RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 PIGFQ07326 219 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 IL10RAQ13651 578 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 SRSF7Q16629 238 aaKnown RBP eCLIP4.55□□□□□ -1.68
UBE4A-203ENST00000545354 ZSWIM7Q19AV6 140 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 MS4A18Q3C1V0 323 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 ATP6AP1LQ52LC2 224 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 EMC4Q5J8M3 183 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 CLEC12AQ5QGZ9 265 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 GLT8D1Q68CQ7 371 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 ASPHD2Q6ICH7 369 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 LAIR2Q6ISS4 152 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 CNIH2Q6PI25 160 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 ARL9Q6T311 187 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 ZNF730Q6ZMV8 503 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.55□□□□□ -1.687e-6■□□□□ 11.2
UBE4A-203ENST00000545354 LRRC55Q6ZSA7 311 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 CLEC14AQ86T13 490 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 TMPRSS11BQ86T26 416 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 CA13Q8N1Q1 262 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 COX18Q8N8Q8 333 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 OR2G3Q8NGZ4 309 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 OCC1Q8TAD7 63 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 HMGCLL1Q8TB92 370 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 VOPP1Q96AW1 172 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 CAPNS2Q96L46 248 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 P2RX4Q99571 388 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 ANAPC13Q9BS18 74 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 SLC25A33Q9BSK2 321 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 FXYD6Q9H0Q3 95 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 ENY2Q9NPA8 101 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 SIX2Q9NPC8 291 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 HINT3Q9NQE9 182 aaKnown RBP4.55□□□□□ -1.68
UBE4A-203ENST00000545354 GPR84Q9NQS5 396 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 RBM22Q9NW64 420 aaKnown RBP eCLIP4.55□□□□□ -1.68
UBE4A-203ENST00000545354 BABAM1Q9NWV8 329 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 KCNIP1Q9NZI2 227 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 TFCP2L1Q9NZI6 479 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 PIPOXQ9P0Z9 390 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 NTMQ9P121 344 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 POLR3KQ9Y2Y1 108 aaPredicted RBP4.55□□□□□ -1.68
UBE4A-203ENST00000545354 SNX11Q9Y5W9 270 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 ENPP4Q9Y6X5 453 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 PLIN4Q96Q06 1357 aa4.55□□□□□ -1.68
UBE4A-203ENST00000545354 TOPAZ1Q8N9V7 1692 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 LAMB4A4D0S4 1761 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 WDR81Q562E7 1941 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 MEIS3P1A6NDR6 274 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 ZNF705FA8MVS1 300 aaPredicted RBP4.54□□□□□ -1.68
UBE4A-203ENST00000545354 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.54□□□□□ -1.68
UBE4A-203ENST00000545354 TNFRSF13BO14836 293 aaPredicted RBP4.54□□□□□ -1.68
UBE4A-203ENST00000545354 DNPH1O43598 174 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 DIRAS1O95057 198 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 EDN1P05305 212 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 ZNF705DP0CH99 300 aaPredicted RBP4.54□□□□□ -1.68
UBE4A-203ENST00000545354 ZNF705BP0CI00 300 aaPredicted RBP4.54□□□□□ -1.68
UBE4A-203ENST00000545354 PGA3P0DJD8 388 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 CD99P14209 185 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 TCN2P20062 427 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 FBLN1P23142 703 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 RPS12P25398 132 aaKnown RBP4.54□□□□□ -1.68
UBE4A-203ENST00000545354 NTSP30990 170 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 ARL2P36404 184 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 OR1D4P47884 311 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 TFPI2P48307 235 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 PAX9P55771 341 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 TIRAPP58753 221 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 TAS2R31P59538 309 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 UBE2NP61088 152 aaKnown RBP4.54□□□□□ -1.68
UBE4A-203ENST00000545354 RPS25P62851 125 aaKnown RBP4.54□□□□□ -1.68
UBE4A-203ENST00000545354 RPS28P62857 69 aaKnown RBP4.54□□□□□ -1.68
UBE4A-203ENST00000545354 MEF2BQ02080 365 aaPredicted RBP4.54□□□□□ -1.68
UBE4A-203ENST00000545354 RUNX3Q13761 415 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 PPM1JQ5JR12 505 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 FAM162BQ5T6X4 162 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 FCRL6Q6DN72 434 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 PWWP2BQ6NUJ5 590 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 TMEM184AQ6ZMB5 413 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 GLDNQ6ZMI3 551 aaPredicted RBP4.54□□□□□ -1.68
UBE4A-203ENST00000545354 ESPNLQ6ZVH7 1005 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 MEPCEQ7L2J0 689 aaKnown RBP4.54□□□□□ -1.68
UBE4A-203ENST00000545354 ZNF440Q8IYI8 595 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 IL22RA1Q8N6P7 574 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 RELL2Q8NC24 303 aaPredicted RBP4.54□□□□□ -1.68
UBE4A-203ENST00000545354 OR1L4Q8NGR5 311 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 C16orf52Q8NHV5 167 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 ST6GALNAC6Q969X2 333 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 PTX4Q96A99 478 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 MUCL1Q96DR8 90 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 ZNF75AQ96N20 296 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 TBL1YQ9BQ87 522 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 ZNF471Q9BX82 626 aaPredicted RBP4.54□□□□□ -1.68
UBE4A-203ENST00000545354 VN1R1Q9GZP7 353 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 GTSF1LQ9H1H1 148 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 KCNJ16Q9NPI9 418 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 PARP11Q9NR21 331 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 OXSMQ9NWU1 459 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 COMMD9Q9P000 198 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 EXO1Q9UQ84 846 aaKnown RBP4.54□□□□□ -1.68
UBE4A-203ENST00000545354 HDGFL3Q9Y3E1 203 aa4.54□□□□□ -1.68
UBE4A-203ENST00000545354 WSB1Q9Y6I7 421 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms