RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 BHLHE23Q8NDY6 225 aa17.08■□□□□ 0.33
PDLIM5-205ENST00000380180 FBXW5Q969U6 566 aa17.08■□□□□ 0.33
PDLIM5-205ENST00000380180 SLC25A21Q9BQT8 299 aaPredicted RBP17.08■□□□□ 0.33
PDLIM5-205ENST00000380180 FGF23Q9GZV9 251 aaPredicted RBP17.08■□□□□ 0.33
PDLIM5-205ENST00000380180 CHST6Q9GZX3 395 aa17.08■□□□□ 0.33
PDLIM5-205ENST00000380180 GPN1Q9HCN4 374 aaPredicted RBP17.08■□□□□ 0.33
PDLIM5-205ENST00000380180 ANAPC10Q9UM13 185 aa17.08■□□□□ 0.33
PDLIM5-205ENST00000380180 TP53TG5Q9Y2B4 290 aa17.08■□□□□ 0.33
PDLIM5-205ENST00000380180 PLEKHA6Q9Y2H5 1048 aa17.08■□□□□ 0.33
PDLIM5-205ENST00000380180 MAP1BP46821 2468 aaKnown RBP17.08■□□□□ 0.32
PDLIM5-205ENST00000380180 CGAP01215 116 aa17.08■□□□□ 0.32
PDLIM5-205ENST00000380180 C1QBP02746 253 aa17.08■□□□□ 0.32
PDLIM5-205ENST00000380180 HOXB1P14653 301 aaPredicted RBP17.08■□□□□ 0.32
PDLIM5-205ENST00000380180 NAT1P18440 290 aa17.08■□□□□ 0.32
PDLIM5-205ENST00000380180 TAF9Q16594 264 aa17.08■□□□□ 0.32
PDLIM5-205ENST00000380180 CEACAM21Q3KPI0 293 aa17.08■□□□□ 0.32
PDLIM5-205ENST00000380180 ZNF626Q68DY1 528 aa17.08■□□□□ 0.32
PDLIM5-205ENST00000380180 ZDHHC23Q8IYP9 409 aa17.08■□□□□ 0.32
PDLIM5-205ENST00000380180 HPSE2Q8WWQ2 592 aa17.08■□□□□ 0.32
PDLIM5-205ENST00000380180 OPN3Q9H1Y3 402 aaPredicted RBP17.08■□□□□ 0.32
PDLIM5-205ENST00000380180 PLEKHJ1Q9NW61 149 aa17.08■□□□□ 0.32
PDLIM5-205ENST00000380180 IL36GQ9NZH8 169 aa17.08■□□□□ 0.32
PDLIM5-205ENST00000380180 ZNF69Q9UC07 566 aa17.08■□□□□ 0.32
PDLIM5-205ENST00000380180 PROCRQ9UNN8 238 aa17.08■□□□□ 0.32
PDLIM5-205ENST00000380180 SERPINE3A8MV23 424 aa17.07■□□□□ 0.32
PDLIM5-205ENST00000380180 SFTPBP07988 381 aa17.07■□□□□ 0.32
PDLIM5-205ENST00000380180 MRPS15P82914 257 aaKnown RBP17.07■□□□□ 0.32
PDLIM5-205ENST00000380180 SIGIRRQ6IA17 410 aa17.07■□□□□ 0.32
PDLIM5-205ENST00000380180 ZNF611Q8N823 705 aa17.07■□□□□ 0.32
PDLIM5-205ENST00000380180 OR52B4Q8NGK2 314 aa17.07■□□□□ 0.32
PDLIM5-205ENST00000380180 OR4K15Q8NH41 348 aa17.07■□□□□ 0.32
PDLIM5-205ENST00000380180 BOD1Q96IK1 185 aa17.07■□□□□ 0.32
PDLIM5-205ENST00000380180 C1QTNF6Q9BXI9 259 aa17.07■□□□□ 0.32
PDLIM5-205ENST00000380180 SLC2A8Q9NY64 477 aa17.07■□□□□ 0.32
PDLIM5-205ENST00000380180 FAM215AQ9Y5M1 114 aa17.07■□□□□ 0.32
PDLIM5-205ENST00000380180 ATMQ13315 3056 aa17.07■□□□□ 0.32
PDLIM5-205ENST00000380180 SNRPGP15A8MWD9 76 aa17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 K7ENP7 123 aa17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 CREBL2O60519 120 aaPredicted RBP17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 PMP2P02689 132 aa17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 GPM6AP51674 278 aa17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 MRPL49Q13405 166 aaKnown RBP17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 ARL6IP1Q15041 203 aa17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 KRTCAP3Q53RY4 240 aa17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 NKAPLQ5M9Q1 402 aa17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 SPATA46Q5T0L3 261 aa17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 SLC25A26Q70HW3 274 aa17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 OSR2Q8N2R0 312 aa17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 WDR31Q8NA23 367 aa17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 C1orf162Q8NEQ5 155 aaPredicted RBP17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 OR13C8Q8NGS7 320 aa17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 EXTL1Q92935 676 aa17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 PRRT1Q99946 306 aa17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 CDH20Q9HBT6 801 aa17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 ZNF581Q9P0T4 197 aa17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 FABP7O15540 132 aa17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 LILRA1O75019 489 aa17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 WDR1O75083 606 aa17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 ANXA3P12429 323 aa17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 TBPP20226 339 aa17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 MPZP25189 248 aa17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 CBX5P45973 191 aa17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 TBR1Q16650 682 aa17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 MICBQ29980 383 aa17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 PIGYQ3MUY2 71 aa17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 FAM180AQ6UWF9 173 aa17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 SEZ6L2Q6UXD5 910 aa17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 CXorf67Q86X51 503 aaPredicted RBP17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 RPRMLQ8N4K4 120 aa17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 ST6GALNAC5Q9BVH7 336 aa17.06■□□□□ 0.32
PDLIM5-205ENST00000380180 MEIKINA0A087WXM9 373 aa17.05■□□□□ 0.32
PDLIM5-205ENST00000380180 TMEM82A0PJX8 343 aa17.05■□□□□ 0.32
PDLIM5-205ENST00000380180 AGFG2O95081 481 aa17.05■□□□□ 0.32
PDLIM5-205ENST00000380180 CBR1P16152 277 aa17.05■□□□□ 0.32
PDLIM5-205ENST00000380180 HOXC12P31275 282 aa17.05■□□□□ 0.32
PDLIM5-205ENST00000380180 GZMKP49863 264 aa17.05■□□□□ 0.32
PDLIM5-205ENST00000380180 OR2T2Q6IF00 324 aa17.05■□□□□ 0.32
PDLIM5-205ENST00000380180 LIX1LQ8IVB5 337 aa17.05■□□□□ 0.32
PDLIM5-205ENST00000380180 FBXL14Q8N1E6 418 aa17.05■□□□□ 0.32
PDLIM5-205ENST00000380180 ZSCAN4Q8NAM6 433 aaPredicted RBP17.05■□□□□ 0.32
PDLIM5-205ENST00000380180 CAPSLQ8WWF8 208 aa17.05■□□□□ 0.32
PDLIM5-205ENST00000380180 MRPS24Q96EL2 167 aaKnown RBP17.05■□□□□ 0.32
PDLIM5-205ENST00000380180 ZNF71Q9NQZ8 489 aaPredicted RBP17.05■□□□□ 0.32
PDLIM5-205ENST00000380180 ZNF230Q9UIE0 474 aaPredicted RBP17.05■□□□□ 0.32
PDLIM5-205ENST00000380180 PTPRQQ9UMZ3 2332 aa17.05■□□□□ 0.32
PDLIM5-205ENST00000380180 ANKRD30BLA7E2S9 258 aa17.04■□□□□ 0.32
PDLIM5-205ENST00000380180 ZNF732B4DXR9 585 aa17.04■□□□□ 0.32
PDLIM5-205ENST00000380180 GEMIN2O14893 280 aaKnown RBP17.04■□□□□ 0.32
PDLIM5-205ENST00000380180 SMPD2O60906 423 aa17.04■□□□□ 0.32
PDLIM5-205ENST00000380180 HAAOP46952 286 aa17.04■□□□□ 0.32
PDLIM5-205ENST00000380180 NPBWR2P48146 333 aa17.04■□□□□ 0.32
PDLIM5-205ENST00000380180 OR5A2Q8NGI9 324 aa17.04■□□□□ 0.32
PDLIM5-205ENST00000380180 CCDC120Q96HB5 630 aa17.04■□□□□ 0.32
PDLIM5-205ENST00000380180 RADILQ96JH8 1075 aa17.04■□□□□ 0.32
PDLIM5-205ENST00000380180 HIST1H2AAQ96QV6 131 aa17.04■□□□□ 0.32
PDLIM5-205ENST00000380180 ALX4Q9H161 411 aaPredicted RBP17.04■□□□□ 0.32
PDLIM5-205ENST00000380180 PCDHB16Q9NRJ7 776 aa17.04■□□□□ 0.32
PDLIM5-205ENST00000380180 ST3GAL6Q9Y274 331 aa17.04■□□□□ 0.32
PDLIM5-205ENST00000380180 PIEZO2Q9H5I5 2752 aa17.04■□□□□ 0.32
PDLIM5-205ENST00000380180 FIGNL2A6NMB9 653 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms