RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 INO80EQ8NBZ0 244 aaPredicted RBP4.71□□□□□ -1.66
VPS41-203ENST00000395969 OR1J2Q8NGS2 313 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 TECTBQ96PL2 329 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 KLHDC3Q9BQ90 382 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 OR51V1Q9H2C8 321 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 FRRS1LQ9P0K9 344 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 V9GYS6 101 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 ZNF716A6NP11 495 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 NME2P1O60361 137 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 CTAG2O75638 210 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 WNT11O96014 354 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 IL2RAP01589 272 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 HKR1P10072 659 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 PGAM2P15259 253 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 NME2P22392 152 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 EDNRAP25101 427 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 CD34P28906 385 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 CD81P60033 236 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 MRPS34P82930 218 aaKnown RBP4.7□□□□□ -1.66
VPS41-203ENST00000395969 QRFPP83859 136 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 SRSF2Q01130 221 aaKnown RBP4.7□□□□□ -1.66
VPS41-203ENST00000395969 FOXF1Q12946 379 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 SRSF7Q16629 238 aaKnown RBP eCLIP4.7□□□□□ -1.66
VPS41-203ENST00000395969 PHF19Q5T6S3 580 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 KCTD18Q6PI47 426 aaPredicted RBP4.7□□□□□ -1.66
VPS41-203ENST00000395969 BTNL8Q6UX41 500 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 BIVMQ86UB2 503 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 GABRG1Q8N1C3 465 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 PRSS35Q8N3Z0 413 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 PNLDC1Q8NA58 520 aaKnown RBP4.7□□□□□ -1.66
VPS41-203ENST00000395969 TMEM229BQ8NBD8 167 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 OR10R2Q8NGX6 335 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 OR2G2Q8NGZ5 317 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 LYPD6BQ8NI32 183 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 GPX8Q8TED1 209 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 RAB24Q969Q5 203 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 SPSB4Q96A44 273 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 Q96M85 177 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 NMNAT3Q96T66 252 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 SELENOIQ9C0D9 397 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 ZMAT3Q9HA38 289 aaKnown RBP4.7□□□□□ -1.66
VPS41-203ENST00000395969 ASCL3Q9NQ33 180 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 PARPBPQ9NWS1 579 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 KPTNQ9Y664 436 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 RANBP2P49792 3224 aaKnown RBP4.7□□□□□ -1.66
VPS41-203ENST00000395969 SPTBN5Q9NRC6 3674 aaKnown RBP4.7□□□□□ -1.66
VPS41-203ENST00000395969 F5P12259 2224 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 SDK2Q58EX2 2172 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 A0A1B0GV50 99 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 CEACAM18A8MTB9 384 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 FOXI3A8MTJ6 420 aaPredicted RBP4.7□□□□□ -1.66
VPS41-203ENST00000395969 OR2J2O76002 312 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 CST2P09228 141 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 LYL1P12980 280 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 IL11P20809 199 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 TUBG1P23258 451 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 ZBTB25P24278 435 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 TAGLN2P37802 199 aaKnown RBP4.7□□□□□ -1.66
VPS41-203ENST00000395969 MAGEB1P43366 347 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 KIR3DL2P43630 455 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 DVL1P1P54792 670 aaPredicted RBP4.7□□□□□ -1.66
VPS41-203ENST00000395969 GRB2P62993 217 aaKnown RBP4.7□□□□□ -1.66
VPS41-203ENST00000395969 MYBPHQ13203 477 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 OR7A5Q15622 319 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 FAM189A2Q15884 450 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 FAM27BQ5VT28 67 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 LEG1Q6P5S2 330 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 COLCA1Q6ZS62 124 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 TMPRSS7Q7RTY8 843 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 RPS19BP1Q86WX3 136 aaKnown RBP4.7□□□□□ -1.66
VPS41-203ENST00000395969 ZNF433Q8N7K0 673 aaPredicted RBP4.7□□□□□ -1.66
VPS41-203ENST00000395969 ZIC4Q8N9L1 334 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 ZFP62Q8NB50 900 aaPredicted RBP4.7□□□□□ -1.66
VPS41-203ENST00000395969 OR10G3Q8NGC4 313 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 OR4K17Q8NGC6 315 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 ZPLD1Q8TCW7 415 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 TMED6Q8WW62 240 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 HAS2Q92819 552 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 FAM173AQ9BQD7 235 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 DEFB126Q9BYW3 111 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 SLITRK2Q9H156 845 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 ZDHHC11Q9H8X9 412 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 RPS10P5Q9NQ39 176 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 TUBG2Q9NRH3 451 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 GFOD1Q9NXC2 390 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 SLC22A13Q9Y226 551 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 TP53TG5Q9Y2B4 290 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 CBY1Q9Y3M2 126 aa4.7□□□□□ -1.66
VPS41-203ENST00000395969 CHD3Q12873 2000 aaKnown RBP4.7□□□□□ -1.66
VPS41-203ENST00000395969 NSG1A0A0A6YYJ2 146 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 MEIS3P1A6NDR6 274 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 PSMD9O00233 223 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 CCSO14618 274 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 ZNF708P17019 499 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 CRYGSP22914 178 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 GRNP28799 593 aaKnown RBP4.69□□□□□ -1.66
VPS41-203ENST00000395969 HSD11B1P28845 292 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 DDTP30046 118 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 PRKXP51817 358 aa4.69□□□□□ -1.66
VPS41-203ENST00000395969 TAS2R19P59542 299 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms