RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 ALOX5APP20292 161 aa14.12□□□□□ -0.15
RETREG3-210ENST00000590541 ANOS1P23352 680 aa14.12□□□□□ -0.15
RETREG3-210ENST00000590541 FASP25445 335 aa14.12□□□□□ -0.15
RETREG3-210ENST00000590541 DCTDP32321 178 aa14.12□□□□□ -0.15
RETREG3-210ENST00000590541 DAPP51397 102 aa14.12□□□□□ -0.15
RETREG3-210ENST00000590541 PSMA6P60900 246 aaKnown RBP14.12□□□□□ -0.15
RETREG3-210ENST00000590541 APOFQ13790 326 aa14.12□□□□□ -0.15
RETREG3-210ENST00000590541 PTGES3Q15185 160 aaKnown RBP14.12□□□□□ -0.15
RETREG3-210ENST00000590541 ATP6AP1Q15904 470 aa14.12□□□□□ -0.15
RETREG3-210ENST00000590541 TMEM236Q5W0B7 351 aa14.12□□□□□ -0.15
RETREG3-210ENST00000590541 CRIP3Q6Q6R5 217 aa14.12□□□□□ -0.15
RETREG3-210ENST00000590541 KRT77Q7Z794 578 aa14.12□□□□□ -0.15
RETREG3-210ENST00000590541 CMTM4Q8IZR5 234 aa14.12□□□□□ -0.15
RETREG3-210ENST00000590541 OR4C13Q8NGP0 309 aa14.12□□□□□ -0.15
RETREG3-210ENST00000590541 OR2T6Q8NHC8 308 aa14.12□□□□□ -0.15
RETREG3-210ENST00000590541 ASB17Q8WXJ9 295 aa14.12□□□□□ -0.15
RETREG3-210ENST00000590541 DUS3LQ96G46 650 aaKnown RBP14.12□□□□□ -0.15
RETREG3-210ENST00000590541 AP4S1Q9Y587 144 aa14.12□□□□□ -0.15
RETREG3-210ENST00000590541 hCG_1807616A0A1W2PRN6 198 aa14.11□□□□□ -0.15
RETREG3-210ENST00000590541 G3V2T6 193 aa14.11□□□□□ -0.15
RETREG3-210ENST00000590541 K7EIL1 84 aa14.11□□□□□ -0.15
RETREG3-210ENST00000590541 ZNF254O75437 659 aa14.11□□□□□ -0.15
RETREG3-210ENST00000590541 MUC1P15941 1255 aaPredicted RBP14.11□□□□□ -0.15
RETREG3-210ENST00000590541 NAA10P41227 235 aaPredicted RBP14.11□□□□□ -0.15
RETREG3-210ENST00000590541 UBE2E1P51965 193 aa14.11□□□□□ -0.15
RETREG3-210ENST00000590541 LY6EQ16553 131 aa14.11□□□□□ -0.15
RETREG3-210ENST00000590541 WDR38Q5JTN6 314 aa14.11□□□□□ -0.15
RETREG3-210ENST00000590541 ZDHHC13Q8IUH4 622 aa14.11□□□□□ -0.15
RETREG3-210ENST00000590541 FAM216BQ8N7L0 139 aa14.11□□□□□ -0.15
RETREG3-210ENST00000590541 C17orf50Q8WW18 174 aa14.11□□□□□ -0.15
RETREG3-210ENST00000590541 MNTQ99583 582 aa14.11□□□□□ -0.15
RETREG3-210ENST00000590541 SSX3Q99909 188 aa14.11□□□□□ -0.15
RETREG3-210ENST00000590541 MICU1Q9BPX6 476 aa14.11□□□□□ -0.15
RETREG3-210ENST00000590541 DCTN5Q9BTE1 182 aa14.11□□□□□ -0.15
RETREG3-210ENST00000590541 PAPOLGQ9BWT3 736 aaKnown RBP14.11□□□□□ -0.15
RETREG3-210ENST00000590541 MROQ9BYG7 248 aa14.11□□□□□ -0.15
RETREG3-210ENST00000590541 RANBP3Q9H6Z4 567 aaPredicted RBP14.11□□□□□ -0.15
RETREG3-210ENST00000590541 BRD7Q9NPI1 651 aa14.11□□□□□ -0.15
RETREG3-210ENST00000590541 KRT84Q9NSB2 600 aa14.11□□□□□ -0.15
RETREG3-210ENST00000590541 TMEM210A6NLX4 147 aa14.1□□□□□ -0.15
RETREG3-210ENST00000590541 ADARB2-AS1A8MUL3 147 aa14.1□□□□□ -0.15
RETREG3-210ENST00000590541 CST4P01036 141 aa14.1□□□□□ -0.15
RETREG3-210ENST00000590541 ATP6V1B1P15313 513 aa14.1□□□□□ -0.15
RETREG3-210ENST00000590541 EMX1Q04741 257 aaPredicted RBP14.1□□□□□ -0.15
RETREG3-210ENST00000590541 C1orf146Q5VVC0 180 aa14.1□□□□□ -0.15
RETREG3-210ENST00000590541 CCBE1Q6UXH8 406 aaPredicted RBP14.1□□□□□ -0.15
RETREG3-210ENST00000590541 C11orf53Q8IXP5 236 aa14.1□□□□□ -0.15
RETREG3-210ENST00000590541 BBS1Q8NFJ9 593 aa14.1□□□□□ -0.15
RETREG3-210ENST00000590541 OR1M1Q8NGA1 313 aa14.1□□□□□ -0.15
RETREG3-210ENST00000590541 R3HDM4Q96D70 268 aa14.1□□□□□ -0.15
RETREG3-210ENST00000590541 AJUBAQ96IF1 538 aa14.1□□□□□ -0.15
RETREG3-210ENST00000590541 RTL8AQ9BWD3 113 aa14.1□□□□□ -0.15
RETREG3-210ENST00000590541 TLNRD1Q9H1K6 362 aa14.1□□□□□ -0.15
RETREG3-210ENST00000590541 H2AFY2Q9P0M6 372 aaPredicted RBP14.1□□□□□ -0.15
RETREG3-210ENST00000590541 ZNF319Q9P2F9 582 aa14.1□□□□□ -0.15
RETREG3-210ENST00000590541 LRP12Q9Y561 859 aa14.1□□□□□ -0.15
RETREG3-210ENST00000590541 TENM3Q9P273 2699 aa14.09□□□□□ -0.15
RETREG3-210ENST00000590541 A0A0U1RQV5 110 aa14.09□□□□□ -0.15
RETREG3-210ENST00000590541 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.09□□□□□ -0.15
RETREG3-210ENST00000590541 FBXO24O75426 580 aa14.09□□□□□ -0.15
RETREG3-210ENST00000590541 CD28P10747 220 aa14.09□□□□□ -0.15
RETREG3-210ENST00000590541 AMY2BP19961 511 aa14.09□□□□□ -0.15
RETREG3-210ENST00000590541 ACTR3P61158 418 aa14.09□□□□□ -0.15
RETREG3-210ENST00000590541 ROM1Q03395 351 aa14.09□□□□□ -0.15
RETREG3-210ENST00000590541 ACSM1Q08AH1 577 aa14.09□□□□□ -0.15
RETREG3-210ENST00000590541 MICBQ29980 383 aa14.09□□□□□ -0.15
RETREG3-210ENST00000590541 GFOD2Q3B7J2 385 aa14.09□□□□□ -0.15
RETREG3-210ENST00000590541 KDM4DQ6B0I6 523 aa14.09□□□□□ -0.15
RETREG3-210ENST00000590541 KRT74Q7RTS7 529 aa14.09□□□□□ -0.15
RETREG3-210ENST00000590541 ZNF679Q8IYX0 411 aa14.09□□□□□ -0.15
RETREG3-210ENST00000590541 C8orf46Q8TAG6 207 aa14.09□□□□□ -0.15
RETREG3-210ENST00000590541 RORBQ92753 470 aa14.09□□□□□ -0.15
RETREG3-210ENST00000590541 C12orf43Q96C57 262 aaKnown RBP14.09□□□□□ -0.15
RETREG3-210ENST00000590541 SEH1LQ96EE3 360 aa14.09□□□□□ -0.15
RETREG3-210ENST00000590541 OSBPL10Q9BXB5 764 aa14.09□□□□□ -0.15
RETREG3-210ENST00000590541 GABARAPL1Q9H0R8 117 aa14.09□□□□□ -0.15
RETREG3-210ENST00000590541 RHBDD3Q9Y3P4 386 aa14.09□□□□□ -0.15
RETREG3-210ENST00000590541 NDUFB3O43676 98 aa14.08□□□□□ -0.16
RETREG3-210ENST00000590541 MAP2K3P46734 347 aa14.08□□□□□ -0.16
RETREG3-210ENST00000590541 EFNB1P98172 346 aa14.08□□□□□ -0.16
RETREG3-210ENST00000590541 IKZF1Q13422 519 aa14.08□□□□□ -0.16
RETREG3-210ENST00000590541 ZNF829Q3KNS6 432 aaPredicted RBP14.08□□□□□ -0.16
RETREG3-210ENST00000590541 FAM76BQ5HYJ3 339 aa14.08□□□□□ -0.16
RETREG3-210ENST00000590541 SLX4IPQ5VYV7 408 aa14.08□□□□□ -0.16
RETREG3-210ENST00000590541 NXNL2Q5VZ03 156 aa14.08□□□□□ -0.16
RETREG3-210ENST00000590541 MEPCEQ7L2J0 689 aaKnown RBP14.08□□□□□ -0.16
RETREG3-210ENST00000590541 SLC36A1Q7Z2H8 476 aa14.08□□□□□ -0.16
RETREG3-210ENST00000590541 WDR86Q86TI4 376 aa14.08□□□□□ -0.16
RETREG3-210ENST00000590541 NDUFA11Q86Y39 141 aa14.08□□□□□ -0.16
RETREG3-210ENST00000590541 OR4F17Q8NGA8 305 aa14.08□□□□□ -0.16
RETREG3-210ENST00000590541 OR8B12Q8NGG6 310 aa14.08□□□□□ -0.16
RETREG3-210ENST00000590541 OR10Z1Q8NGY1 313 aa14.08□□□□□ -0.16
RETREG3-210ENST00000590541 LRRC29Q8WV35 223 aa14.08□□□□□ -0.16
RETREG3-210ENST00000590541 OR4F4Q96R69 305 aa14.08□□□□□ -0.16
RETREG3-210ENST00000590541 CNN2Q99439 309 aaKnown RBP14.08□□□□□ -0.16
RETREG3-210ENST00000590541 TMEM269A0A1B0GVZ9 245 aa14.07□□□□□ -0.16
RETREG3-210ENST00000590541 CCDC182A6NF36 153 aa14.07□□□□□ -0.16
RETREG3-210ENST00000590541 ZAR1LA6NP61 321 aa14.07□□□□□ -0.16
RETREG3-210ENST00000590541 CHST1O43916 411 aa14.07□□□□□ -0.16
RETREG3-210ENST00000590541 CIB2O75838 187 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms