RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 PRICKLE4Q2TBC4 344 aa10.31□□□□□ -0.76
LAMA4-201ENST00000230538 ZNF774Q6NX45 483 aa10.31□□□□□ -0.76
LAMA4-201ENST00000230538 ACSM6Q6P461 480 aa10.31□□□□□ -0.76
LAMA4-201ENST00000230538 UQCC3Q6UW78 93 aa10.31□□□□□ -0.76
LAMA4-201ENST00000230538 MYPOPQ86VE0 399 aaPredicted RBP10.31□□□□□ -0.76
LAMA4-201ENST00000230538 TSPAN32Q96QS1 320 aa10.31□□□□□ -0.76
LAMA4-201ENST00000230538 P4HTMQ9NXG6 502 aa10.31□□□□□ -0.76
LAMA4-201ENST00000230538 TMED3Q9Y3Q3 217 aa10.31□□□□□ -0.76
LAMA4-201ENST00000230538 HSBP1O75506 76 aa10.31□□□□□ -0.76
LAMA4-201ENST00000230538 FGF2P09038 288 aa10.31□□□□□ -0.76
LAMA4-201ENST00000230538 GUK1Q16774 197 aa10.31□□□□□ -0.76
LAMA4-201ENST00000230538 FAAP24Q9BTP7 215 aa10.31□□□□□ -0.76
LAMA4-201ENST00000230538 PSG11Q9UQ72 335 aa10.31□□□□□ -0.76
LAMA4-201ENST00000230538 KCNE1BA0A087WTH5 132 aa10.31□□□□□ -0.76
LAMA4-201ENST00000230538 SLC37A1P57057 533 aa10.31□□□□□ -0.76
LAMA4-201ENST00000230538 RNF212Q495C1 297 aa10.31□□□□□ -0.76
LAMA4-201ENST00000230538 PCED1AQ9H1Q7 454 aa10.31□□□□□ -0.76
LAMA4-201ENST00000230538 MMP26Q9NRE1 261 aa10.31□□□□□ -0.76
LAMA4-201ENST00000230538 C3orf85A0A1B0GTC6 90 aa10.31□□□□□ -0.76
LAMA4-201ENST00000230538 PPIHO43447 177 aaKnown RBP10.31□□□□□ -0.76
LAMA4-201ENST00000230538 KIR2DS2P43631 304 aa10.31□□□□□ -0.76
LAMA4-201ENST00000230538 WNT3P56703 355 aa10.31□□□□□ -0.76
LAMA4-201ENST00000230538 SLC38A11Q08AI6 406 aa10.31□□□□□ -0.76
LAMA4-201ENST00000230538 TRAT1Q6PIZ9 186 aa10.31□□□□□ -0.76
LAMA4-201ENST00000230538 NTNG2Q96CW9 530 aa10.31□□□□□ -0.76
LAMA4-201ENST00000230538 EXOGQ9Y2C4 368 aaKnown RBP10.31□□□□□ -0.76
LAMA4-201ENST00000230538 IGHV5-51A0A0C4DH38 117 aa10.3□□□□□ -0.76
LAMA4-201ENST00000230538 TOX3O15405 576 aaPredicted RBP10.3□□□□□ -0.76
LAMA4-201ENST00000230538 SFT2D2O95562 160 aa10.3□□□□□ -0.76
LAMA4-201ENST00000230538 CST4P01036 141 aa10.3□□□□□ -0.76
LAMA4-201ENST00000230538 PGA3P0DJD8 388 aa10.3□□□□□ -0.76
LAMA4-201ENST00000230538 GALR1P47211 349 aa10.3□□□□□ -0.76
LAMA4-201ENST00000230538 FZD5Q13467 585 aa10.3□□□□□ -0.76
LAMA4-201ENST00000230538 ST3GAL2Q16842 350 aa10.3□□□□□ -0.76
LAMA4-201ENST00000230538 GTF2H5Q6ZYL4 71 aa10.3□□□□□ -0.76
LAMA4-201ENST00000230538 GPR137Q96N19 417 aa10.3□□□□□ -0.76
LAMA4-201ENST00000230538 C12orf57Q99622 126 aa10.3□□□□□ -0.76
LAMA4-201ENST00000230538 MYO9BQ13459 2157 aa10.3□□□□□ -0.76
LAMA4-201ENST00000230538 PLPP2O43688 288 aa10.3□□□□□ -0.76
LAMA4-201ENST00000230538 USF1P22415 310 aaPredicted RBP10.3□□□□□ -0.76
LAMA4-201ENST00000230538 OR3A4PP47883 348 aa10.3□□□□□ -0.76
LAMA4-201ENST00000230538 RAB7AP51149 207 aa10.3□□□□□ -0.76
LAMA4-201ENST00000230538 HYAL1Q12794 435 aa10.3□□□□□ -0.76
LAMA4-201ENST00000230538 HFEQ30201 348 aa10.3□□□□□ -0.76
LAMA4-201ENST00000230538 ZBTB37Q5TC79 503 aa10.3□□□□□ -0.76
LAMA4-201ENST00000230538 Q3ZCU0 254 aa10.3□□□□□ -0.76
LAMA4-201ENST00000230538 VAMP8Q9BV40 100 aa10.3□□□□□ -0.76
LAMA4-201ENST00000230538 PLA2G2FQ9BZM2 168 aa10.3□□□□□ -0.76
LAMA4-201ENST00000230538 SLIRPQ9GZT3 109 aaKnown RBP10.3□□□□□ -0.76
LAMA4-201ENST00000230538 PARD6AQ9NPB6 346 aa10.3□□□□□ -0.76
LAMA4-201ENST00000230538 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.3□□□□□ -0.76
LAMA4-201ENST00000230538 CDC14BO60729 498 aa10.3□□□□□ -0.76
LAMA4-201ENST00000230538 ZXDAP98168 799 aa10.3□□□□□ -0.76
LAMA4-201ENST00000230538 DOCK1Q14185 1865 aa10.3□□□□□ -0.76
LAMA4-201ENST00000230538 LHX8Q68G74 356 aa10.3□□□□□ -0.76
LAMA4-201ENST00000230538 OR13G1Q8NGZ3 307 aa10.3□□□□□ -0.76
LAMA4-201ENST00000230538 NEIL1Q96FI4 390 aaPredicted RBP10.3□□□□□ -0.76
LAMA4-201ENST00000230538 FAM90A27PA6NNH2 459 aa10.3□□□□□ -0.76
LAMA4-201ENST00000230538 GYPAP02724 150 aa10.3□□□□□ -0.76
LAMA4-201ENST00000230538 SCGB1C2P0DMR2 95 aa10.3□□□□□ -0.76
LAMA4-201ENST00000230538 PABPC1L2AQ5JQF8 200 aa10.3□□□□□ -0.76
LAMA4-201ENST00000230538 RNASEKQ6P5S7 137 aaKnown RBP10.3□□□□□ -0.76
LAMA4-201ENST00000230538 PPIL1Q9Y3C6 166 aa10.3□□□□□ -0.76
LAMA4-201ENST00000230538 ZNF32P17041 273 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 RAB40CQ96S21 281 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 FKBP11Q9NYL4 201 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 SERGEFQ9UGK8 458 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 MT-CO3P00414 261 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 NQO2P16083 231 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 ZP3P21754 424 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 CD96P40200 585 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 HNRNPA3P51991 378 aaKnown RBP10.29□□□□□ -0.76
LAMA4-201ENST00000230538 SSPNQ14714 243 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 TMEM215Q68D42 235 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 C6orf201Q7Z4U5 140 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 CLRN3Q8NCR9 226 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 OR2D2Q9H210 308 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 BMP5P22003 454 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 EIF3IQ13347 325 aaKnown RBP10.29□□□□□ -0.76
LAMA4-201ENST00000230538 OR1L4Q8NGR5 311 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 OR10D3Q8NH80 312 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 BLNKQ8WV28 456 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 OR2A5Q96R48 311 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 RASL12Q9NYN1 266 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 TRAPPC4Q9Y296 219 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 C9orf170A2RU37 121 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 MBTPS2O43462 519 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 CTSVO60911 334 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 YBX1P67809 324 aaKnown RBP10.29□□□□□ -0.76
LAMA4-201ENST00000230538 SPINK9Q5DT21 86 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 DHRS13Q6UX07 377 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 CCL17Q92583 94 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 GAL3ST2Q9H3Q3 398 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 CLEC5AQ9NY25 188 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 GNG4P50150 75 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 TNFAIP6P98066 277 aaPredicted RBP10.29□□□□□ -0.76
LAMA4-201ENST00000230538 PPP1R1AQ13522 171 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 PRSS41Q7RTY9 318 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 LRRC29Q8WV35 223 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 C4orf45Q96LM5 186 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms