RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 GLP1RP43220 463 aa15.4■□□□□ 0.06
SYNE3-202ENST00000553340 KCNMB1Q16558 191 aa15.4■□□□□ 0.06
SYNE3-202ENST00000553340 GUK1Q16774 197 aa15.4■□□□□ 0.06
SYNE3-202ENST00000553340 D2HGDHQ8N465 521 aa15.4■□□□□ 0.06
SYNE3-202ENST00000553340 SLC25A43Q8WUT9 341 aaPredicted RBP15.4■□□□□ 0.06
SYNE3-202ENST00000553340 MRPL24Q96A35 216 aaKnown RBP15.4■□□□□ 0.06
SYNE3-202ENST00000553340 LIN37Q96GY3 246 aaPredicted RBP15.4■□□□□ 0.06
SYNE3-202ENST00000553340 ELL3Q9HB65 397 aaPredicted RBP15.4■□□□□ 0.06
SYNE3-202ENST00000553340 IGKV1D-8A0A087WSZ0 117 aa15.4■□□□□ 0.06
SYNE3-202ENST00000553340 LINC00587B1AMM8 73 aa15.4■□□□□ 0.06
SYNE3-202ENST00000553340 M0R036 132 aa15.4■□□□□ 0.06
SYNE3-202ENST00000553340 RRP8O43159 456 aaKnown RBP15.4■□□□□ 0.06
SYNE3-202ENST00000553340 ZNF616Q08AN1 781 aa15.4■□□□□ 0.06
SYNE3-202ENST00000553340 KRBOX4Q5JUW0 171 aa15.4■□□□□ 0.06
SYNE3-202ENST00000553340 CRIP3Q6Q6R5 217 aa15.4■□□□□ 0.06
SYNE3-202ENST00000553340 Q6ZS52 159 aa15.4■□□□□ 0.06
SYNE3-202ENST00000553340 DEFB119Q8N690 84 aa15.4■□□□□ 0.06
SYNE3-202ENST00000553340 TAAR9Q96RI9 348 aa15.4■□□□□ 0.06
SYNE3-202ENST00000553340 ADAMTS9Q9P2N4 1935 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 BORCS7-ASMTA0A0B4J1R7 106 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 DHRS7CA6NNS2 312 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 NME2P1O60361 137 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 SEC11BP0C7V7 166 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 DANCRP0C864 163 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 MSX1P28360 303 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 PMELP40967 661 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 PLPPR5Q32ZL2 321 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 SLC25A53Q5H9E4 307 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 OGFOD3Q6PK18 319 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 SLC16A14Q7RTX9 510 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 LURAP1LQ8IV03 231 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 CARFQ8N187 725 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 ERGIC1Q969X5 290 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 EIF5A2Q9GZV4 153 aaKnown RBP15.39■□□□□ 0.05
SYNE3-202ENST00000553340 ARV1Q9H2C2 271 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 SPACA1Q9HBV2 294 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 LUZP4Q9P127 313 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 METTL1Q9UBP6 276 aaKnown RBP15.39■□□□□ 0.05
SYNE3-202ENST00000553340 PADI1Q9ULC6 663 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 E5RGE8 158 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 E9PLN8 166 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 LMO7DNF2Z398 122 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 FCGR2AP12318 317 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 FABP9Q0Z7S8 132 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 C6orf201Q7Z4U5 140 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 PLXDC1Q8IUK5 500 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 POC1BQ8TC44 478 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 IP6K3Q96PC2 410 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 NKX2-4Q9H2Z4 354 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 NIT2Q9NQR4 276 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 GSN-AS1Q9NRJ2 163 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 PLEKHJ1Q9NW61 149 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 MCTS1Q9ULC4 181 aaKnown RBP15.39■□□□□ 0.05
SYNE3-202ENST00000553340 NSG2Q9Y328 171 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 EXPH5Q8NEV8 1989 aa15.39■□□□□ 0.05
SYNE3-202ENST00000553340 A0A1W2PNR3 127 aa15.38■□□□□ 0.05
SYNE3-202ENST00000553340 A6NLC8 198 aa15.38■□□□□ 0.05
SYNE3-202ENST00000553340 ZNF726A6NNF4 738 aa15.38■□□□□ 0.05
SYNE3-202ENST00000553340 ZNF43P17038 809 aa15.38■□□□□ 0.05
SYNE3-202ENST00000553340 UCP2P55851 309 aa15.38■□□□□ 0.05
SYNE3-202ENST00000553340 SMAD4Q13485 552 aaKnown RBP15.38■□□□□ 0.05
SYNE3-202ENST00000553340 ISOC2Q96AB3 205 aa15.38■□□□□ 0.05
SYNE3-202ENST00000553340 LYZL4Q96KX0 146 aa15.38■□□□□ 0.05
SYNE3-202ENST00000553340 SEBOXQ9HB31 216 aaPredicted RBP15.38■□□□□ 0.05
SYNE3-202ENST00000553340 DECR2Q9NUI1 292 aa15.38■□□□□ 0.05
SYNE3-202ENST00000553340 KCNIP3Q9Y2W7 256 aa15.38■□□□□ 0.05
SYNE3-202ENST00000553340 FER1L5A0AVI2 2057 aa15.38■□□□□ 0.05
SYNE3-202ENST00000553340 IGHV1OR21-1A0A087WYE8 117 aa15.38■□□□□ 0.05
SYNE3-202ENST00000553340 ACKR3P25106 362 aa15.38■□□□□ 0.05
SYNE3-202ENST00000553340 CTSSP25774 331 aa15.38■□□□□ 0.05
SYNE3-202ENST00000553340 CAMLGP49069 296 aa15.38■□□□□ 0.05
SYNE3-202ENST00000553340 UBE2V2Q15819 145 aa15.38■□□□□ 0.05
SYNE3-202ENST00000553340 STT3BQ8TCJ2 826 aa15.38■□□□□ 0.05
SYNE3-202ENST00000553340 OXGR1Q96P68 337 aa15.38■□□□□ 0.05
SYNE3-202ENST00000553340 ZNF160Q9HCG1 818 aa15.38■□□□□ 0.05
SYNE3-202ENST00000553340 A0A1W2PPE3 182 aa15.37■□□□□ 0.05
SYNE3-202ENST00000553340 A0A1W2PPH5 198 aa15.37■□□□□ 0.05
SYNE3-202ENST00000553340 C5orf63A6NC05 138 aa15.37■□□□□ 0.05
SYNE3-202ENST00000553340 DHRS3O75911 302 aa15.37■□□□□ 0.05
SYNE3-202ENST00000553340 RAB5AP20339 215 aa15.37■□□□□ 0.05
SYNE3-202ENST00000553340 CFHR1Q03591 330 aa15.37■□□□□ 0.05
SYNE3-202ENST00000553340 HIST3H3Q16695 136 aa15.37■□□□□ 0.05
SYNE3-202ENST00000553340 PP6455Q8WZ26 134 aa15.37■□□□□ 0.05
SYNE3-202ENST00000553340 HAS2Q92819 552 aa15.37■□□□□ 0.05
SYNE3-202ENST00000553340 MESP1Q9BRJ9 268 aa15.37■□□□□ 0.05
SYNE3-202ENST00000553340 SCRT1Q9BWW7 348 aa15.37■□□□□ 0.05
SYNE3-202ENST00000553340 ANXA10Q9UJ72 324 aa15.37■□□□□ 0.05
SYNE3-202ENST00000553340 A0A1W2PR77 199 aa15.37■□□□□ 0.05
SYNE3-202ENST00000553340 IGLV3-1P01715 115 aa15.37■□□□□ 0.05
SYNE3-202ENST00000553340 MBPP02686 304 aaPredicted RBP15.37■□□□□ 0.05
SYNE3-202ENST00000553340 GABRR1P24046 479 aa15.37■□□□□ 0.05
SYNE3-202ENST00000553340 ZNF133P52736 654 aaPredicted RBP15.37■□□□□ 0.05
SYNE3-202ENST00000553340 TGIF1Q15583 401 aa15.37■□□□□ 0.05
SYNE3-202ENST00000553340 CLEC9AQ6UXN8 241 aa15.37■□□□□ 0.05
SYNE3-202ENST00000553340 SLC38A9Q8NBW4 561 aa15.37■□□□□ 0.05
SYNE3-202ENST00000553340 NFAM1Q8NET5 270 aaPredicted RBP15.37■□□□□ 0.05
SYNE3-202ENST00000553340 FBXO17Q96EF6 278 aa15.37■□□□□ 0.05
SYNE3-202ENST00000553340 C20orf24Q9BUV8 137 aa15.37■□□□□ 0.05
SYNE3-202ENST00000553340 TPSD1Q9BZJ3 242 aa15.37■□□□□ 0.05
SYNE3-202ENST00000553340 FGF21Q9NSA1 209 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms