RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 TMEM268Q5VZI3 342 aa14.08□□□□□ -0.15
PRPF40B-201ENST00000261897 Q7L0L9 218 aa14.08□□□□□ -0.15
PRPF40B-201ENST00000261897 OR11L1Q8NGX0 322 aa14.08□□□□□ -0.15
PRPF40B-201ENST00000261897 FAAP24Q9BTP7 215 aa14.08□□□□□ -0.15
PRPF40B-201ENST00000261897 HS3ST3B1Q9Y662 390 aa14.08□□□□□ -0.15
PRPF40B-201ENST00000261897 IL2RAP01589 272 aa14.08□□□□□ -0.16
PRPF40B-201ENST00000261897 HOXB2P14652 356 aa14.08□□□□□ -0.16
PRPF40B-201ENST00000261897 RAB1AP62820 205 aa14.08□□□□□ -0.16
PRPF40B-201ENST00000261897 PMS2P11Q13670 270 aa14.08□□□□□ -0.16
PRPF40B-201ENST00000261897 ZNF695Q8IW36 515 aa14.08□□□□□ -0.16
PRPF40B-201ENST00000261897 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.08□□□□□ -0.16
PRPF40B-201ENST00000261897 EMG1Q92979 244 aaKnown RBP14.08□□□□□ -0.16
PRPF40B-201ENST00000261897 RNF166Q96A37 237 aaPredicted RBP14.08□□□□□ -0.16
PRPF40B-201ENST00000261897 CHST5Q9GZS9 411 aa14.08□□□□□ -0.16
PRPF40B-201ENST00000261897 NSG1A0A0A6YYJ2 146 aa14.08□□□□□ -0.16
PRPF40B-201ENST00000261897 E5RGE8 158 aa14.08□□□□□ -0.16
PRPF40B-201ENST00000261897 ERVFRD-1P60508 538 aa14.08□□□□□ -0.16
PRPF40B-201ENST00000261897 THNSL2Q86YJ6 484 aa14.08□□□□□ -0.16
PRPF40B-201ENST00000261897 LGI3Q8N145 548 aa14.08□□□□□ -0.16
PRPF40B-201ENST00000261897 OR14L1PQ8NHC6 308 aa14.08□□□□□ -0.16
PRPF40B-201ENST00000261897 SLC37A2Q8TED4 501 aa14.08□□□□□ -0.16
PRPF40B-201ENST00000261897 C11orf40Q8WZ69 217 aa14.08□□□□□ -0.16
PRPF40B-201ENST00000261897 OR14J1Q9UGF5 321 aa14.08□□□□□ -0.16
PRPF40B-201ENST00000261897 NSG2Q9Y328 171 aa14.08□□□□□ -0.16
PRPF40B-201ENST00000261897 H3BMH7 237 aa14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 SPRY1O43609 319 aaPredicted RBP14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 CDC14BO60729 498 aa14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 ZNF217O75362 1048 aa14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 MBPP02686 304 aaPredicted RBP14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 HIST1H1BP16401 226 aaKnown RBP14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 SCAND1P57086 179 aa14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 TAS2R60P59551 318 aa14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 GKN2Q86XP6 184 aa14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 TMEM156Q8N614 296 aa14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 DTWD2Q8NBA8 298 aa14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 LPAR5Q9H1C0 372 aa14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 COPS7AQ9UBW8 275 aa14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 A0A0J9YY10 115 aa14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 CHRM2P08172 466 aa14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 PAX6P26367 422 aa14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 RPS16P62249 146 aaKnown RBP14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 SUPT4H1P63272 117 aaKnown RBP14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 MYPOPQ86VE0 399 aaPredicted RBP14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 ZNF524Q96C55 264 aa14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 TVP23CQ96ET8 276 aa14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 KLRF1Q9NZS2 232 aa14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 CHD3Q12873 2000 aaKnown RBP14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 RBMXL2O75526 392 aaKnown RBP14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 HPNP05981 417 aa14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 ZNF121P58317 390 aaPredicted RBP14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 RND3P61587 244 aa14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 PRR18Q8N4B5 295 aa14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 POC1AQ8NBT0 407 aa14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 OR52M1Q8NGK5 317 aa14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 OR5C1Q8NGR4 320 aa14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 HOXB13Q92826 284 aaPredicted RBP14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 NTNG2Q96CW9 530 aa14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 TXNIPQ9H3M7 391 aa14.07□□□□□ -0.16
PRPF40B-201ENST00000261897 DOCK7Q96N67 2140 aa14.06□□□□□ -0.16
PRPF40B-201ENST00000261897 HEATR1Q9H583 2144 aaKnown RBP14.06□□□□□ -0.16
PRPF40B-201ENST00000261897 A0A1W2PNR3 127 aa14.06□□□□□ -0.16
PRPF40B-201ENST00000261897 TGFBR3LH3BV60 316 aa14.06□□□□□ -0.16
PRPF40B-201ENST00000261897 ZNHIT1O43257 154 aa14.06□□□□□ -0.16
PRPF40B-201ENST00000261897 BPNT1O95861 308 aa14.06□□□□□ -0.16
PRPF40B-201ENST00000261897 IGHV2-5P01817 119 aa14.06□□□□□ -0.16
PRPF40B-201ENST00000261897 PGA3P0DJD8 388 aa14.06□□□□□ -0.16
PRPF40B-201ENST00000261897 LHX8Q68G74 356 aa14.06□□□□□ -0.16
PRPF40B-201ENST00000261897 OR5B12Q96R08 314 aa14.06□□□□□ -0.16
PRPF40B-201ENST00000261897 RTN4RQ9BZR6 473 aa14.06□□□□□ -0.16
PRPF40B-201ENST00000261897 TUBA4BQ9H853 241 aa14.06□□□□□ -0.16
PRPF40B-201ENST00000261897 MSL2Q9HCI7 577 aa14.06□□□□□ -0.16
PRPF40B-201ENST00000261897 PLA2G2EQ9NZK7 142 aa14.06□□□□□ -0.16
PRPF40B-201ENST00000261897 ANAPC1Q9H1A4 1944 aa14.06□□□□□ -0.16
PRPF40B-201ENST00000261897 IGKV1D-43A0A0B4J1Z2 117 aa14.06□□□□□ -0.16
PRPF40B-201ENST00000261897 ASAH2BP0C7U1 165 aa14.06□□□□□ -0.16
PRPF40B-201ENST00000261897 MTCP1P56278 107 aa14.06□□□□□ -0.16
PRPF40B-201ENST00000261897 RNF4P78317 190 aa14.06□□□□□ -0.16
PRPF40B-201ENST00000261897 CPNE4Q96A23 557 aaPredicted RBP14.06□□□□□ -0.16
PRPF40B-201ENST00000261897 RTBDNQ9BSG5 229 aaPredicted RBP14.06□□□□□ -0.16
PRPF40B-201ENST00000261897 ZNF160Q9HCG1 818 aa14.06□□□□□ -0.16
PRPF40B-201ENST00000261897 SIRT7Q9NRC8 400 aa14.06□□□□□ -0.16
PRPF40B-201ENST00000261897 XKRY2A2RUG3 117 aa14.05□□□□□ -0.16
PRPF40B-201ENST00000261897 WIPF3A6NGB9 483 aa14.05□□□□□ -0.16
PRPF40B-201ENST00000261897 FGF7P21781 194 aa14.05□□□□□ -0.16
PRPF40B-201ENST00000261897 CCNOP22674 350 aa14.05□□□□□ -0.16
PRPF40B-201ENST00000261897 ATP6V0CP27449 155 aa14.05□□□□□ -0.16
PRPF40B-201ENST00000261897 MMP16P51512 607 aa14.05□□□□□ -0.16
PRPF40B-201ENST00000261897 FAHD2BQ6P2I3 314 aaPredicted RBP14.05□□□□□ -0.16
PRPF40B-201ENST00000261897 SLC43A2Q8N370 569 aa14.05□□□□□ -0.16
PRPF40B-201ENST00000261897 MRPL43Q8N983 215 aaKnown RBP14.05□□□□□ -0.16
PRPF40B-201ENST00000261897 FAHD2AQ96GK7 314 aa14.05□□□□□ -0.16
PRPF40B-201ENST00000261897 HDAC8Q9BY41 377 aa14.05□□□□□ -0.16
PRPF40B-201ENST00000261897 A6NNC1 897 aa14.05□□□□□ -0.16
PRPF40B-201ENST00000261897 TTRP02766 147 aa14.05□□□□□ -0.16
PRPF40B-201ENST00000261897 FOLR2P14207 255 aa14.05□□□□□ -0.16
PRPF40B-201ENST00000261897 IL2RGP31785 369 aa14.05□□□□□ -0.16
PRPF40B-201ENST00000261897 RUNX3Q13761 415 aa14.05□□□□□ -0.16
PRPF40B-201ENST00000261897 CEBPEQ15744 281 aa14.05□□□□□ -0.16
PRPF40B-201ENST00000261897 NCR3LG1Q68D85 454 aa14.05□□□□□ -0.16
PRPF40B-201ENST00000261897 LILRA6Q6PI73 481 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms