RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 OR4S1Q8NGB4 309 aa11.14□□□□□ -0.63
CXCL12-202ENST00000374426 SGCDQ92629 289 aa11.14□□□□□ -0.63
CXCL12-202ENST00000374426 PHF21AQ96BD5 680 aa11.14□□□□□ -0.63
CXCL12-202ENST00000374426 R3HDM4Q96D70 268 aa11.14□□□□□ -0.63
CXCL12-202ENST00000374426 AURKAIP1Q9NWT8 199 aaPredicted RBP11.14□□□□□ -0.63
CXCL12-202ENST00000374426 USE1Q9NZ43 259 aa11.14□□□□□ -0.63
CXCL12-202ENST00000374426 TCF19Q9Y242 345 aa11.14□□□□□ -0.63
CXCL12-202ENST00000374426 TMEM269A0A1B0GVZ9 245 aa11.13□□□□□ -0.63
CXCL12-202ENST00000374426 hCG_1809904A0A1W2PP81 198 aa11.13□□□□□ -0.63
CXCL12-202ENST00000374426 A0A1W2PPE2 198 aa11.13□□□□□ -0.63
CXCL12-202ENST00000374426 A0A1W2PR64 198 aa11.13□□□□□ -0.63
CXCL12-202ENST00000374426 A0A1W2PRV1 198 aa11.13□□□□□ -0.63
CXCL12-202ENST00000374426 ACOD1A6NK06 481 aa11.13□□□□□ -0.63
CXCL12-202ENST00000374426 PRR32B1ATL7 298 aa11.13□□□□□ -0.63
CXCL12-202ENST00000374426 PSMD9O00233 223 aa11.13□□□□□ -0.63
CXCL12-202ENST00000374426 SYNGR1O43759 233 aa11.13□□□□□ -0.63
CXCL12-202ENST00000374426 PGA5P0DJD9 388 aa11.13□□□□□ -0.63
CXCL12-202ENST00000374426 ATP6V1B1P15313 513 aa11.13□□□□□ -0.63
CXCL12-202ENST00000374426 SLC2A5P22732 501 aa11.13□□□□□ -0.63
CXCL12-202ENST00000374426 DLX6P56179 175 aa11.13□□□□□ -0.63
CXCL12-202ENST00000374426 MS4A2Q01362 244 aa11.13□□□□□ -0.63
CXCL12-202ENST00000374426 RIPPLY1Q0D2K3 151 aa11.13□□□□□ -0.63
CXCL12-202ENST00000374426 FAM98BQ52LJ0 330 aaKnown RBP11.13□□□□□ -0.63
CXCL12-202ENST00000374426 LDLRAD2Q5SZI1 272 aa11.13□□□□□ -0.63
CXCL12-202ENST00000374426 ZBTB37Q5TC79 503 aa11.13□□□□□ -0.63
CXCL12-202ENST00000374426 PLCXD3Q63HM9 321 aa11.13□□□□□ -0.63
CXCL12-202ENST00000374426 TMEM219Q86XT9 240 aa11.13□□□□□ -0.63
CXCL12-202ENST00000374426 OR2T27Q8NH04 317 aa11.13□□□□□ -0.63
CXCL12-202ENST00000374426 OR51E1Q8TCB6 317 aa11.13□□□□□ -0.63
CXCL12-202ENST00000374426 GIPC3Q8TF64 312 aa11.13□□□□□ -0.63
CXCL12-202ENST00000374426 ITFG2Q969R8 447 aa11.13□□□□□ -0.63
CXCL12-202ENST00000374426 TEAD3Q99594 435 aa11.13□□□□□ -0.63
CXCL12-202ENST00000374426 CITED2Q99967 270 aaPredicted RBP11.13□□□□□ -0.63
CXCL12-202ENST00000374426 CDCA4Q9BXL8 241 aa11.13□□□□□ -0.63
CXCL12-202ENST00000374426 PBOV1Q9GZY1 135 aa11.13□□□□□ -0.63
CXCL12-202ENST00000374426 GPR84Q9NQS5 396 aa11.13□□□□□ -0.63
CXCL12-202ENST00000374426 LAMP5Q9UJQ1 280 aa11.13□□□□□ -0.63
CXCL12-202ENST00000374426 PIGLQ9Y2B2 252 aa11.13□□□□□ -0.63
CXCL12-202ENST00000374426 A6NDX4 124 aa11.12□□□□□ -0.63
CXCL12-202ENST00000374426 ARRDC5A6NEK1 342 aa11.12□□□□□ -0.63
CXCL12-202ENST00000374426 C17orf98A8MV24 154 aa11.12□□□□□ -0.63
CXCL12-202ENST00000374426 J3QT63 122 aa11.12□□□□□ -0.63
CXCL12-202ENST00000374426 NOS1APO75052 506 aaPredicted RBP11.12□□□□□ -0.63
CXCL12-202ENST00000374426 PIPP12273 146 aaPredicted RBP11.12□□□□□ -0.63
CXCL12-202ENST00000374426 HAAOP46952 286 aa11.12□□□□□ -0.63
CXCL12-202ENST00000374426 CNN3Q15417 329 aaKnown RBP11.12□□□□□ -0.63
CXCL12-202ENST00000374426 SLC35D3Q5M8T2 416 aa11.12□□□□□ -0.63
CXCL12-202ENST00000374426 DEGS2Q6QHC5 323 aa11.12□□□□□ -0.63
CXCL12-202ENST00000374426 TMEM179BQ7Z7N9 219 aa11.12□□□□□ -0.63
CXCL12-202ENST00000374426 COMMD2Q86X83 199 aa11.12□□□□□ -0.63
CXCL12-202ENST00000374426 DHFR2Q86XF0 187 aa11.12□□□□□ -0.63
CXCL12-202ENST00000374426 OR4F17Q8NGA8 305 aa11.12□□□□□ -0.63
CXCL12-202ENST00000374426 OR4F4Q96R69 305 aa11.12□□□□□ -0.63
CXCL12-202ENST00000374426 OR8B4Q96RC9 309 aa11.12□□□□□ -0.63
CXCL12-202ENST00000374426 NRIP2Q9BQI9 281 aa11.12□□□□□ -0.63
CXCL12-202ENST00000374426 YIPF3Q9GZM5 350 aa11.12□□□□□ -0.63
CXCL12-202ENST00000374426 WNT10AQ9GZT5 417 aa11.12□□□□□ -0.63
CXCL12-202ENST00000374426 C1orf21Q9H246 121 aa11.12□□□□□ -0.63
CXCL12-202ENST00000374426 MUC13Q9H3R2 512 aa11.12□□□□□ -0.63
CXCL12-202ENST00000374426 DNAH9Q9NYC9 4486 aa11.12□□□□□ -0.63
CXCL12-202ENST00000374426 ODF3BA8MYP8 253 aa11.11□□□□□ -0.63
CXCL12-202ENST00000374426 GSC2O15499 205 aa11.11□□□□□ -0.63
CXCL12-202ENST00000374426 NXPH2O95156 264 aa11.11□□□□□ -0.63
CXCL12-202ENST00000374426 NRASP01111 189 aa11.11□□□□□ -0.63
CXCL12-202ENST00000374426 TK1P04183 234 aa11.11□□□□□ -0.63
CXCL12-202ENST00000374426 HMGN1P05114 100 aa11.11□□□□□ -0.63
CXCL12-202ENST00000374426 RPS7P62081 194 aaKnown RBP11.11□□□□□ -0.63
CXCL12-202ENST00000374426 CDK5Q00535 292 aa11.11□□□□□ -0.63
CXCL12-202ENST00000374426 ROM1Q03395 351 aa11.11□□□□□ -0.63
CXCL12-202ENST00000374426 TRIM25Q14258 630 aaKnown RBP11.11□□□□□ -0.63
CXCL12-202ENST00000374426 GK3PQ14409 553 aa11.11□□□□□ -0.63
CXCL12-202ENST00000374426 SSX2Q16385 188 aa11.11□□□□□ -0.63
CXCL12-202ENST00000374426 ZNF684Q5T5D7 378 aa11.11□□□□□ -0.63
CXCL12-202ENST00000374426 KCTD18Q6PI47 426 aaPredicted RBP11.11□□□□□ -0.63
CXCL12-202ENST00000374426 Q6ZS46 218 aa11.11□□□□□ -0.63
CXCL12-202ENST00000374426 ZNF573Q86YE8 665 aa11.11□□□□□ -0.63
CXCL12-202ENST00000374426 CALHM1Q8IU99 346 aa11.11□□□□□ -0.63
CXCL12-202ENST00000374426 BATF2Q8N1L9 274 aa11.11□□□□□ -0.63
CXCL12-202ENST00000374426 RPS4Y2Q8TD47 263 aa11.11□□□□□ -0.63
CXCL12-202ENST00000374426 FOXRED1Q96CU9 486 aaPredicted RBP11.11□□□□□ -0.63
CXCL12-202ENST00000374426 MALSU1Q96EH3 234 aa11.11□□□□□ -0.63
CXCL12-202ENST00000374426 OR5M11Q96RB7 305 aa11.11□□□□□ -0.63
CXCL12-202ENST00000374426 MROQ9BYG7 248 aa11.11□□□□□ -0.63
CXCL12-202ENST00000374426 HES4Q9HCC6 221 aa11.11□□□□□ -0.63
CXCL12-202ENST00000374426 NUFIP1Q9UHK0 495 aaKnown RBP11.11□□□□□ -0.63
CXCL12-202ENST00000374426 ENPP5Q9UJA9 477 aa11.11□□□□□ -0.63
CXCL12-202ENST00000374426 TBL2Q9Y4P3 447 aaKnown RBP11.11□□□□□ -0.63
CXCL12-202ENST00000374426 PQLC2LA1A4F0 135 aa11.1□□□□□ -0.63
CXCL12-202ENST00000374426 MEX3AA1L020 520 aaKnown RBP11.1□□□□□ -0.63
CXCL12-202ENST00000374426 DHRS3O75911 302 aa11.1□□□□□ -0.63
CXCL12-202ENST00000374426 CST1P01037 141 aa11.1□□□□□ -0.63
CXCL12-202ENST00000374426 ARG1P05089 322 aa11.1□□□□□ -0.63
CXCL12-202ENST00000374426 RAP2AP10114 183 aa11.1□□□□□ -0.63
CXCL12-202ENST00000374426 OSMP13725 252 aa11.1□□□□□ -0.63
CXCL12-202ENST00000374426 BLCAPP62952 87 aa11.1□□□□□ -0.63
CXCL12-202ENST00000374426 MFGE8Q08431 387 aaPredicted RBP11.1□□□□□ -0.63
CXCL12-202ENST00000374426 APOFQ13790 326 aa11.1□□□□□ -0.63
CXCL12-202ENST00000374426 FOXB2Q5VYV0 432 aa11.1□□□□□ -0.63
CXCL12-202ENST00000374426 ZNF626Q68DY1 528 aa11.1□□□□□ -0.63
CXCL12-202ENST00000374426 TMEM42Q69YG0 159 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms