RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 CACFD1Q9UGQ2 172 aa18.03■□□□□ 0.48
CLK3-202ENST00000395066 MEMO1Q9Y316 297 aa18.03■□□□□ 0.48
CLK3-202ENST00000395066 SGCEO43556 437 aa18.03■□□□□ 0.48
CLK3-202ENST00000395066 DKK1O94907 266 aa18.03■□□□□ 0.48
CLK3-202ENST00000395066 SMIM6P0DI80 62 aa18.03■□□□□ 0.48
CLK3-202ENST00000395066 GLI4P10075 376 aa18.03■□□□□ 0.48
CLK3-202ENST00000395066 MSR1P21757 451 aa18.03■□□□□ 0.48
CLK3-202ENST00000395066 SPEM2Q0P670 501 aa18.03■□□□□ 0.48
CLK3-202ENST00000395066 RAET1LQ5VY80 246 aa18.03■□□□□ 0.48
CLK3-202ENST00000395066 SLC16A13Q7RTY0 426 aa18.03■□□□□ 0.48
CLK3-202ENST00000395066 C20orf196Q8IYI0 205 aa18.03■□□□□ 0.48
CLK3-202ENST00000395066 DNASE2BQ8WZ79 361 aa18.03■□□□□ 0.48
CLK3-202ENST00000395066 ZNF2Q9BSG1 426 aaPredicted RBP18.03■□□□□ 0.48
CLK3-202ENST00000395066 POMT1Q9Y6A1 747 aa18.03■□□□□ 0.48
CLK3-202ENST00000395066 SPRY1O43609 319 aaPredicted RBP18.02■□□□□ 0.48
CLK3-202ENST00000395066 CST4P01036 141 aa18.02■□□□□ 0.48
CLK3-202ENST00000395066 S100A8P05109 93 aa18.02■□□□□ 0.48
CLK3-202ENST00000395066 PRF1P14222 555 aa18.02■□□□□ 0.48
CLK3-202ENST00000395066 CPT2P23786 658 aa18.02■□□□□ 0.48
CLK3-202ENST00000395066 AKR1C3P42330 323 aa18.02■□□□□ 0.48
CLK3-202ENST00000395066 KCNMB1Q16558 191 aa18.02■□□□□ 0.48
CLK3-202ENST00000395066 TMEM268Q5VZI3 342 aa18.02■□□□□ 0.48
CLK3-202ENST00000395066 Q6ZRG5 221 aa18.02■□□□□ 0.48
CLK3-202ENST00000395066 SEMA6DQ8NFY4 1073 aa18.02■□□□□ 0.48
CLK3-202ENST00000395066 SLC39A7Q92504 469 aa18.02■□□□□ 0.48
CLK3-202ENST00000395066 HIST1H2BAQ96A08 127 aa18.02■□□□□ 0.48
CLK3-202ENST00000395066 S100A13Q99584 98 aa18.02■□□□□ 0.48
CLK3-202ENST00000395066 PLA2G2EQ9NZK7 142 aa18.02■□□□□ 0.48
CLK3-202ENST00000395066 C5orf52A6NGY3 159 aa18.02■□□□□ 0.48
CLK3-202ENST00000395066 DHRS3O75911 302 aa18.02■□□□□ 0.48
CLK3-202ENST00000395066 ZNF806P0C7X5 589 aa18.02■□□□□ 0.48
CLK3-202ENST00000395066 NAT2P11245 290 aa18.02■□□□□ 0.48
CLK3-202ENST00000395066 CBR1P16152 277 aa18.02■□□□□ 0.48
CLK3-202ENST00000395066 GUCA1AP43080 201 aaPredicted RBP18.02■□□□□ 0.48
CLK3-202ENST00000395066 RBMS3Q6XE24 437 aaKnown RBP18.02■□□□□ 0.48
CLK3-202ENST00000395066 FADS6Q8N9I5 356 aa18.02■□□□□ 0.48
CLK3-202ENST00000395066 SHDQ96IW2 340 aa18.02■□□□□ 0.48
CLK3-202ENST00000395066 LIME1Q9H400 295 aa18.02■□□□□ 0.48
CLK3-202ENST00000395066 PLEK2Q9NYT0 353 aa18.02■□□□□ 0.48
CLK3-202ENST00000395066 LY6G6EA0A0G2JKS1 128 aa18.02■□□□□ 0.47
CLK3-202ENST00000395066 FIGNL2A6NMB9 653 aa18.02■□□□□ 0.47
CLK3-202ENST00000395066 LINC00587B1AMM8 73 aa18.02■□□□□ 0.47
CLK3-202ENST00000395066 S100A9P06702 114 aaKnown RBP18.02■□□□□ 0.47
CLK3-202ENST00000395066 S100A6P06703 90 aa18.02■□□□□ 0.47
CLK3-202ENST00000395066 OR8U9P0C7N5 309 aa18.02■□□□□ 0.47
CLK3-202ENST00000395066 CCL3P10147 92 aa18.02■□□□□ 0.47
CLK3-202ENST00000395066 OPRM1P35372 400 aa18.02■□□□□ 0.47
CLK3-202ENST00000395066 PPT1P50897 306 aa18.02■□□□□ 0.47
CLK3-202ENST00000395066 TAS2R46P59540 309 aa18.02■□□□□ 0.47
CLK3-202ENST00000395066 SLC35A1P78382 337 aa18.02■□□□□ 0.47
CLK3-202ENST00000395066 IAH1Q2TAA2 248 aaPredicted RBP18.02■□□□□ 0.47
CLK3-202ENST00000395066 OR8U1Q8NH10 309 aa18.02■□□□□ 0.47
CLK3-202ENST00000395066 NABP1Q96AH0 204 aa18.02■□□□□ 0.47
CLK3-202ENST00000395066 PCED1AQ9H1Q7 454 aa18.02■□□□□ 0.47
CLK3-202ENST00000395066 NELFAQ9H3P2 528 aa18.02■□□□□ 0.47
CLK3-202ENST00000395066 PLEKHJ1Q9NW61 149 aa18.02■□□□□ 0.47
CLK3-202ENST00000395066 HDGFL3Q9Y3E1 203 aa18.02■□□□□ 0.47
CLK3-202ENST00000395066 TIMM10BQ9Y5J6 103 aa18.02■□□□□ 0.47
CLK3-202ENST00000395066 KPTNQ9Y664 436 aa18.02■□□□□ 0.47
CLK3-202ENST00000395066 U3KQA8 63 aa18.02■□□□□ 0.47
CLK3-202ENST00000395066 CD63P08962 238 aa18.01■□□□□ 0.47
CLK3-202ENST00000395066 ZNF44P15621 663 aa18.01■□□□□ 0.47
CLK3-202ENST00000395066 ZNF708P17019 499 aa18.01■□□□□ 0.47
CLK3-202ENST00000395066 TSC22D1Q15714 1073 aa18.01■□□□□ 0.47
CLK3-202ENST00000395066 EIF2S3LQ2VIR3 472 aaKnown RBP18.01■□□□□ 0.47
CLK3-202ENST00000395066 RHBDD1Q8TEB9 315 aa18.01■□□□□ 0.47
CLK3-202ENST00000395066 SECTM1Q8WVN6 248 aa18.01■□□□□ 0.47
CLK3-202ENST00000395066 PIGQQ9BRB3 760 aa18.01■□□□□ 0.47
CLK3-202ENST00000395066 FAAP24Q9BTP7 215 aa18.01■□□□□ 0.47
CLK3-202ENST00000395066 RPS10P5Q9NQ39 176 aa18.01■□□□□ 0.47
CLK3-202ENST00000395066 FAM221AA4D161 298 aa18.01■□□□□ 0.47
CLK3-202ENST00000395066 UBE2CO00762 179 aa18.01■□□□□ 0.47
CLK3-202ENST00000395066 TLX3O43711 291 aaPredicted RBP18.01■□□□□ 0.47
CLK3-202ENST00000395066 SCGB1D2O95969 90 aa18.01■□□□□ 0.47
CLK3-202ENST00000395066 PATE4P0C8F1 98 aa18.01■□□□□ 0.47
CLK3-202ENST00000395066 ACKR3P25106 362 aa18.01■□□□□ 0.47
CLK3-202ENST00000395066 RPL12P30050 165 aaKnown RBP18.01■□□□□ 0.47
CLK3-202ENST00000395066 SP6Q3SY56 376 aa18.01■□□□□ 0.47
CLK3-202ENST00000395066 PPP1R3BQ86XI6 285 aa18.01■□□□□ 0.47
CLK3-202ENST00000395066 GJC3Q8NFK1 279 aa18.01■□□□□ 0.47
CLK3-202ENST00000395066 FBXO17Q96EF6 278 aa18.01■□□□□ 0.47
CLK3-202ENST00000395066 CNTNAP3Q9BZ76 1288 aa18.01■□□□□ 0.47
CLK3-202ENST00000395066 K7EPK0 472 aa18■□□□□ 0.47
CLK3-202ENST00000395066 M0R135 149 aa18■□□□□ 0.47
CLK3-202ENST00000395066 IGLV3-1P01715 115 aa18■□□□□ 0.47
CLK3-202ENST00000395066 FABP1P07148 127 aa18■□□□□ 0.47
CLK3-202ENST00000395066 TMEM225BP0DP42 221 aa18■□□□□ 0.47
CLK3-202ENST00000395066 HGFACQ04756 655 aa18■□□□□ 0.47
CLK3-202ENST00000395066 TAF9Q16594 264 aa18■□□□□ 0.47
CLK3-202ENST00000395066 FAM71E2Q8N5Q1 922 aa18■□□□□ 0.47
CLK3-202ENST00000395066 EMG1Q92979 244 aaKnown RBP18■□□□□ 0.47
CLK3-202ENST00000395066 MRPL24Q96A35 216 aaKnown RBP18■□□□□ 0.47
CLK3-202ENST00000395066 ZNF799Q96GE5 643 aa18■□□□□ 0.47
CLK3-202ENST00000395066 NAA11Q9BSU3 229 aaPredicted RBP18■□□□□ 0.47
CLK3-202ENST00000395066 CHST5Q9GZS9 411 aa18■□□□□ 0.47
CLK3-202ENST00000395066 C14orf166Q9Y224 244 aaKnown RBP18■□□□□ 0.47
CLK3-202ENST00000395066 LSM5Q9Y4Y9 91 aaKnown RBP18■□□□□ 0.47
CLK3-202ENST00000395066 FAM230AA0A1W2PPH8 454 aa18■□□□□ 0.47
CLK3-202ENST00000395066 FAM189A2Q15884 450 aa18■□□□□ 0.47
CLK3-202ENST00000395066 RNF212Q495C1 297 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms