RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 OR5A2Q8NGI9 324 aa9.77□□□□□ -0.84
SMAD4-205ENST00000588745 OR10K1Q8NGX5 313 aa9.77□□□□□ -0.84
SMAD4-205ENST00000588745 OR52I2Q8NH67 350 aa9.77□□□□□ -0.84
SMAD4-205ENST00000588745 OR5P3Q8WZ94 311 aa9.77□□□□□ -0.84
SMAD4-205ENST00000588745 HIST1H2AAQ96QV6 131 aa9.77□□□□□ -0.84
SMAD4-205ENST00000588745 NICN1Q9BSH3 213 aa9.77□□□□□ -0.84
SMAD4-205ENST00000588745 URM1Q9BTM9 101 aaKnown RBP9.77□□□□□ -0.84
SMAD4-205ENST00000588745 SLC22A4Q9H015 551 aa9.77□□□□□ -0.84
SMAD4-205ENST00000588745 C11orf54Q9H0W9 315 aaPredicted RBP9.77□□□□□ -0.84
SMAD4-205ENST00000588745 METTL9Q9H1A3 318 aa9.77□□□□□ -0.84
SMAD4-205ENST00000588745 BANF2Q9H503 90 aa9.77□□□□□ -0.84
SMAD4-205ENST00000588745 ELL3Q9HB65 397 aaPredicted RBP9.77□□□□□ -0.84
SMAD4-205ENST00000588745 IL36GQ9NZH8 169 aa9.77□□□□□ -0.84
SMAD4-205ENST00000588745 RBMX2Q9Y388 322 aaKnown RBP9.77□□□□□ -0.84
SMAD4-205ENST00000588745 A0A0A6YYD4 124 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 ZNF732B4DXR9 585 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 LYRM1O43325 122 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 SSX4O60224 188 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 CHRM2P08172 466 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 PPP3CBP16298 524 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 KITLGP21583 273 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 CA6P23280 308 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 GCH1P30793 250 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 RFX2P48378 723 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 VEGFCP49767 419 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 GPM6AP51674 278 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 ADORA2A-AS1P86434 159 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 PDZK1IP1Q13113 114 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 GPR176Q14439 515 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 RSU1Q15404 277 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 ALKBH6Q3KRA9 238 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 ZNF718Q3SXZ3 478 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 FBXL19-AS1Q494R0 122 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 TMEM255AQ5JRV8 349 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 MBNL2Q5VZF2 373 aaKnown RBP9.76□□□□□ -0.85
SMAD4-205ENST00000588745 MTFR2Q6P444 385 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 GDPD3Q7L5L3 318 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 CALHM1Q8IU99 346 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 WFDC8Q8IUA0 241 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 TOMM5Q8N4H5 51 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 ZNF611Q8N823 705 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 ZSCAN4Q8NAM6 433 aaPredicted RBP9.76□□□□□ -0.85
SMAD4-205ENST00000588745 OR56B1Q8NGI3 324 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 OR10R2Q8NGX6 335 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 FCAMRQ8WWV6 532 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 COX4I2Q96KJ9 171 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 ADAT1Q9BUB4 502 aaKnown RBP9.76□□□□□ -0.85
SMAD4-205ENST00000588745 TM2D1Q9BX74 207 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 COQ3Q9NZJ6 369 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 PURGQ9UJV8 347 aaKnown RBP9.76□□□□□ -0.85
SMAD4-205ENST00000588745 NOP16Q9Y3C1 178 aaKnown RBP9.76□□□□□ -0.85
SMAD4-205ENST00000588745 SPEF1Q9Y4P9 236 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 PRR14LQ5THK1 2151 aa9.76□□□□□ -0.85
SMAD4-205ENST00000588745 IGKV1-12A0A0C4DH73 117 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 MEIOCA2RUB1 952 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 WIPF3A6NGB9 483 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 FAM90A27PA6NNH2 459 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 ATP6V1G2-DDX39BF2Z307 99 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 SULT1C2O00338 296 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 IGKV1D-12P01611 117 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 CSTBP04080 98 aaKnown RBP9.75□□□□□ -0.85
SMAD4-205ENST00000588745 THBDP07204 575 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 SPNP16150 400 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 CPT2P23786 658 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 CD40P25942 277 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 PRSS3P35030 304 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 HAAOP46952 286 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 SRP9P49458 86 aaKnown RBP9.75□□□□□ -0.85
SMAD4-205ENST00000588745 GNG3P63215 75 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 NKX6-1P78426 367 aaPredicted RBP9.75□□□□□ -0.85
SMAD4-205ENST00000588745 KLF9Q13886 244 aaPredicted RBP9.75□□□□□ -0.85
SMAD4-205ENST00000588745 RGS7BPQ6MZT1 257 aaPredicted RBP9.75□□□□□ -0.85
SMAD4-205ENST00000588745 MZT2BQ6NZ67 158 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 Q6ZTK2 550 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 NRARPQ7Z6K4 114 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 FJX1Q86VR8 437 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 SAXO1Q8IYX7 474 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 FAM89BQ8N5H3 189 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 OR8S1Q8NH09 359 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 OR51F2Q8NH61 342 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 AQP3Q92482 292 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 RNF170Q96K19 258 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 MICU1Q9BPX6 476 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 C7orf50Q9BRJ6 194 aaKnown RBP9.75□□□□□ -0.85
SMAD4-205ENST00000588745 RTL8AQ9BWD3 113 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 SELENOIQ9C0D9 397 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 SCPEP1Q9HB40 452 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 CACNG2Q9Y698 323 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 hCG_2014768A0A024R1R8 64 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 TMEM235A6NFC5 223 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 FOXI3A8MTJ6 420 aaPredicted RBP9.75□□□□□ -0.85
SMAD4-205ENST00000588745 H7C417 338 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 ORC5O43913 435 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 TIMM8AO60220 97 aaPredicted RBP9.75□□□□□ -0.85
SMAD4-205ENST00000588745 HTR3BO95264 441 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 ECDO95905 644 aaPredicted RBP9.75□□□□□ -0.85
SMAD4-205ENST00000588745 LPLP06858 475 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 GTF2F2P13984 249 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 PTAFRP25105 342 aa9.75□□□□□ -0.85
SMAD4-205ENST00000588745 GLRXP35754 106 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms