RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 C8orf44Q96CB5 159 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 SLCO1B1Q9Y6L6 691 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 OBSL1O75147 1896 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 C5orf63A6NC05 138 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 IGFBP3P17936 291 aaPredicted RBP12.15□□□□□ -0.46
SCARB2-227ENST00000640957 GABRR1P24046 479 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 FCARP24071 287 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 ARL4DP49703 201 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 DLK1P80370 383 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 SSBP1Q04837 148 aaKnown RBP12.15□□□□□ -0.46
SCARB2-227ENST00000640957 PNLIPRP3Q17RR3 467 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 C1orf53Q5VUE5 145 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 AADACL3Q5VUY0 350 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 LYZL2Q7Z4W2 148 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 CYB561D1Q8N8Q1 229 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 OR51T1Q8NGJ9 327 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 OR52N5Q8NH56 324 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 PHOSPHO2Q8TCD6 241 aa12.15□□□□□ -0.46
SCARB2-227ENST00000640957 LIN37Q96GY3 246 aaPredicted RBP12.15□□□□□ -0.46
SCARB2-227ENST00000640957 MYOZ1Q9NP98 299 aaPredicted RBP12.15□□□□□ -0.46
SCARB2-227ENST00000640957 MRPS28Q9Y2Q9 187 aaKnown RBP12.15□□□□□ -0.46
SCARB2-227ENST00000640957 AHCTF1Q8WYP5 2266 aa12.15□□□□□ -0.47
SCARB2-227ENST00000640957 CACNA1DQ01668 2161 aa12.15□□□□□ -0.47
SCARB2-227ENST00000640957 EREGO14944 169 aa12.14□□□□□ -0.47
SCARB2-227ENST00000640957 HOXC4P09017 264 aaPredicted RBP12.14□□□□□ -0.47
SCARB2-227ENST00000640957 SMIM10L1P0DMW3 83 aa12.14□□□□□ -0.47
SCARB2-227ENST00000640957 HNRNPA2B1P22626 353 aaKnown RBP12.14□□□□□ -0.47
SCARB2-227ENST00000640957 RUNX1Q01196 453 aa12.14□□□□□ -0.47
SCARB2-227ENST00000640957 OR10AD1Q8NGE0 317 aa12.14□□□□□ -0.47
SCARB2-227ENST00000640957 SMIM10Q96HG1 83 aa12.14□□□□□ -0.47
SCARB2-227ENST00000640957 MRGPRX1Q96LB2 322 aa12.14□□□□□ -0.47
SCARB2-227ENST00000640957 ZNF2Q9BSG1 426 aaPredicted RBP12.14□□□□□ -0.47
SCARB2-227ENST00000640957 VN1R1Q9GZP7 353 aa12.14□□□□□ -0.47
SCARB2-227ENST00000640957 LPAR5Q9H1C0 372 aa12.14□□□□□ -0.47
SCARB2-227ENST00000640957 RAB18Q9NP72 206 aa12.14□□□□□ -0.47
SCARB2-227ENST00000640957 G6PC2Q9NQR9 355 aa12.14□□□□□ -0.47
SCARB2-227ENST00000640957 SLC17A5Q9NRA2 495 aa12.14□□□□□ -0.47
SCARB2-227ENST00000640957 KLF15Q9UIH9 416 aa12.14□□□□□ -0.47
SCARB2-227ENST00000640957 NXT1Q9UKK6 140 aaKnown RBP12.14□□□□□ -0.47
SCARB2-227ENST00000640957 CA14Q9ULX7 337 aa12.14□□□□□ -0.47
SCARB2-227ENST00000640957 STARD10Q9Y365 291 aa12.14□□□□□ -0.47
SCARB2-227ENST00000640957 A0A1B0GTQ1 180 aa12.14□□□□□ -0.47
SCARB2-227ENST00000640957 NUDT19A8MXV4 375 aa12.14□□□□□ -0.47
SCARB2-227ENST00000640957 TSTD3H0UI37 97 aa12.14□□□□□ -0.47
SCARB2-227ENST00000640957 H3BML4 177 aa12.14□□□□□ -0.47
SCARB2-227ENST00000640957 AKT2P31751 481 aa12.14□□□□□ -0.47
SCARB2-227ENST00000640957 Q6ZS52 159 aa12.14□□□□□ -0.47
SCARB2-227ENST00000640957 C19orf47Q8N9M1 422 aaKnown RBP12.14□□□□□ -0.47
SCARB2-227ENST00000640957 OR5L1Q8NGL2 311 aa12.14□□□□□ -0.47
SCARB2-227ENST00000640957 PACRGQ96M98 296 aaPredicted RBP12.14□□□□□ -0.47
SCARB2-227ENST00000640957 TAAR9Q96RI9 348 aa12.14□□□□□ -0.47
SCARB2-227ENST00000640957 ZNF587BE7ETH6 402 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 ZNF264O43296 627 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 SLC35E2P0CK97 266 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 MYF5P13349 255 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 BLVRBP30043 206 aaPredicted RBP12.13□□□□□ -0.47
SCARB2-227ENST00000640957 SLC6A9P48067 706 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 KIR2DS3Q14952 304 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 CHRFAM7AQ494W8 412 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 WDR25Q64LD2 544 aaPredicted RBP12.13□□□□□ -0.47
SCARB2-227ENST00000640957 C6orf201Q7Z4U5 140 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 OR52M1Q8NGK5 317 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 PRTFDC1Q9NRG1 225 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 PLRG1O43660 514 aaKnown RBP12.13□□□□□ -0.47
SCARB2-227ENST00000640957 JTBO76095 146 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 UTS2O95399 124 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 ZNF20P17024 532 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 CHATP28329 748 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 CTHP32929 405 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 THBS4P35443 961 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 OR1D4P47884 311 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 AFF3P51826 1226 aaKnown RBP12.13□□□□□ -0.47
SCARB2-227ENST00000640957 TAS2R60P59551 318 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 SLC35A1P78382 337 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 UBE2V2Q15819 145 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 TEX30Q5JUR7 227 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 TMEM92Q6UXU6 159 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 REC114Q7Z4M0 266 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 RNASE11Q8TAA1 199 aaKnown RBP12.13□□□□□ -0.47
SCARB2-227ENST00000640957 ABHD5Q8WTS1 349 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 TM4SF19Q96DZ7 209 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 TMEM59Q9BXS4 323 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 CHST11Q9NPF2 352 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 LUZP4Q9P127 313 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 PPP4R1LQ9P1A2 415 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 RP1L1Q8IWN7 2480 aaPredicted RBP12.13□□□□□ -0.47
SCARB2-227ENST00000640957 ZNF407Q9C0G0 2248 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 CLDN4O14493 209 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 FOXS1O43638 330 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 TNFP01375 233 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 MBPP02686 304 aaPredicted RBP12.13□□□□□ -0.47
SCARB2-227ENST00000640957 THEGLP0DJG4 465 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 ZNF117Q03924 483 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 OGFOD3Q6PK18 319 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 MUCL1Q96DR8 90 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 OR5B2Q96R09 309 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 SCRT1Q9BWW7 348 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 R4GMQ9 66 aa12.13□□□□□ -0.47
SCARB2-227ENST00000640957 CHD3Q12873 2000 aaKnown RBP12.13□□□□□ -0.47
SCARB2-227ENST00000640957 OR5H15A6NDH6 313 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms