RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 MTCP1P56278 107 aa13.05□□□□□ -0.32
RPRD1A-208ENST00000589050 HSD17B12Q53GQ0 312 aa13.05□□□□□ -0.32
RPRD1A-208ENST00000589050 HAGHLQ6PII5 290 aaPredicted RBP13.05□□□□□ -0.32
RPRD1A-208ENST00000589050 PRSS57Q6UWY2 283 aa13.05□□□□□ -0.32
RPRD1A-208ENST00000589050 LHFPL2Q6ZUX7 228 aa13.05□□□□□ -0.32
RPRD1A-208ENST00000589050 C11orf53Q8IXP5 236 aa13.05□□□□□ -0.32
RPRD1A-208ENST00000589050 HPS1Q92902 700 aa13.05□□□□□ -0.32
RPRD1A-208ENST00000589050 SPACA5Q96QH8 159 aa13.05□□□□□ -0.32
RPRD1A-208ENST00000589050 DCAF16Q9NXF7 216 aa13.05□□□□□ -0.32
RPRD1A-208ENST00000589050 STUB1Q9UNE7 303 aa13.05□□□□□ -0.32
RPRD1A-208ENST00000589050 FOXJ3Q9UPW0 622 aa13.05□□□□□ -0.32
RPRD1A-208ENST00000589050 ARFGEF3Q5TH69 2177 aa13.04□□□□□ -0.32
RPRD1A-208ENST00000589050 IGKV1-27A0A075B6S5 117 aa13.04□□□□□ -0.32
RPRD1A-208ENST00000589050 TRDV1A0A1B0GX56 115 aa13.04□□□□□ -0.32
RPRD1A-208ENST00000589050 CLDN25C9JDP6 229 aa13.04□□□□□ -0.32
RPRD1A-208ENST00000589050 PPIHO43447 177 aaKnown RBP13.04□□□□□ -0.32
RPRD1A-208ENST00000589050 ARL6IP5O75915 188 aa13.04□□□□□ -0.32
RPRD1A-208ENST00000589050 CYB5R3P00387 301 aaPredicted RBP13.04□□□□□ -0.32
RPRD1A-208ENST00000589050 MAS1P04201 325 aa13.04□□□□□ -0.32
RPRD1A-208ENST00000589050 BDKRB2P30411 391 aa13.04□□□□□ -0.32
RPRD1A-208ENST00000589050 ZNF181Q2M3W8 571 aa13.04□□□□□ -0.32
RPRD1A-208ENST00000589050 SHEQ5VZ18 495 aa13.04□□□□□ -0.32
RPRD1A-208ENST00000589050 CD200R1LQ6Q8B3 271 aa13.04□□□□□ -0.32
RPRD1A-208ENST00000589050 ANGPTL5Q86XS5 388 aa13.04□□□□□ -0.32
RPRD1A-208ENST00000589050 KRTAP1-3Q8IUG1 177 aa13.04□□□□□ -0.32
RPRD1A-208ENST00000589050 C10orf105Q8TEF2 133 aa13.04□□□□□ -0.32
RPRD1A-208ENST00000589050 PHYHIPQ92561 330 aa13.04□□□□□ -0.32
RPRD1A-208ENST00000589050 PIMREGQ9BSJ6 248 aa13.04□□□□□ -0.32
RPRD1A-208ENST00000589050 PPIL3Q9H2H8 161 aaKnown RBP13.04□□□□□ -0.32
RPRD1A-208ENST00000589050 TCF7L1Q9HCS4 588 aa13.04□□□□□ -0.32
RPRD1A-208ENST00000589050 EXOSC4Q9NPD3 245 aaKnown RBP13.04□□□□□ -0.32
RPRD1A-208ENST00000589050 TMEM138Q9NPI0 162 aa13.04□□□□□ -0.32
RPRD1A-208ENST00000589050 RNF7Q9UBF6 113 aa13.04□□□□□ -0.32
RPRD1A-208ENST00000589050 FLNBO75369 2602 aaKnown RBP13.03□□□□□ -0.32
RPRD1A-208ENST00000589050 TMEM178BH3BS89 294 aa13.03□□□□□ -0.32
RPRD1A-208ENST00000589050 J3QT63 122 aa13.03□□□□□ -0.32
RPRD1A-208ENST00000589050 NDUFS8O00217 210 aa13.03□□□□□ -0.32
RPRD1A-208ENST00000589050 PLATP00750 562 aa13.03□□□□□ -0.32
RPRD1A-208ENST00000589050 GALP22466 123 aa13.03□□□□□ -0.32
RPRD1A-208ENST00000589050 GADD45AP24522 165 aa13.03□□□□□ -0.32
RPRD1A-208ENST00000589050 TMEM33P57088 247 aa13.03□□□□□ -0.32
RPRD1A-208ENST00000589050 RIN1Q13671 783 aa13.03□□□□□ -0.32
RPRD1A-208ENST00000589050 KISS1Q15726 138 aa13.03□□□□□ -0.32
RPRD1A-208ENST00000589050 DDI2Q5TDH0 399 aa13.03□□□□□ -0.32
RPRD1A-208ENST00000589050 WDR82Q6UXN9 313 aa13.03□□□□□ -0.32
RPRD1A-208ENST00000589050 DNM1P46Q6ZS02 220 aa13.03□□□□□ -0.32
RPRD1A-208ENST00000589050 RNF144BQ7Z419 303 aa13.03□□□□□ -0.32
RPRD1A-208ENST00000589050 PEG10Q86TG7 708 aaKnown RBP13.03□□□□□ -0.32
RPRD1A-208ENST00000589050 SATL1Q86VE3 508 aa13.03□□□□□ -0.32
RPRD1A-208ENST00000589050 CALHM1Q8IU99 346 aa13.03□□□□□ -0.32
RPRD1A-208ENST00000589050 C1orf87Q8N0U7 546 aa13.03□□□□□ -0.32
RPRD1A-208ENST00000589050 BOLLQ8N9W6 283 aaKnown RBP13.03□□□□□ -0.32
RPRD1A-208ENST00000589050 OR52N4Q8NGI2 321 aa13.03□□□□□ -0.32
RPRD1A-208ENST00000589050 LRRC29Q8WV35 223 aa13.03□□□□□ -0.32
RPRD1A-208ENST00000589050 AQP3Q92482 292 aa13.03□□□□□ -0.32
RPRD1A-208ENST00000589050 RFT1Q96AA3 541 aa13.03□□□□□ -0.32
RPRD1A-208ENST00000589050 YIPF6Q96EC8 236 aa13.03□□□□□ -0.32
RPRD1A-208ENST00000589050 CPNE2Q96FN4 548 aaPredicted RBP13.03□□□□□ -0.32
RPRD1A-208ENST00000589050 SLITRK2Q9H156 845 aa13.03□□□□□ -0.32
RPRD1A-208ENST00000589050 OR51E2Q9H255 320 aa13.03□□□□□ -0.32
RPRD1A-208ENST00000589050 METTL17Q9H7H0 456 aaPredicted RBP13.03□□□□□ -0.32
RPRD1A-208ENST00000589050 SCOCQ9UIL1 159 aa13.03□□□□□ -0.32
RPRD1A-208ENST00000589050 SSR3Q9UNL2 185 aa13.03□□□□□ -0.32
RPRD1A-208ENST00000589050 POLQO75417 2590 aa13.03□□□□□ -0.32
RPRD1A-208ENST00000589050 ITPR2Q14571 2701 aa13.02□□□□□ -0.32
RPRD1A-208ENST00000589050 IGHV4-30-2A0A087WSY4 118 aa13.02□□□□□ -0.33
RPRD1A-208ENST00000589050 TRIM64BA6NI03 449 aa13.02□□□□□ -0.33
RPRD1A-208ENST00000589050 SYNGR1O43759 233 aa13.02□□□□□ -0.33
RPRD1A-208ENST00000589050 RHBDL1O75783 438 aa13.02□□□□□ -0.33
RPRD1A-208ENST00000589050 ALDOBP05062 364 aa13.02□□□□□ -0.33
RPRD1A-208ENST00000589050 TFAP2AP05549 437 aa13.02□□□□□ -0.33
RPRD1A-208ENST00000589050 SRMP19623 302 aa13.02□□□□□ -0.33
RPRD1A-208ENST00000589050 GIFP27352 417 aa13.02□□□□□ -0.33
RPRD1A-208ENST00000589050 CALRP27797 417 aaKnown RBP13.02□□□□□ -0.33
RPRD1A-208ENST00000589050 GPR6P46095 362 aaPredicted RBP13.02□□□□□ -0.33
RPRD1A-208ENST00000589050 POU3F4P49335 361 aa13.02□□□□□ -0.33
RPRD1A-208ENST00000589050 AVPI1Q5T686 147 aa13.02□□□□□ -0.33
RPRD1A-208ENST00000589050 C22orf42Q6IC83 251 aa13.02□□□□□ -0.33
RPRD1A-208ENST00000589050 OR13F1Q8NGS4 319 aa13.02□□□□□ -0.33
RPRD1A-208ENST00000589050 ZNF671Q8TAW3 534 aa13.02□□□□□ -0.33
RPRD1A-208ENST00000589050 TMIGD2Q96BF3 282 aa13.02□□□□□ -0.33
RPRD1A-208ENST00000589050 TIMD4Q96H15 378 aa13.02□□□□□ -0.33
RPRD1A-208ENST00000589050 Q96MF0 132 aa13.02□□□□□ -0.33
RPRD1A-208ENST00000589050 GPER1Q99527 375 aa13.02□□□□□ -0.33
RPRD1A-208ENST00000589050 CHCHD6Q9BRQ6 235 aa13.02□□□□□ -0.33
RPRD1A-208ENST00000589050 PKIBQ9C010 78 aa13.02□□□□□ -0.33
RPRD1A-208ENST00000589050 POLDIP2Q9Y2S7 368 aa13.02□□□□□ -0.33
RPRD1A-208ENST00000589050 NPTNQ9Y639 398 aa13.02□□□□□ -0.33
RPRD1A-208ENST00000589050 CSMD2Q7Z408 3487 aa13.01□□□□□ -0.33
RPRD1A-208ENST00000589050 LOC100506127A0A0U1RQW1 187 aa13.01□□□□□ -0.33
RPRD1A-208ENST00000589050 AKR7A2O43488 359 aa13.01□□□□□ -0.33
RPRD1A-208ENST00000589050 ZNF205O95201 554 aa13.01□□□□□ -0.33
RPRD1A-208ENST00000589050 MPZP25189 248 aa13.01□□□□□ -0.33
RPRD1A-208ENST00000589050 ZNF93P35789 620 aaPredicted RBP13.01□□□□□ -0.33
RPRD1A-208ENST00000589050 CFHR2P36980 270 aa13.01□□□□□ -0.33
RPRD1A-208ENST00000589050 ALDH3B2P48448 385 aa13.01□□□□□ -0.33
RPRD1A-208ENST00000589050 GMFBP60983 142 aa13.01□□□□□ -0.33
RPRD1A-208ENST00000589050 HOXA4Q00056 320 aaPredicted RBP13.01□□□□□ -0.33
RPRD1A-208ENST00000589050 IL24Q13007 206 aa13.01□□□□□ -0.33
RPRD1A-208ENST00000589050 FAM201AQ5SY85 155 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 403 ms