RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 CCL3L1P16619 93 aa9.91□□□□□ -0.82
SNX6-209ENST00000557265 BLCAPP62952 87 aa9.91□□□□□ -0.82
SNX6-209ENST00000557265 CD83Q01151 205 aa9.91□□□□□ -0.82
SNX6-209ENST00000557265 TMEM95Q3KNT9 176 aa9.91□□□□□ -0.82
SNX6-209ENST00000557265 LINC01590Q5TEZ4 76 aa9.91□□□□□ -0.82
SNX6-209ENST00000557265 ERI1Q8IV48 349 aaKnown RBP9.91□□□□□ -0.82
SNX6-209ENST00000557265 OR5AU1Q8NGC0 362 aa9.91□□□□□ -0.82
SNX6-209ENST00000557265 OR9Q2Q8NGE9 314 aa9.91□□□□□ -0.82
SNX6-209ENST00000557265 OR2T27Q8NH04 317 aa9.91□□□□□ -0.82
SNX6-209ENST00000557265 ZNF671Q8TAW3 534 aa9.91□□□□□ -0.82
SNX6-209ENST00000557265 RPS4Y2Q8TD47 263 aa9.91□□□□□ -0.82
SNX6-209ENST00000557265 LYZL4Q96KX0 146 aa9.91□□□□□ -0.82
SNX6-209ENST00000557265 WWC2-AS2Q96NR7 200 aa9.91□□□□□ -0.82
SNX6-209ENST00000557265 INTS14Q96SY0 518 aa9.91□□□□□ -0.82
SNX6-209ENST00000557265 TSSK6Q9BXA6 273 aa9.91□□□□□ -0.82
SNX6-209ENST00000557265 OR51I2Q9H344 312 aa9.91□□□□□ -0.82
SNX6-209ENST00000557265 TBC1D23Q9NUY8 699 aa9.91□□□□□ -0.82
SNX6-209ENST00000557265 USE1Q9NZ43 259 aa9.91□□□□□ -0.82
SNX6-209ENST00000557265 PITPNC1Q9UKF7 332 aa9.91□□□□□ -0.82
SNX6-209ENST00000557265 COL7A1Q02388 2944 aa9.91□□□□□ -0.82
SNX6-209ENST00000557265 DNAH9Q9NYC9 4486 aa9.9□□□□□ -0.82
SNX6-209ENST00000557265 RFPL4AA6NLU0 287 aa9.9□□□□□ -0.82
SNX6-209ENST00000557265 RFPL4AL1F8VTS6 287 aa9.9□□□□□ -0.82
SNX6-209ENST00000557265 MTRF1O75570 445 aaKnown RBP9.9□□□□□ -0.82
SNX6-209ENST00000557265 GASTP01350 101 aa9.9□□□□□ -0.82
SNX6-209ENST00000557265 VDAC2P45880 294 aaPredicted RBP9.9□□□□□ -0.82
SNX6-209ENST00000557265 SLC35A2P78381 396 aa9.9□□□□□ -0.82
SNX6-209ENST00000557265 CD69Q07108 199 aa9.9□□□□□ -0.82
SNX6-209ENST00000557265 SSX2Q16385 188 aa9.9□□□□□ -0.82
SNX6-209ENST00000557265 DMRTC1Q5HYR2 192 aa9.9□□□□□ -0.82
SNX6-209ENST00000557265 CEP78Q5JTW2 689 aa9.9□□□□□ -0.82
SNX6-209ENST00000557265 RASSF6Q6ZTQ3 369 aa9.9□□□□□ -0.82
SNX6-209ENST00000557265 HDXQ7Z353 690 aa9.9□□□□□ -0.82
SNX6-209ENST00000557265 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.9□□□□□ -0.82
SNX6-209ENST00000557265 CD177Q8N6Q3 437 aa9.9□□□□□ -0.82
SNX6-209ENST00000557265 OR4Q3Q8NH05 313 aa9.9□□□□□ -0.82
SNX6-209ENST00000557265 MALSU1Q96EH3 234 aa9.9□□□□□ -0.82
SNX6-209ENST00000557265 BTBD10Q9BSF8 475 aa9.9□□□□□ -0.82
SNX6-209ENST00000557265 MUC13Q9H3R2 512 aa9.9□□□□□ -0.82
SNX6-209ENST00000557265 SPAG4Q9NPE6 437 aa9.9□□□□□ -0.82
SNX6-209ENST00000557265 IL1RAPQ9NPH3 570 aa9.9□□□□□ -0.82
SNX6-209ENST00000557265 RASL12Q9NYN1 266 aa9.9□□□□□ -0.82
SNX6-209ENST00000557265 SLC1A7O00341 560 aa9.89□□□□□ -0.83
SNX6-209ENST00000557265 CCDC22O60826 627 aa9.89□□□□□ -0.83
SNX6-209ENST00000557265 KRT36O76013 467 aa9.89□□□□□ -0.83
SNX6-209ENST00000557265 IFNGP01579 166 aa9.89□□□□□ -0.83
SNX6-209ENST00000557265 PF4P02776 101 aa9.89□□□□□ -0.83
SNX6-209ENST00000557265 ALDOBP05062 364 aa9.89□□□□□ -0.83
SNX6-209ENST00000557265 ARG1P05089 322 aa9.89□□□□□ -0.83
SNX6-209ENST00000557265 GSTT1P30711 240 aa9.89□□□□□ -0.83
SNX6-209ENST00000557265 PRDX2P32119 198 aa9.89□□□□□ -0.83
SNX6-209ENST00000557265 CEBPDP49716 269 aaPredicted RBP9.89□□□□□ -0.83
SNX6-209ENST00000557265 GNG3P63215 75 aa9.89□□□□□ -0.83
SNX6-209ENST00000557265 ZNF273Q14593 569 aa9.89□□□□□ -0.83
SNX6-209ENST00000557265 CEACAM21Q3KPI0 293 aa9.89□□□□□ -0.83
SNX6-209ENST00000557265 LDLRAD2Q5SZI1 272 aa9.89□□□□□ -0.83
SNX6-209ENST00000557265 HAGHLQ6PII5 290 aaPredicted RBP9.89□□□□□ -0.83
SNX6-209ENST00000557265 ACP7Q6ZNF0 438 aa9.89□□□□□ -0.83
SNX6-209ENST00000557265 CCDC121Q6ZUS5 278 aa9.89□□□□□ -0.83
SNX6-209ENST00000557265 SHFQ7M4L6 423 aa9.89□□□□□ -0.83
SNX6-209ENST00000557265 ZNF561Q8N587 486 aa9.89□□□□□ -0.83
SNX6-209ENST00000557265 OR2T33Q8NG76 320 aa9.89□□□□□ -0.83
SNX6-209ENST00000557265 FAM81AQ8TBF8 368 aa9.89□□□□□ -0.83
SNX6-209ENST00000557265 AQP3Q92482 292 aa9.89□□□□□ -0.83
SNX6-209ENST00000557265 OTULINQ96BN8 352 aa9.89□□□□□ -0.83
SNX6-209ENST00000557265 FOXRED1Q96CU9 486 aaPredicted RBP9.89□□□□□ -0.83
SNX6-209ENST00000557265 ZNF488Q96MN9 340 aa9.89□□□□□ -0.83
SNX6-209ENST00000557265 OCSTAMPQ9BR26 566 aa9.89□□□□□ -0.83
SNX6-209ENST00000557265 C1orf21Q9H246 121 aa9.89□□□□□ -0.83
SNX6-209ENST00000557265 MED20Q9H944 212 aa9.89□□□□□ -0.83
SNX6-209ENST00000557265 ARMC1Q9NVT9 282 aa9.89□□□□□ -0.83
SNX6-209ENST00000557265 BAIAP2Q9UQB8 552 aa9.89□□□□□ -0.83
SNX6-209ENST00000557265 TBL2Q9Y4P3 447 aaKnown RBP9.89□□□□□ -0.83
SNX6-209ENST00000557265 TCRBV4S1A1TA0A5B7 111 aa9.88□□□□□ -0.83
SNX6-209ENST00000557265 FAM183AA6NL82 134 aa9.88□□□□□ -0.83
SNX6-209ENST00000557265 RIIAD1A6NNX1 92 aa9.88□□□□□ -0.83
SNX6-209ENST00000557265 ODF3BA8MYP8 253 aa9.88□□□□□ -0.83
SNX6-209ENST00000557265 TNFRSF11BO00300 401 aa9.88□□□□□ -0.83
SNX6-209ENST00000557265 SYNGR1O43759 233 aa9.88□□□□□ -0.83
SNX6-209ENST00000557265 SOX14O95416 240 aa9.88□□□□□ -0.83
SNX6-209ENST00000557265 PIPP12273 146 aaPredicted RBP9.88□□□□□ -0.83
SNX6-209ENST00000557265 JUNBP17275 347 aaPredicted RBP9.88□□□□□ -0.83
SNX6-209ENST00000557265 HOXD3P31249 432 aaPredicted RBP9.88□□□□□ -0.83
SNX6-209ENST00000557265 HMGA2P52926 109 aa9.88□□□□□ -0.83
SNX6-209ENST00000557265 SMIM21Q3B7S5 101 aa9.88□□□□□ -0.83
SNX6-209ENST00000557265 TCTEX1D4Q5JR98 221 aa9.88□□□□□ -0.83
SNX6-209ENST00000557265 SAMD4BQ5PRF9 694 aaKnown RBP9.88□□□□□ -0.83
SNX6-209ENST00000557265 ZNF770Q6IQ21 691 aaPredicted RBP9.88□□□□□ -0.83
SNX6-209ENST00000557265 CALHM1Q8IU99 346 aa9.88□□□□□ -0.83
SNX6-209ENST00000557265 OR8B12Q8NGG6 310 aa9.88□□□□□ -0.83
SNX6-209ENST00000557265 OR13D1Q8NGV5 346 aa9.88□□□□□ -0.83
SNX6-209ENST00000557265 RCC1LQ96I51 464 aaKnown RBP9.88□□□□□ -0.83
SNX6-209ENST00000557265 B9D2Q9BPU9 175 aa9.88□□□□□ -0.83
SNX6-209ENST00000557265 VIPAS39Q9H9C1 493 aa9.88□□□□□ -0.83
SNX6-209ENST00000557265 MAGEL2Q9UJ55 1249 aa9.88□□□□□ -0.83
SNX6-209ENST00000557265 LYVE1Q9Y5Y7 322 aa9.88□□□□□ -0.83
SNX6-209ENST00000557265 C17orf98A8MV24 154 aa9.87□□□□□ -0.83
SNX6-209ENST00000557265 F2RL2O00254 374 aa9.87□□□□□ -0.83
SNX6-209ENST00000557265 CCNB2O95067 398 aa9.87□□□□□ -0.83
SNX6-209ENST00000557265 DUS4LO95620 317 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms