RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 SIGLECL1Q8N7X8 197 aa17.3■□□□□ 0.36
SUDS3-204ENST00000543473 FAM181AQ8N9Y4 354 aa17.3■□□□□ 0.36
SUDS3-204ENST00000543473 UCK1Q9HA47 277 aa17.3■□□□□ 0.36
SUDS3-204ENST00000543473 ZNF331Q9NQX6 463 aaPredicted RBP17.3■□□□□ 0.36
SUDS3-204ENST00000543473 PTPRFP10586 1907 aa17.29■□□□□ 0.36
SUDS3-204ENST00000543473 GSK3AP49840 483 aa17.29■□□□□ 0.36
SUDS3-204ENST00000543473 PMP22Q01453 160 aa17.29■□□□□ 0.36
SUDS3-204ENST00000543473 TLE1Q04724 770 aa17.29■□□□□ 0.36
SUDS3-204ENST00000543473 GUCA2BQ16661 112 aa17.29■□□□□ 0.36
SUDS3-204ENST00000543473 Q5BKY6 102 aa17.29■□□□□ 0.36
SUDS3-204ENST00000543473 CATSPERDQ86XM0 798 aa17.29■□□□□ 0.36
SUDS3-204ENST00000543473 SFTPA1Q8IWL2 248 aa17.29■□□□□ 0.36
SUDS3-204ENST00000543473 UBALD2Q8IYN6 164 aa17.29■□□□□ 0.36
SUDS3-204ENST00000543473 PIK3IP1Q96FE7 263 aa17.29■□□□□ 0.36
SUDS3-204ENST00000543473 REEP6Q96HR9 211 aa17.29■□□□□ 0.36
SUDS3-204ENST00000543473 RPH3ALQ9UNE2 315 aa17.29■□□□□ 0.36
SUDS3-204ENST00000543473 RGPD4Q7Z3J3 1758 aa17.29■□□□□ 0.36
SUDS3-204ENST00000543473 F6UZH7 168 aa17.29■□□□□ 0.36
SUDS3-204ENST00000543473 NTF3P20783 257 aa17.29■□□□□ 0.36
SUDS3-204ENST00000543473 ZNF117Q03924 483 aa17.29■□□□□ 0.36
SUDS3-204ENST00000543473 IQCJQ1A5X6 159 aa17.29■□□□□ 0.36
SUDS3-204ENST00000543473 RAB33BQ9H082 229 aa17.29■□□□□ 0.36
SUDS3-204ENST00000543473 TIMM10BQ9Y5J6 103 aa17.29■□□□□ 0.36
SUDS3-204ENST00000543473 C5orf67F2Z3F1 127 aa17.29■□□□□ 0.36
SUDS3-204ENST00000543473 SPRY1O43609 319 aaPredicted RBP17.29■□□□□ 0.36
SUDS3-204ENST00000543473 MZT1Q08AG7 82 aa17.29■□□□□ 0.36
SUDS3-204ENST00000543473 CBLN3Q6UW01 205 aa17.29■□□□□ 0.36
SUDS3-204ENST00000543473 PUSL1Q8N0Z8 303 aaKnown RBP17.29■□□□□ 0.36
SUDS3-204ENST00000543473 MRGPRX4Q96LA9 322 aa17.29■□□□□ 0.36
SUDS3-204ENST00000543473 ZDHHC11Q9H8X9 412 aa17.29■□□□□ 0.36
SUDS3-204ENST00000543473 PRR13Q9NZ81 148 aa17.29■□□□□ 0.36
SUDS3-204ENST00000543473 PLSCR5A0PG75 271 aa17.29■□□□□ 0.36
SUDS3-204ENST00000543473 FOXF1Q12946 379 aa17.29■□□□□ 0.36
SUDS3-204ENST00000543473 ZNF141Q15928 474 aa17.29■□□□□ 0.36
SUDS3-204ENST00000543473 LINC00518Q8N0U6 118 aa17.29■□□□□ 0.36
SUDS3-204ENST00000543473 MRPS2Q9Y399 296 aaKnown RBP17.29■□□□□ 0.36
SUDS3-204ENST00000543473 FAM103A1Q9BTL3 118 aaKnown RBP17.28■□□□□ 0.36
SUDS3-204ENST00000543473 SPTY2D1-AS1A0A0U1RR47 76 aa17.28■□□□□ 0.36
SUDS3-204ENST00000543473 OR5C1Q8NGR4 320 aa17.28■□□□□ 0.36
SUDS3-204ENST00000543473 PTGFRP43088 359 aa17.28■□□□□ 0.36
SUDS3-204ENST00000543473 CAPZBP47756 277 aa17.28■□□□□ 0.36
SUDS3-204ENST00000543473 SCGB2A2Q13296 93 aa17.28■□□□□ 0.36
SUDS3-204ENST00000543473 FZD2Q14332 565 aa17.28■□□□□ 0.36
SUDS3-204ENST00000543473 TMPRSS7Q7RTY8 843 aa17.28■□□□□ 0.36
SUDS3-204ENST00000543473 MVB12AQ96EY5 273 aa17.28■□□□□ 0.36
SUDS3-204ENST00000543473 EFNB2P52799 333 aa17.27■□□□□ 0.36
SUDS3-204ENST00000543473 FBXL14Q8N1E6 418 aa17.27■□□□□ 0.36
SUDS3-204ENST00000543473 OR2C3Q8N628 320 aa17.27■□□□□ 0.36
SUDS3-204ENST00000543473 SIPA1L1O43166 1804 aa17.27■□□□□ 0.36
SUDS3-204ENST00000543473 GREB1LQ9C091 1923 aaPredicted RBP17.27■□□□□ 0.36
SUDS3-204ENST00000543473 CABIN1Q9Y6J0 2220 aa17.27■□□□□ 0.36
SUDS3-204ENST00000543473 A0A087X0M5 115 aa17.27■□□□□ 0.36
SUDS3-204ENST00000543473 A0A1B0GX30 115 aa17.27■□□□□ 0.36
SUDS3-204ENST00000543473 METTL12A8MUP2 240 aa17.27■□□□□ 0.36
SUDS3-204ENST00000543473 DHHO43323 396 aa17.27■□□□□ 0.36
SUDS3-204ENST00000543473 SULT1A1P50225 295 aa17.27■□□□□ 0.36
SUDS3-204ENST00000543473 CDC20BQ86Y33 519 aa17.27■□□□□ 0.36
SUDS3-204ENST00000543473 MAFAQ8NHW3 353 aaPredicted RBP17.27■□□□□ 0.36
SUDS3-204ENST00000543473 BSCL2Q96G97 398 aaPredicted RBP17.27■□□□□ 0.36
SUDS3-204ENST00000543473 FAM24AA6NFZ4 105 aa17.27■□□□□ 0.36
SUDS3-204ENST00000543473 ARG2P78540 354 aa17.27■□□□□ 0.36
SUDS3-204ENST00000543473 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.27■□□□□ 0.36
SUDS3-204ENST00000543473 ZNF107Q9UII5 783 aaPredicted RBP17.27■□□□□ 0.36
SUDS3-204ENST00000543473 CKAP5Q14008 2032 aa17.27■□□□□ 0.36
SUDS3-204ENST00000543473 MFNGO00587 321 aa17.27■□□□□ 0.35
SUDS3-204ENST00000543473 SLC25A4P12235 298 aa17.27■□□□□ 0.35
SUDS3-204ENST00000543473 HNF1AP20823 631 aa17.27■□□□□ 0.35
SUDS3-204ENST00000543473 OR2B11Q5JQS5 317 aa17.27■□□□□ 0.35
SUDS3-204ENST00000543473 SEC16AO15027 2179 aa17.27■□□□□ 0.35
SUDS3-204ENST00000543473 CDC14BO60729 498 aa17.26■□□□□ 0.35
SUDS3-204ENST00000543473 CD200P41217 278 aa17.26■□□□□ 0.35
SUDS3-204ENST00000543473 ACOT6Q3I5F7 207 aaPredicted RBP17.26■□□□□ 0.35
SUDS3-204ENST00000543473 GPR37O15354 613 aa17.26■□□□□ 0.35
SUDS3-204ENST00000543473 LY86O95711 162 aa17.26■□□□□ 0.35
SUDS3-204ENST00000543473 ICAM2P13598 275 aa17.26■□□□□ 0.35
SUDS3-204ENST00000543473 NHLRC3Q5JS37 347 aa17.26■□□□□ 0.35
SUDS3-204ENST00000543473 CASP8AP2Q9UKL3 1982 aa17.26■□□□□ 0.35
SUDS3-204ENST00000543473 NRG2O14511 850 aaPredicted RBP17.26■□□□□ 0.35
SUDS3-204ENST00000543473 MPZL1O95297 269 aa17.26■□□□□ 0.35
SUDS3-204ENST00000543473 DRD3P35462 400 aa17.26■□□□□ 0.35
SUDS3-204ENST00000543473 GFERP55789 205 aa17.26■□□□□ 0.35
SUDS3-204ENST00000543473 IL13RA2Q14627 380 aa17.26■□□□□ 0.35
SUDS3-204ENST00000543473 C6orf201Q7Z4U5 140 aa17.26■□□□□ 0.35
SUDS3-204ENST00000543473 RP1P56715 2156 aa17.26■□□□□ 0.35
SUDS3-204ENST00000543473 MPPED1O15442 326 aa17.26■□□□□ 0.35
SUDS3-204ENST00000543473 OR3A4PP47883 348 aa17.26■□□□□ 0.35
SUDS3-204ENST00000543473 NOXO1Q8NFA2 376 aa17.26■□□□□ 0.35
SUDS3-204ENST00000543473 RPS4Y2Q8TD47 263 aa17.26■□□□□ 0.35
SUDS3-204ENST00000543473 PINX1Q96BK5 328 aaKnown RBP17.26■□□□□ 0.35
SUDS3-204ENST00000543473 COX14Q96I36 57 aa17.26■□□□□ 0.35
SUDS3-204ENST00000543473 WFDC6Q9BQY6 131 aa17.26■□□□□ 0.35
SUDS3-204ENST00000543473 LIN7CQ9NUP9 197 aaKnown RBP17.26■□□□□ 0.35
SUDS3-204ENST00000543473 CCDC88CQ9P219 2028 aa17.26■□□□□ 0.35
SUDS3-204ENST00000543473 RBFOX3A6NFN3 312 aa17.25■□□□□ 0.35
SUDS3-204ENST00000543473 SCGB2A1O75556 95 aa17.25■□□□□ 0.35
SUDS3-204ENST00000543473 VPS25Q9BRG1 176 aa17.25■□□□□ 0.35
SUDS3-204ENST00000543473 ANKRD10Q9NXR5 420 aa17.25■□□□□ 0.35
SUDS3-204ENST00000543473 CLEC18AA5D8T8 446 aa17.25■□□□□ 0.35
SUDS3-204ENST00000543473 PGA3P0DJD8 388 aa17.25■□□□□ 0.35
SUDS3-204ENST00000543473 SUMO1P63165 101 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms