RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 OR4F15Q8NGB8 312 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 OR6T1Q8NGN1 323 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 OR5J2Q8NH18 312 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 OR10A6Q8NH74 314 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 ADAMTS16Q8TE57 1224 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 CHPT1Q8WUD6 406 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 BCL2L2Q92843 193 aaPredicted RBP2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 TAMM41Q96BW9 452 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 SLC25A36Q96CQ1 311 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 LRRC58Q96CX6 371 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 DNAJA3Q96EY1 480 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 ZNF75AQ96N20 296 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 SLC38A2Q96QD8 506 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 OR2M2Q96R28 347 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 MCHR1Q99705 422 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 PRSS27Q9BQR3 290 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 WFDC6Q9BQY6 131 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 ZNF442Q9H7R0 627 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 RAB9BQ9NP90 201 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 SAR1AQ9NR31 198 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 FGFR1OP2Q9NVK5 253 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 GID8Q9NWU2 228 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 CTSZQ9UBR2 303 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 NSG2Q9Y328 171 aa2.88□□□□□ -1.95
CKS1BP3-201ENST00000600888 A0A096LNT2 108 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 TRAV34A0A0B4J273 112 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 IGHV1-18A0A0C4DH31 117 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 IGHV3-38A0A0C4DH36 116 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 IQCMA0A1B0GVH7 501 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 A0A1B0GVY2 172 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 TRIM64A6NGJ6 449 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 TRIM64BA6NI03 449 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 FAM220BPB1ANY3 271 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 M0R1B8 84 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 NDUFS8O00217 210 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 NDUFAB1O14561 156 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 MRASO14807 208 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 CCDC22O60826 627 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 ENTPD5O75356 428 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 OR5F1O95221 314 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 HPRP00739 348 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 MT-ND1P03886 318 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 OPN1SWP03999 348 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 CSF3P09919 207 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 CECR9P0C854 216 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 NQO1P15559 274 aaKnown RBP2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 SLC25A16P16260 332 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 SELEP16581 610 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 C4BPBP20851 252 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 AQP1P29972 269 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 GPR183P32249 361 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 KDELR2P33947 212 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 ARR3P36575 388 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 ACVR1BP36896 505 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 MDH1P40925 334 aaKnown RBP2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 OR3A3P47888 321 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 EVX1P49640 407 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 FABP6P51161 128 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 EFNA4P52798 201 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 UBE2NP61088 152 aaKnown RBP2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 BTG1P62324 171 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 SELENOWP63302 87 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 NAAAQ02083 359 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 CHRNB3Q05901 458 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 LOXL1Q08397 574 aaPredicted RBP2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 PUDPQ08623 228 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 CD300CQ08708 224 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 PMS2P3Q13401 168 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 C1DQ13901 141 aaKnown RBP2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 RAB35Q15286 201 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 HIST3H3Q16695 136 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 CLEC12BQ2HXU8 276 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 CEACAM16Q2WEN9 425 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 ANKDD1AQ495B1 522 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 HIKESHIQ53FT3 197 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 HSP90B2PQ58FF3 399 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 C9orf135Q5VTT2 229 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 REP15Q6BDI9 236 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 TTC33Q6PID6 262 aaPredicted RBP2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 HACD2Q6Y1H2 254 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 WDR88Q6ZMY6 472 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 PIWIL3Q7Z3Z3 882 aaKnown RBP2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 DPPA2Q7Z7J5 298 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 KDM8Q8N371 416 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 GPR137CQ8N3F9 429 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 OR4D11Q8NGI4 311 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 OR6X1Q8NH79 312 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 FNDC8Q8TC99 324 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 NPRL2Q8WTW4 380 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 C10orf82Q8WW14 230 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 TMEM54Q969K7 222 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 BSCL2Q96G97 398 aaPredicted RBP2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 SLC25A44Q96H78 314 aaPredicted RBP2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 TSSK2Q96PF2 358 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 ALKBH3Q96Q83 286 aaPredicted RBP2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 SMR3AQ99954 134 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 HOPXQ9BPY8 73 aaPredicted RBP2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 ECSITQ9BQ95 431 aa2.87□□□□□ -1.95
CKS1BP3-201ENST00000600888 DCTN5Q9BTE1 182 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms