RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 ANXA2P2A6NMY6 339 aa12.77□□□□□ -0.37
DDX55-202ENST00000354291 DYNC1I1O14576 645 aa12.77□□□□□ -0.37
DDX55-202ENST00000354291 NAA10P41227 235 aaPredicted RBP12.77□□□□□ -0.37
DDX55-202ENST00000354291 BLCAPP62952 87 aa12.77□□□□□ -0.37
DDX55-202ENST00000354291 IL5RAQ01344 420 aa12.77□□□□□ -0.37
DDX55-202ENST00000354291 GFOD2Q3B7J2 385 aa12.77□□□□□ -0.37
DDX55-202ENST00000354291 SLC35D3Q5M8T2 416 aa12.77□□□□□ -0.37
DDX55-202ENST00000354291 CENPVQ7Z7K6 275 aaPredicted RBP12.77□□□□□ -0.37
DDX55-202ENST00000354291 SPATA24Q86W54 205 aa12.77□□□□□ -0.37
DDX55-202ENST00000354291 CPOQ8IVL8 374 aa12.77□□□□□ -0.37
DDX55-202ENST00000354291 AMELYQ99218 206 aa12.77□□□□□ -0.37
DDX55-202ENST00000354291 PAPOLGQ9BWT3 736 aaKnown RBP12.77□□□□□ -0.37
DDX55-202ENST00000354291 GPR61Q9BZJ8 451 aa12.77□□□□□ -0.37
DDX55-202ENST00000354291 ABCB9Q9NP78 766 aa12.77□□□□□ -0.37
DDX55-202ENST00000354291 ZNF319Q9P2F9 582 aa12.77□□□□□ -0.37
DDX55-202ENST00000354291 DNAJB9Q9UBS3 223 aa12.77□□□□□ -0.37
DDX55-202ENST00000354291 RHBDD3Q9Y3P4 386 aa12.77□□□□□ -0.37
DDX55-202ENST00000354291 TSSC4Q9Y5U2 329 aaPredicted RBP12.77□□□□□ -0.37
DDX55-202ENST00000354291 MPC1Q9Y5U8 109 aa12.77□□□□□ -0.37
DDX55-202ENST00000354291 LCE6AA0A183 80 aa12.76□□□□□ -0.37
DDX55-202ENST00000354291 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.76□□□□□ -0.37
DDX55-202ENST00000354291 SYNGR1O43759 233 aa12.76□□□□□ -0.37
DDX55-202ENST00000354291 PRKACGP22612 351 aa12.76□□□□□ -0.37
DDX55-202ENST00000354291 CSNK2BP67870 215 aa12.76□□□□□ -0.37
DDX55-202ENST00000354291 CBX1P83916 185 aa12.76□□□□□ -0.37
DDX55-202ENST00000354291 MKXQ8IYA7 352 aa12.76□□□□□ -0.37
DDX55-202ENST00000354291 DNAJC9Q8WXX5 260 aa12.76□□□□□ -0.37
DDX55-202ENST00000354291 C12orf43Q96C57 262 aaKnown RBP12.76□□□□□ -0.37
DDX55-202ENST00000354291 MICU1Q9BPX6 476 aa12.76□□□□□ -0.37
DDX55-202ENST00000354291 ABCB10Q9NRK6 738 aa12.76□□□□□ -0.37
DDX55-202ENST00000354291 TCF19Q9Y242 345 aa12.76□□□□□ -0.37
DDX55-202ENST00000354291 HUWE1Q7Z6Z7 4374 aaKnown RBP12.76□□□□□ -0.37
DDX55-202ENST00000354291 LYSTQ99698 3801 aa12.76□□□□□ -0.37
DDX55-202ENST00000354291 NKX6-3A6NJ46 265 aa12.75□□□□□ -0.37
DDX55-202ENST00000354291 SELENOFO60613 162 aa12.75□□□□□ -0.37
DDX55-202ENST00000354291 FKBP6O75344 327 aa12.75□□□□□ -0.37
DDX55-202ENST00000354291 RPS7P62081 194 aaKnown RBP12.75□□□□□ -0.37
DDX55-202ENST00000354291 DGUOKQ16854 277 aa12.75□□□□□ -0.37
DDX55-202ENST00000354291 TCTEX1D4Q5JR98 221 aa12.75□□□□□ -0.37
DDX55-202ENST00000354291 KHDC1LQ5JSQ8 128 aa12.75□□□□□ -0.37
DDX55-202ENST00000354291 NKAPLQ5M9Q1 402 aa12.75□□□□□ -0.37
DDX55-202ENST00000354291 ATPAF1Q5TC12 328 aaPredicted RBP12.75□□□□□ -0.37
DDX55-202ENST00000354291 STUMQ69YW2 141 aa12.75□□□□□ -0.37
DDX55-202ENST00000354291 WDR82Q6UXN9 313 aa12.75□□□□□ -0.37
DDX55-202ENST00000354291 UNQ9370/PRO34162Q6UXP9 181 aa12.75□□□□□ -0.37
DDX55-202ENST00000354291 WDR86Q86TI4 376 aa12.75□□□□□ -0.37
DDX55-202ENST00000354291 HS3ST5Q8IZT8 346 aa12.75□□□□□ -0.37
DDX55-202ENST00000354291 FAM185AQ8N0U4 392 aa12.75□□□□□ -0.37
DDX55-202ENST00000354291 BCAS4Q8TDM0 211 aa12.75□□□□□ -0.37
DDX55-202ENST00000354291 ITFG2Q969R8 447 aa12.75□□□□□ -0.37
DDX55-202ENST00000354291 NRBF2Q96F24 287 aa12.75□□□□□ -0.37
DDX55-202ENST00000354291 MED30Q96HR3 178 aa12.75□□□□□ -0.37
DDX55-202ENST00000354291 RTL8AQ9BWD3 113 aa12.75□□□□□ -0.37
DDX55-202ENST00000354291 TLNRD1Q9H1K6 362 aa12.75□□□□□ -0.37
DDX55-202ENST00000354291 ELL3Q9HB65 397 aaPredicted RBP12.75□□□□□ -0.37
DDX55-202ENST00000354291 HAO2Q9NYQ3 351 aa12.75□□□□□ -0.37
DDX55-202ENST00000354291 LAMP5Q9UJQ1 280 aa12.75□□□□□ -0.37
DDX55-202ENST00000354291 TCRBV3S1A0A5B6 114 aa12.74□□□□□ -0.37
DDX55-202ENST00000354291 A6NDX4 124 aa12.74□□□□□ -0.37
DDX55-202ENST00000354291 F2RL2O00254 374 aa12.74□□□□□ -0.37
DDX55-202ENST00000354291 CDIPTO14735 213 aa12.74□□□□□ -0.37
DDX55-202ENST00000354291 DNAJC8O75937 253 aaPredicted RBP12.74□□□□□ -0.37
DDX55-202ENST00000354291 ZFPL1O95159 310 aa12.74□□□□□ -0.37
DDX55-202ENST00000354291 CST4P01036 141 aa12.74□□□□□ -0.37
DDX55-202ENST00000354291 ALDOBP05062 364 aa12.74□□□□□ -0.37
DDX55-202ENST00000354291 ALOX5APP20292 161 aa12.74□□□□□ -0.37
DDX55-202ENST00000354291 COX7A1P24310 79 aa12.74□□□□□ -0.37
DDX55-202ENST00000354291 SNAPC1Q16533 368 aa12.74□□□□□ -0.37
DDX55-202ENST00000354291 KCTD18Q6PI47 426 aaPredicted RBP12.74□□□□□ -0.37
DDX55-202ENST00000354291 KRT77Q7Z794 578 aa12.74□□□□□ -0.37
DDX55-202ENST00000354291 LHFPL4Q7Z7J7 247 aa12.74□□□□□ -0.37
DDX55-202ENST00000354291 TFAP2CQ92754 450 aa12.74□□□□□ -0.37
DDX55-202ENST00000354291 MYDGFQ969H8 173 aa12.74□□□□□ -0.37
DDX55-202ENST00000354291 YIPF3Q9GZM5 350 aa12.74□□□□□ -0.37
DDX55-202ENST00000354291 WDR13Q9H1Z4 485 aa12.74□□□□□ -0.37
DDX55-202ENST00000354291 HEXA-AS1Q9H8Q6 139 aa12.74□□□□□ -0.37
DDX55-202ENST00000354291 SLC25A19Q9HC21 320 aa12.74□□□□□ -0.37
DDX55-202ENST00000354291 POMPQ9Y244 141 aa12.74□□□□□ -0.37
DDX55-202ENST00000354291 ACOD1A6NK06 481 aa12.73□□□□□ -0.37
DDX55-202ENST00000354291 TMEM210A6NLX4 147 aa12.73□□□□□ -0.37
DDX55-202ENST00000354291 ZNF850A8MQ14 1090 aa12.73□□□□□ -0.37
DDX55-202ENST00000354291 LYL1P12980 280 aa12.73□□□□□ -0.37
DDX55-202ENST00000354291 SLC2A5P22732 501 aa12.73□□□□□ -0.37
DDX55-202ENST00000354291 CRISP1P54107 249 aa12.73□□□□□ -0.37
DDX55-202ENST00000354291 PSMA6P60900 246 aaKnown RBP12.73□□□□□ -0.37
DDX55-202ENST00000354291 PRDX4Q13162 271 aa12.73□□□□□ -0.37
DDX55-202ENST00000354291 APOFQ13790 326 aa12.73□□□□□ -0.37
DDX55-202ENST00000354291 FAM76BQ5HYJ3 339 aa12.73□□□□□ -0.37
DDX55-202ENST00000354291 TMEM236Q5W0B7 351 aa12.73□□□□□ -0.37
DDX55-202ENST00000354291 DEGS2Q6QHC5 323 aa12.73□□□□□ -0.37
DDX55-202ENST00000354291 ZNF788Q6ZQV5 615 aa12.73□□□□□ -0.37
DDX55-202ENST00000354291 MEPCEQ7L2J0 689 aaKnown RBP12.73□□□□□ -0.37
DDX55-202ENST00000354291 DYNAPQ8N1N2 210 aa12.73□□□□□ -0.37
DDX55-202ENST00000354291 LINC00482Q8N8I6 264 aa12.73□□□□□ -0.37
DDX55-202ENST00000354291 BBS1Q8NFJ9 593 aa12.73□□□□□ -0.37
DDX55-202ENST00000354291 OR10Z1Q8NGY1 313 aa12.73□□□□□ -0.37
DDX55-202ENST00000354291 RPS4Y2Q8TD47 263 aa12.73□□□□□ -0.37
DDX55-202ENST00000354291 OR5P3Q8WZ94 311 aa12.73□□□□□ -0.37
DDX55-202ENST00000354291 PIGCQ92535 297 aa12.73□□□□□ -0.37
DDX55-202ENST00000354291 SLC7A6OSQ96CW6 309 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms