RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 RBP2P50120 134 aa16.54■□□□□ 0.24
SMPD3-203ENST00000563226 LGALSLQ3ZCW2 172 aaPredicted RBP16.54■□□□□ 0.24
SMPD3-203ENST00000563226 PLCXD3Q63HM9 321 aa16.54■□□□□ 0.24
SMPD3-203ENST00000563226 MAFIPQ8WZ33 124 aa16.54■□□□□ 0.24
SMPD3-203ENST00000563226 GPR137Q96N19 417 aa16.54■□□□□ 0.24
SMPD3-203ENST00000563226 OR2A7Q96R45 310 aa16.54■□□□□ 0.24
SMPD3-203ENST00000563226 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.54■□□□□ 0.24
SMPD3-203ENST00000563226 EIF3KQ9UBQ5 218 aaKnown RBP16.54■□□□□ 0.24
SMPD3-203ENST00000563226 SLC23A1Q9UHI7 598 aa16.54■□□□□ 0.24
SMPD3-203ENST00000563226 ZNF230Q9UIE0 474 aaPredicted RBP16.54■□□□□ 0.24
SMPD3-203ENST00000563226 IGKV1-12A0A0C4DH73 117 aa16.54■□□□□ 0.24
SMPD3-203ENST00000563226 ZNF816-ZNF321PA0A0X1KG74 233 aa16.54■□□□□ 0.24
SMPD3-203ENST00000563226 TM4SF5O14894 197 aa16.54■□□□□ 0.24
SMPD3-203ENST00000563226 IGKV1D-12P01611 117 aa16.54■□□□□ 0.24
SMPD3-203ENST00000563226 NBL1P41271 181 aa16.54■□□□□ 0.24
SMPD3-203ENST00000563226 LHFPL2Q6ZUX7 228 aa16.54■□□□□ 0.24
SMPD3-203ENST00000563226 C6orf201Q7Z4U5 140 aa16.54■□□□□ 0.24
SMPD3-203ENST00000563226 CCDC107Q8WV48 283 aa16.54■□□□□ 0.24
SMPD3-203ENST00000563226 OCSTAMPQ9BR26 566 aa16.54■□□□□ 0.24
SMPD3-203ENST00000563226 METTL9Q9H1A3 318 aa16.54■□□□□ 0.24
SMPD3-203ENST00000563226 GPR160Q9UJ42 338 aa16.54■□□□□ 0.24
SMPD3-203ENST00000563226 IGHG3P01860 377 aa16.53■□□□□ 0.24
SMPD3-203ENST00000563226 ZNF35P13682 527 aa16.53■□□□□ 0.24
SMPD3-203ENST00000563226 CEACAM1P13688 526 aa16.53■□□□□ 0.24
SMPD3-203ENST00000563226 GK2Q14410 553 aaPredicted RBP16.53■□□□□ 0.24
SMPD3-203ENST00000563226 HLXQ14774 488 aaPredicted RBP16.53■□□□□ 0.24
SMPD3-203ENST00000563226 RADILQ96JH8 1075 aa16.53■□□□□ 0.24
SMPD3-203ENST00000563226 MYOZ1Q9NP98 299 aaPredicted RBP16.53■□□□□ 0.24
SMPD3-203ENST00000563226 MUC6Q6W4X9 2439 aa16.53■□□□□ 0.24
SMPD3-203ENST00000563226 ZNF850A8MQ14 1090 aa16.52■□□□□ 0.24
SMPD3-203ENST00000563226 NGFP01138 241 aa16.52■□□□□ 0.24
SMPD3-203ENST00000563226 COX5BP10606 129 aa16.52■□□□□ 0.24
SMPD3-203ENST00000563226 TBPP20226 339 aa16.52■□□□□ 0.24
SMPD3-203ENST00000563226 SSTR2P30874 369 aa16.52■□□□□ 0.24
SMPD3-203ENST00000563226 DHRS2Q13268 280 aa16.52■□□□□ 0.24
SMPD3-203ENST00000563226 RSU1Q15404 277 aa16.52■□□□□ 0.24
SMPD3-203ENST00000563226 SIGIRRQ6IA17 410 aa16.52■□□□□ 0.24
SMPD3-203ENST00000563226 OR56B2PQ8NGI1 322 aa16.52■□□□□ 0.24
SMPD3-203ENST00000563226 OR1K1Q8NGR3 316 aa16.52■□□□□ 0.24
SMPD3-203ENST00000563226 POM121L2Q96KW2 1035 aa16.52■□□□□ 0.24
SMPD3-203ENST00000563226 FAM210AQ96ND0 272 aa16.52■□□□□ 0.24
SMPD3-203ENST00000563226 ST6GALNAC5Q9BVH7 336 aa16.52■□□□□ 0.24
SMPD3-203ENST00000563226 KCNN3Q9UGI6 736 aa16.52■□□□□ 0.24
SMPD3-203ENST00000563226 ITGB1BP2Q9UKP3 347 aa16.52■□□□□ 0.24
SMPD3-203ENST00000563226 LAMA5O15230 3695 aa16.52■□□□□ 0.24
SMPD3-203ENST00000563226 H3BUI4 141 aa16.52■□□□□ 0.23
SMPD3-203ENST00000563226 MSTNO14793 375 aa16.52■□□□□ 0.23
SMPD3-203ENST00000563226 IFNA6P05013 189 aa16.52■□□□□ 0.23
SMPD3-203ENST00000563226 MPGP29372 298 aa16.52■□□□□ 0.23
SMPD3-203ENST00000563226 ZMYND11Q15326 602 aa16.52■□□□□ 0.23
SMPD3-203ENST00000563226 NKAPLQ5M9Q1 402 aa16.52■□□□□ 0.23
SMPD3-203ENST00000563226 FBXW9Q5XUX1 488 aa16.52■□□□□ 0.23
SMPD3-203ENST00000563226 FTMTQ8N4E7 242 aa16.52■□□□□ 0.23
SMPD3-203ENST00000563226 REPIN1Q9BWE0 567 aaKnown RBP16.52■□□□□ 0.23
SMPD3-203ENST00000563226 ZNF175Q9Y473 711 aa16.52■□□□□ 0.23
SMPD3-203ENST00000563226 AKAP13Q12802 2813 aa16.51■□□□□ 0.23
SMPD3-203ENST00000563226 ARR3P36575 388 aa16.51■□□□□ 0.23
SMPD3-203ENST00000563226 FUT6P51993 359 aa16.51■□□□□ 0.23
SMPD3-203ENST00000563226 RAP2BP61225 183 aa16.51■□□□□ 0.23
SMPD3-203ENST00000563226 TSPAN5P62079 268 aa16.51■□□□□ 0.23
SMPD3-203ENST00000563226 TAF9Q16594 264 aa16.51■□□□□ 0.23
SMPD3-203ENST00000563226 NDUFA5Q16718 116 aa16.51■□□□□ 0.23
SMPD3-203ENST00000563226 ASCL4Q6XD76 172 aa16.51■□□□□ 0.23
SMPD3-203ENST00000563226 P4HA3Q7Z4N8 544 aa16.51■□□□□ 0.23
SMPD3-203ENST00000563226 GCNT2Q8N0V5 402 aa16.51■□□□□ 0.23
SMPD3-203ENST00000563226 ADAD2Q8NCV1 583 aaKnown RBP16.51■□□□□ 0.23
SMPD3-203ENST00000563226 BCL2L2Q92843 193 aaPredicted RBP16.51■□□□□ 0.23
SMPD3-203ENST00000563226 HDHD3Q9BSH5 251 aaPredicted RBP16.51■□□□□ 0.23
SMPD3-203ENST00000563226 CLCF1Q9UBD9 225 aa16.51■□□□□ 0.23
SMPD3-203ENST00000563226 OPN4Q9UHM6 478 aa16.51■□□□□ 0.23
SMPD3-203ENST00000563226 STARD10Q9Y365 291 aa16.51■□□□□ 0.23
SMPD3-203ENST00000563226 TRAV17A0A0B4J275 112 aa16.5■□□□□ 0.23
SMPD3-203ENST00000563226 CSTBP04080 98 aaKnown RBP16.5■□□□□ 0.23
SMPD3-203ENST00000563226 AMY2BP19961 511 aa16.5■□□□□ 0.23
SMPD3-203ENST00000563226 OR3A2P47893 321 aa16.5■□□□□ 0.23
SMPD3-203ENST00000563226 VAX1Q5SQQ9 334 aa16.5■□□□□ 0.23
SMPD3-203ENST00000563226 SLC25A42Q86VD7 318 aa16.5■□□□□ 0.23
SMPD3-203ENST00000563226 HOGA1Q86XE5 327 aa16.5■□□□□ 0.23
SMPD3-203ENST00000563226 CALHM1Q8IU99 346 aa16.5■□□□□ 0.23
SMPD3-203ENST00000563226 C12orf45Q8N5I9 185 aaPredicted RBP16.5■□□□□ 0.23
SMPD3-203ENST00000563226 ZDHHC22Q8N966 263 aa16.5■□□□□ 0.23
SMPD3-203ENST00000563226 CPNE2Q96FN4 548 aaPredicted RBP16.5■□□□□ 0.23
SMPD3-203ENST00000563226 FGF23Q9GZV9 251 aaPredicted RBP16.5■□□□□ 0.23
SMPD3-203ENST00000563226 SLC7A11Q9UPY5 501 aa16.5■□□□□ 0.23
SMPD3-203ENST00000563226 KCNMB2Q9Y691 235 aa16.5■□□□□ 0.23
SMPD3-203ENST00000563226 FIGNL2A6NMB9 653 aa16.5■□□□□ 0.23
SMPD3-203ENST00000563226 SS18L1O75177 396 aaPredicted RBP16.5■□□□□ 0.23
SMPD3-203ENST00000563226 SFTPBP07988 381 aa16.5■□□□□ 0.23
SMPD3-203ENST00000563226 ZNF81P51508 661 aa16.5■□□□□ 0.23
SMPD3-203ENST00000563226 ATP1B3P54709 279 aa16.5■□□□□ 0.23
SMPD3-203ENST00000563226 SNU13P55769 128 aaKnown RBP16.5■□□□□ 0.23
SMPD3-203ENST00000563226 PDZK1IP1Q13113 114 aa16.5■□□□□ 0.23
SMPD3-203ENST00000563226 PPP1R1AQ13522 171 aa16.5■□□□□ 0.23
SMPD3-203ENST00000563226 PIGYQ3MUY2 71 aa16.5■□□□□ 0.23
SMPD3-203ENST00000563226 MARCH1Q8TCQ1 289 aa16.5■□□□□ 0.23
SMPD3-203ENST00000563226 APOBEC3DQ96AK3 386 aaPredicted RBP16.5■□□□□ 0.23
SMPD3-203ENST00000563226 HEXA-AS1Q9H8Q6 139 aa16.5■□□□□ 0.23
SMPD3-203ENST00000563226 ZNF629Q9UEG4 869 aaPredicted RBP16.5■□□□□ 0.23
SMPD3-203ENST00000563226 IGKV1D-8A0A087WSZ0 117 aa16.49■□□□□ 0.23
SMPD3-203ENST00000563226 ZNF891A8MT65 544 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms