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 RAB24Q969Q5 203 aa9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 LINC00052Q96N35 136 aa9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 PLAC1Q9HBJ0 212 aa9.19□□□□□ -0.94
LIMCH1-203ENST00000396595 LEUTXA8MZ59 168 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 FBP1P09467 338 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 B4GALT1P15291 398 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 OR10X1Q8NGY0 326 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 TIMD4Q96H15 378 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 NPAS1Q99742 590 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 UBE2ZQ9H832 354 aaPredicted RBP9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 HSPB8Q9UJY1 196 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 LAMB1P07942 1786 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 MASP2O00187 686 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 GFERP55789 205 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 DGAT2L6Q6ZPD8 337 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 Q7L0L9 218 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 OR1L3Q8NH93 324 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 SARAFQ96BY9 339 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 RHOVQ96L33 236 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 GPR61Q9BZJ8 451 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 ZNF576Q9H609 170 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 WSB1Q9Y6I7 421 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 H3BP45 60 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 HAND1O96004 215 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 CD96P40200 585 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 AESQ08117 197 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 B3GNTL1Q67FW5 361 aaPredicted RBP9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 APOBEC3DQ96AK3 386 aaPredicted RBP9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 MRPS24Q96EL2 167 aaKnown RBP9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 MSL2Q9HCI7 577 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 ZNF391Q9UJN7 358 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 BRWD1Q9NSI6 2320 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 TMEM272A0A1B0GTI8 110 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 PPP1R1AQ13522 171 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 C6orf201Q7Z4U5 140 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 FBXL14Q8N1E6 418 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 GALMQ96C23 342 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 DOK5Q9P104 306 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 COL16A1Q07092 1604 aaPredicted RBP9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 CTAG2O75638 210 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 CXCL10P02778 98 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 ZBTB25P24278 435 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 CNN1P51911 297 aaKnown RBP9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 PCBP3P57721 371 aaKnown RBP9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 ZNF793Q6ZN11 406 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 HSD17B13Q7Z5P4 300 aaPredicted RBP9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 FAM169BQ8N8A8 192 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 OR2V1Q8NHB1 315 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 SPACA9Q96E40 222 aaPredicted RBP9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 C1QTNF6Q9BXI9 259 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 OR51M1Q9H341 326 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 AP5S1Q9NUS5 200 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 KIAA1456Q9P272 454 aa9.18□□□□□ -0.94
LIMCH1-203ENST00000396595 FCN1O00602 326 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 COMPP49747 757 aaPredicted RBP9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 FUT7Q11130 342 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 SMIM21Q3B7S5 101 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 SAMD13Q5VXD3 122 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 MRM1Q6IN84 353 aaKnown RBP9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 OR52L2PQ8NGH6 319 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 OR1N1Q8NGS0 311 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 OR1F12Q8NHA8 337 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 HES4Q9HCC6 221 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 C20orf141Q9NUB4 165 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 SPRY1O43609 319 aaPredicted RBP9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 C1QAP02745 245 aa9.17□□□□□ -0.94
LIMCH1-203ENST00000396595 PTHLHP12272 177 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms