RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 LY86O95711 162 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 ARG1P05089 322 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 NFYBP25208 207 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 TLE4Q04727 773 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 MICBQ29980 383 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 OSR2Q8N2R0 312 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 CCDC74BQ96LY2 380 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 PLEKHA2Q9HB19 425 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 FRMPD3Q5JV73 1810 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 TCN2P20062 427 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 RGS7BPQ6MZT1 257 aaPredicted RBP4.09□□□□□ -1.75
VPS13C-201ENST00000249837 Q7L0L9 218 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 WDR5BQ86VZ2 330 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 SLC39A9Q9NUM3 307 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 KCNK7Q9Y2U2 307 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 IGHV1OR21-1A0A087WYE8 117 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 PRR32B1ATL7 298 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 RAB27BO00194 218 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 CPN1P15169 458 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 KIR2DL1P43626 348 aaPredicted RBP4.09□□□□□ -1.75
VPS13C-201ENST00000249837 MEOX2P50222 304 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 PTCRAQ6ISU1 281 aaPredicted RBP4.09□□□□□ -1.75
VPS13C-201ENST00000249837 PTPMT1Q8WUK0 201 aaPredicted RBP4.09□□□□□ -1.75
VPS13C-201ENST00000249837 EXTL1Q92935 676 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 NAT6Q93015 286 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 MALSU1Q96EH3 234 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 ADAT3Q96EY9 351 aaPredicted RBP4.09□□□□□ -1.75
VPS13C-201ENST00000249837 IFT22Q9H7X7 185 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 C5orf49A4QMS7 147 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 MFSD2BA6NFX1 497 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 IL2RGP31785 369 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 NKX2-1P43699 371 aaPredicted RBP4.09□□□□□ -1.75
VPS13C-201ENST00000249837 MECP2P51608 486 aaKnown RBP4.09□□□□□ -1.75
VPS13C-201ENST00000249837 DVL1P1P54792 670 aaPredicted RBP4.09□□□□□ -1.75
VPS13C-201ENST00000249837 ARG2P78540 354 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 DEFA6Q01524 100 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 ZNF561Q8N587 486 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 SPACA9Q96E40 222 aaPredicted RBP4.09□□□□□ -1.75
VPS13C-201ENST00000249837 HIST1H1DP16402 221 aaKnown RBP4.09□□□□□ -1.75
VPS13C-201ENST00000249837 MSMO1Q15800 293 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 ARHGEF39Q8N4T4 335 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 MRPL24Q96A35 216 aaKnown RBP4.09□□□□□ -1.75
VPS13C-201ENST00000249837 FAM234AQ9H0X4 552 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 RASL12Q9NYN1 266 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 SLCO1B1Q9Y6L6 691 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.09□□□□□ -1.75
VPS13C-201ENST00000249837 SCAF4O95104 1147 aaKnown RBP4.09□□□□□ -1.75
VPS13C-201ENST00000249837 HPP00738 406 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 CST4P01036 141 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 GRPP07492 148 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 VSIG8P0DPA2 414 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 HNF1AP20823 631 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 THBS4P35443 961 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 ID4P47928 161 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 F2RL1P55085 397 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 RABEPKQ7Z6M1 372 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 MRPL41Q8IXM3 137 aaKnown RBP4.09□□□□□ -1.75
VPS13C-201ENST00000249837 SLC22A18ASQ8N1D0 253 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 OR56B2PQ8NGI1 322 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 RAB18Q9NP72 206 aa4.09□□□□□ -1.75
VPS13C-201ENST00000249837 BOKQ9UMX3 212 aaPredicted RBP4.09□□□□□ -1.75
VPS13C-201ENST00000249837 TANC2Q9HCD6 1990 aa4.09□□□□□ -1.76
VPS13C-201ENST00000249837 SCGB1D1O95968 90 aa4.09□□□□□ -1.76
VPS13C-201ENST00000249837 TMEM33P57088 247 aa4.09□□□□□ -1.76
VPS13C-201ENST00000249837 RPL19P84098 196 aaKnown RBP4.09□□□□□ -1.76
VPS13C-201ENST00000249837 ANKRD37Q7Z713 158 aa4.09□□□□□ -1.76
VPS13C-201ENST00000249837 VASH2Q86V25 355 aa4.09□□□□□ -1.76
VPS13C-201ENST00000249837 RHBDD1Q8TEB9 315 aa4.09□□□□□ -1.76
VPS13C-201ENST00000249837 LHX4Q969G2 390 aa4.09□□□□□ -1.76
VPS13C-201ENST00000249837 SLC26A1Q9H2B4 701 aa4.09□□□□□ -1.76
VPS13C-201ENST00000249837 C12orf10Q9HB07 376 aa4.09□□□□□ -1.76
VPS13C-201ENST00000249837 MRPS18BQ9Y676 258 aaKnown RBP4.09□□□□□ -1.76
VPS13C-201ENST00000249837 LIPT2A6NK58 231 aa4.09□□□□□ -1.76
VPS13C-201ENST00000249837 H7BYZ3 331 aa4.09□□□□□ -1.76
VPS13C-201ENST00000249837 DUS4LO95620 317 aaKnown RBP4.09□□□□□ -1.76
VPS13C-201ENST00000249837 PNLIPP16233 465 aa4.09□□□□□ -1.76
VPS13C-201ENST00000249837 PTGFRP43088 359 aa4.09□□□□□ -1.76
VPS13C-201ENST00000249837 GPR3P46089 330 aa4.09□□□□□ -1.76
VPS13C-201ENST00000249837 SRPXP78539 464 aa4.09□□□□□ -1.76
VPS13C-201ENST00000249837 LDLRAD3Q86YD5 345 aa4.09□□□□□ -1.76
VPS13C-201ENST00000249837 ARRDC1Q8N5I2 433 aa4.09□□□□□ -1.76
VPS13C-201ENST00000249837 UTP23Q9BRU9 249 aaKnown RBP4.09□□□□□ -1.76
VPS13C-201ENST00000249837 CABLES2Q9BTV7 478 aa4.09□□□□□ -1.76
VPS13C-201ENST00000249837 MCTS1Q9ULC4 181 aaKnown RBP4.09□□□□□ -1.76
VPS13C-201ENST00000249837 TIMM10BQ9Y5J6 103 aa4.09□□□□□ -1.76
VPS13C-201ENST00000249837 ABCD4O14678 606 aa4.09□□□□□ -1.76
VPS13C-201ENST00000249837 PPP1R2P9O14990 202 aa4.09□□□□□ -1.76
VPS13C-201ENST00000249837 FPR2P25090 351 aa4.09□□□□□ -1.76
VPS13C-201ENST00000249837 FUT7Q11130 342 aa4.09□□□□□ -1.76
VPS13C-201ENST00000249837 FZD5Q13467 585 aa4.09□□□□□ -1.76
VPS13C-201ENST00000249837 DEGS2Q6QHC5 323 aa4.09□□□□□ -1.76
VPS13C-201ENST00000249837 IL34Q6ZMJ4 242 aa4.09□□□□□ -1.76
VPS13C-201ENST00000249837 SLC36A1Q7Z2H8 476 aa4.09□□□□□ -1.76
VPS13C-201ENST00000249837 MITD1Q8WV92 249 aa4.09□□□□□ -1.76
VPS13C-201ENST00000249837 MCHR2Q969V1 340 aa4.09□□□□□ -1.76
VPS13C-201ENST00000249837 CSPG4Q6UVK1 2322 aa4.09□□□□□ -1.76
VPS13C-201ENST00000249837 TRBV5-5A0A0J9YX44 114 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 TGFBR3LH3BV60 316 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 SHBQ15464 509 aa4.08□□□□□ -1.76
VPS13C-201ENST00000249837 SPANXN5Q5MJ07 72 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms