RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 IKZF1Q13422 519 aa5.94□□□□□ -1.46
UBR4-204ENST00000375254 FAM219AQ8IW50 185 aa5.94□□□□□ -1.46
UBR4-204ENST00000375254 EMID1Q96A84 441 aaPredicted RBP5.94□□□□□ -1.46
UBR4-204ENST00000375254 ZNF707Q96C28 371 aaPredicted RBP5.94□□□□□ -1.46
UBR4-204ENST00000375254 ATP6V0BQ99437 205 aa5.94□□□□□ -1.46
UBR4-204ENST00000375254 KIR3DX1Q9H7L2 352 aa5.94□□□□□ -1.46
UBR4-204ENST00000375254 LYRM4Q9HD34 91 aa5.94□□□□□ -1.46
UBR4-204ENST00000375254 SLC2A4RGQ9NR83 387 aa5.94□□□□□ -1.46
UBR4-204ENST00000375254 CES1P1Q9UKY3 287 aa5.94□□□□□ -1.46
UBR4-204ENST00000375254 NEU3Q9UQ49 428 aa5.94□□□□□ -1.46
UBR4-204ENST00000375254 ZFPL1O95159 310 aa5.94□□□□□ -1.46
UBR4-204ENST00000375254 RPL27P61353 136 aaKnown RBP5.94□□□□□ -1.46
UBR4-204ENST00000375254 CFAP161Q6P656 301 aa5.94□□□□□ -1.46
UBR4-204ENST00000375254 FIGLAQ6QHK4 219 aa5.94□□□□□ -1.46
UBR4-204ENST00000375254 OR9G9P0C7N8 305 aa5.94□□□□□ -1.46
UBR4-204ENST00000375254 DEFA4P12838 97 aa5.94□□□□□ -1.46
UBR4-204ENST00000375254 PRRT3Q5FWE3 981 aa5.94□□□□□ -1.46
UBR4-204ENST00000375254 FAM181AQ8N9Y4 354 aa5.94□□□□□ -1.46
UBR4-204ENST00000375254 Q9Y3F1 56 aa5.94□□□□□ -1.46
UBR4-204ENST00000375254 MEGF6O75095 1541 aa5.94□□□□□ -1.46
UBR4-204ENST00000375254 GALR2O43603 387 aaPredicted RBP5.94□□□□□ -1.46
UBR4-204ENST00000375254 GPR183P32249 361 aa5.94□□□□□ -1.46
UBR4-204ENST00000375254 CRISPLD2Q9H0B8 497 aa5.94□□□□□ -1.46
UBR4-204ENST00000375254 SPAG17Q6Q759 2223 aa5.94□□□□□ -1.46
UBR4-204ENST00000375254 MKRN2OSH3BPM6 223 aa5.94□□□□□ -1.46
UBR4-204ENST00000375254 TIAL1Q01085 375 aaKnown RBP eCLIP5.94□□□□□ -1.467e-6■■□□□ 11.9
UBR4-204ENST00000375254 SDHAF4Q5VUM1 108 aa5.94□□□□□ -1.46
UBR4-204ENST00000375254 OR10G3Q8NGC4 313 aa5.94□□□□□ -1.46
UBR4-204ENST00000375254 GYPBP06028 91 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 TMEM164Q5U3C3 297 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 C16orf82Q7Z2V1 217 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 TM4SF18Q96CE8 201 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 OR2W1Q9Y3N9 320 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 CD163L1Q9NR16 1453 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 TRBV24-1A0A075B6N3 115 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 C1SP09871 688 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 CD79AP11912 226 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 NSDHLQ15738 373 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 CDCA3Q99618 268 aaPredicted RBP5.93□□□□□ -1.46
UBR4-204ENST00000375254 LMTK3Q96Q04 1460 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 IGF2P01344 180 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 GAGE5Q13069 117 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 GAGE6Q13070 117 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 SLC25A35Q3KQZ1 300 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 OR10S1Q8NGN2 331 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 GRAMD2BQ96HH9 432 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 SLC17A4Q9Y2C5 497 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 NTNG1Q9Y2I2 539 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 LOC107984156A0A0G2JMH3 177 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 A0A1B0GW64 132 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 CNIH1O95406 144 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 PPP1R17O96001 155 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 SLC37A1P57057 533 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 ZNF774Q6NX45 483 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 ARL17AQ8IVW1 177 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 CHST5Q9GZS9 411 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 PPT2Q9UMR5 302 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 KIF14Q15058 1648 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 PRAMEF26H0Y7S4 382 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 CD8AP01732 235 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 PRDX1Q06830 199 aaKnown RBP5.93□□□□□ -1.46
UBR4-204ENST00000375254 PRAMEF5Q5TYX0 476 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 PRAMEF6Q5VXH4 476 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 GALNT14Q96FL9 552 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 SLC25A37Q9NYZ2 338 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 CXCL14O95715 111 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 ZNF880Q6PDB4 577 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 CHODLQ9H9P2 273 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 A0A0G2JMM0 328 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 A0A1W2PPB8 328 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 KIR3DP1A8MWS1 328 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 M0R3E3 92 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 TCF24Q7RTU0 167 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 TPSD1Q9BZJ3 242 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 AKIRIN1Q9H9L7 192 aaPredicted RBP5.93□□□□□ -1.46
UBR4-204ENST00000375254 MOB4Q9Y3A3 225 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 CCL15-CCL14A0A0B4J2E2 113 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 COX7A2P2O60397 106 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 ICAM2P13598 275 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 OLIG2Q13516 323 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 LINC00116Q8NCU8 138 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 PCOLCE2Q9UKZ9 415 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 S1PR2O95136 353 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 UMODP07911 640 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 RIPPLY3P57055 190 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 RAB32Q13637 225 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 NBPF12Q5TAG4 269 aaPredicted RBP5.93□□□□□ -1.46
UBR4-204ENST00000375254 NHLRC1Q6VVB1 395 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 HRASLS2Q9NWW9 162 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 TAS2R4Q9NYW5 299 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 ZNF217O75362 1048 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 HTR6P50406 440 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 LSM11P83369 360 aaKnown RBP eCLIP5.93□□□□□ -1.465e-7■■□□□ 13.8
UBR4-204ENST00000375254 GPRIN1Q7Z2K8 1008 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 APCDD1LQ8NCL9 501 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 OR1L4Q8NGR5 311 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 OR4S2Q8NH73 311 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 ASB5Q8WWX0 329 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 SMIM8Q96KF7 97 aa5.93□□□□□ -1.46
UBR4-204ENST00000375254 TMEM106BQ9NUM4 274 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 196.9 ms