RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 LINC00854A0A1B0GVQ3 168 aa15.15■□□□□ 0.02
SHKBP1-224ENST00000600718 PQLC2LA1A4F0 135 aa15.15■□□□□ 0.02
SHKBP1-224ENST00000600718 M0R1B8 84 aa15.15■□□□□ 0.02
SHKBP1-224ENST00000600718 LANCL1O43813 399 aa15.15■□□□□ 0.02
SHKBP1-224ENST00000600718 CDC14BO60729 498 aa15.15■□□□□ 0.02
SHKBP1-224ENST00000600718 CHRM2P08172 466 aa15.15■□□□□ 0.02
SHKBP1-224ENST00000600718 ERVS71-1P61550 626 aa15.15■□□□□ 0.02
SHKBP1-224ENST00000600718 SLC22A6Q4U2R8 563 aa15.15■□□□□ 0.02
SHKBP1-224ENST00000600718 ZNF57Q68EA5 555 aaPredicted RBP15.15■□□□□ 0.02
SHKBP1-224ENST00000600718 ASCL4Q6XD76 172 aa15.15■□□□□ 0.02
SHKBP1-224ENST00000600718 MARS2Q96GW9 593 aaKnown RBP15.15■□□□□ 0.02
SHKBP1-224ENST00000600718 URM1Q9BTM9 101 aaKnown RBP15.15■□□□□ 0.02
SHKBP1-224ENST00000600718 MRPL15Q9P015 296 aaKnown RBP15.15■□□□□ 0.02
SHKBP1-224ENST00000600718 HMX3A6NHT5 357 aa15.15■□□□□ 0.02
SHKBP1-224ENST00000600718 PLA2G10O15496 165 aa15.15■□□□□ 0.02
SHKBP1-224ENST00000600718 SSX4O60224 188 aa15.15■□□□□ 0.02
SHKBP1-224ENST00000600718 MPIG6BO95866 241 aa15.15■□□□□ 0.02
SHKBP1-224ENST00000600718 CD3GP09693 182 aa15.15■□□□□ 0.02
SHKBP1-224ENST00000600718 CALCRP30988 508 aa15.15■□□□□ 0.02
SHKBP1-224ENST00000600718 GPR176Q14439 515 aa15.15■□□□□ 0.02
SHKBP1-224ENST00000600718 BHLHE23Q8NDY6 225 aa15.15■□□□□ 0.02
SHKBP1-224ENST00000600718 TMEM104Q8NE00 496 aa15.15■□□□□ 0.02
SHKBP1-224ENST00000600718 KLF14Q8TD94 323 aaPredicted RBP15.15■□□□□ 0.02
SHKBP1-224ENST00000600718 GAL3ST1Q99999 423 aa15.15■□□□□ 0.02
SHKBP1-224ENST00000600718 NUDT16L1Q9BRJ7 211 aaKnown RBP15.15■□□□□ 0.02
SHKBP1-224ENST00000600718 TMEM59Q9BXS4 323 aa15.15■□□□□ 0.02
SHKBP1-224ENST00000600718 METTL9Q9H1A3 318 aa15.15■□□□□ 0.02
SHKBP1-224ENST00000600718 CRIM1Q9NZV1 1036 aa15.15■□□□□ 0.02
SHKBP1-224ENST00000600718 IQCF6A8MYZ5 107 aa15.14■□□□□ 0.01
SHKBP1-224ENST00000600718 CRTAPO75718 401 aaPredicted RBP15.14■□□□□ 0.01
SHKBP1-224ENST00000600718 CCKARP32238 428 aa15.14■□□□□ 0.01
SHKBP1-224ENST00000600718 PDZK1IP1Q13113 114 aa15.14■□□□□ 0.01
SHKBP1-224ENST00000600718 ALKBH2Q6NS38 261 aa15.14■□□□□ 0.01
SHKBP1-224ENST00000600718 DNM1P46Q6ZS02 220 aa15.14■□□□□ 0.01
SHKBP1-224ENST00000600718 PXT1Q8NFP0 134 aa15.14■□□□□ 0.01
SHKBP1-224ENST00000600718 OR52I2Q8NH67 350 aa15.14■□□□□ 0.01
SHKBP1-224ENST00000600718 OR5P3Q8WZ94 311 aa15.14■□□□□ 0.01
SHKBP1-224ENST00000600718 LPAR5Q9H1C0 372 aa15.14■□□□□ 0.01
SHKBP1-224ENST00000600718 SPEF1Q9Y4P9 236 aa15.14■□□□□ 0.01
SHKBP1-224ENST00000600718 RAB27BO00194 218 aa15.13■□□□□ 0.01
SHKBP1-224ENST00000600718 CRYAAP02489 173 aa15.13■□□□□ 0.01
SHKBP1-224ENST00000600718 PSG7Q13046 419 aa15.13■□□□□ 0.01
SHKBP1-224ENST00000600718 ZNF718Q3SXZ3 478 aa15.13■□□□□ 0.01
SHKBP1-224ENST00000600718 RNASE12Q5GAN4 147 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-224ENST00000600718 MZT2BQ6NZ67 158 aa15.13■□□□□ 0.01
SHKBP1-224ENST00000600718 NRARPQ7Z6K4 114 aa15.13■□□□□ 0.01
SHKBP1-224ENST00000600718 ZSCAN4Q8NAM6 433 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-224ENST00000600718 ACBD4Q8NC06 268 aa15.13■□□□□ 0.01
SHKBP1-224ENST00000600718 GRPEL2Q8TAA5 225 aa15.13■□□□□ 0.01
SHKBP1-224ENST00000600718 HPSE2Q8WWQ2 592 aa15.13■□□□□ 0.01
SHKBP1-224ENST00000600718 SLC22A4Q9H015 551 aa15.13■□□□□ 0.01
SHKBP1-224ENST00000600718 C11orf54Q9H0W9 315 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-224ENST00000600718 BANF2Q9H503 90 aa15.13■□□□□ 0.01
SHKBP1-224ENST00000600718 ELL3Q9HB65 397 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-224ENST00000600718 NOP16Q9Y3C1 178 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-224ENST00000600718 ORC5O43913 435 aa15.13■□□□□ 0.01
SHKBP1-224ENST00000600718 LILRA1O75019 489 aa15.13■□□□□ 0.01
SHKBP1-224ENST00000600718 ZNF780AO75290 641 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-224ENST00000600718 PPP3CBP16298 524 aa15.13■□□□□ 0.01
SHKBP1-224ENST00000600718 CHRNB4P30926 498 aa15.13■□□□□ 0.01
SHKBP1-224ENST00000600718 PRSS3P35030 304 aa15.13■□□□□ 0.01
SHKBP1-224ENST00000600718 RSU1Q15404 277 aa15.13■□□□□ 0.01
SHKBP1-224ENST00000600718 MOGAT2Q3SYC2 334 aa15.13■□□□□ 0.01
SHKBP1-224ENST00000600718 RNF170Q96K19 258 aa15.13■□□□□ 0.01
SHKBP1-224ENST00000600718 AUNIPQ9H7T9 357 aa15.13■□□□□ 0.01
SHKBP1-224ENST00000600718 PCDHB16Q9NRJ7 776 aa15.13■□□□□ 0.01
SHKBP1-224ENST00000600718 SULT1C2O00338 296 aa15.12■□□□□ 0.01
SHKBP1-224ENST00000600718 SPRY1O43609 319 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-224ENST00000600718 MGMTP16455 207 aa15.12■□□□□ 0.01
SHKBP1-224ENST00000600718 CA6P23280 308 aa15.12■□□□□ 0.01
SHKBP1-224ENST00000600718 MPV17P39210 176 aa15.12■□□□□ 0.01
SHKBP1-224ENST00000600718 VEGFCP49767 419 aa15.12■□□□□ 0.01
SHKBP1-224ENST00000600718 ASCL1P50553 236 aa15.12■□□□□ 0.01
SHKBP1-224ENST00000600718 GNG2P59768 71 aa15.12■□□□□ 0.01
SHKBP1-224ENST00000600718 RPS27AP62979 156 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-224ENST00000600718 MBNL2Q5VZF2 373 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-224ENST00000600718 TOMM5Q8N4H5 51 aa15.12■□□□□ 0.01
SHKBP1-224ENST00000600718 FAM89BQ8N5H3 189 aa15.12■□□□□ 0.01
SHKBP1-224ENST00000600718 OR56B1Q8NGI3 324 aa15.12■□□□□ 0.01
SHKBP1-224ENST00000600718 OR10R2Q8NGX6 335 aa15.12■□□□□ 0.01
SHKBP1-224ENST00000600718 TMEM246Q9BRR3 403 aa15.12■□□□□ 0.01
SHKBP1-224ENST00000600718 FGF23Q9GZV9 251 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-224ENST00000600718 IL36GQ9NZH8 169 aa15.12■□□□□ 0.01
SHKBP1-224ENST00000600718 COQ3Q9NZJ6 369 aa15.12■□□□□ 0.01
SHKBP1-224ENST00000600718 A0A1W2PP11 408 aa15.11■□□□□ 0.01
SHKBP1-224ENST00000600718 OR5B21A6NL26 309 aa15.11■□□□□ 0.01
SHKBP1-224ENST00000600718 ZNF732B4DXR9 585 aa15.11■□□□□ 0.01
SHKBP1-224ENST00000600718 LYRM1O43325 122 aa15.11■□□□□ 0.01
SHKBP1-224ENST00000600718 CSTBP04080 98 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-224ENST00000600718 PTHLHP12272 177 aa15.11■□□□□ 0.01
SHKBP1-224ENST00000600718 SERPINA2P20848 420 aa15.11■□□□□ 0.01
SHKBP1-224ENST00000600718 KITLGP21583 273 aa15.11■□□□□ 0.01
SHKBP1-224ENST00000600718 GCH1P30793 250 aa15.11■□□□□ 0.01
SHKBP1-224ENST00000600718 GDNFP39905 211 aa15.11■□□□□ 0.01
SHKBP1-224ENST00000600718 RFX2P48378 723 aa15.11■□□□□ 0.01
SHKBP1-224ENST00000600718 GPM6AP51674 278 aa15.11■□□□□ 0.01
SHKBP1-224ENST00000600718 MTFR2Q6P444 385 aa15.11■□□□□ 0.01
SHKBP1-224ENST00000600718 SEZ6L2Q6UXD5 910 aa15.11■□□□□ 0.01
SHKBP1-224ENST00000600718 C22orf34Q6ZV56 151 aa15.11■□□□□ 0.01
SHKBP1-224ENST00000600718 SAXO1Q8IYX7 474 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms