RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 ASXL3Q9C0F0 2248 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 ZDBF2Q9HCK1 2354 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 SPAG17Q6Q759 2223 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 LOC102723996A0A087X1L8 192 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 IGHV5-10-1A0A0J9YXX1 117 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 C13orf42A0A1B0GVH6 325 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 A0A1W2PQM1 296 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 PMS2P1A4D2B8 440 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 MSGN1A6NI15 193 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 ZNF726A6NNF4 738 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 SERPINE3A8MV23 424 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 PROB1E7EW31 1015 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 NUPL2O15504 423 aaKnown RBP4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 KCNAB3O43448 404 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 SIGLEC6O43699 453 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 TLX3O43711 291 aaPredicted RBP4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 ADAP1O75689 374 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 CRTAPO75718 401 aaPredicted RBP4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 TSPAN9O75954 239 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 ACTL6AO96019 429 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 OPN1LWP04000 364 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 CSTBP04080 98 aaKnown RBP4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 HPNP05981 417 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 HCKP08631 526 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 CD63P08962 238 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 NR2C1P13056 603 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 ZNF43P17038 809 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 AMY2BP19961 511 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 MSR1P21757 451 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 IL32P24001 234 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 PTGFRP43088 359 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 ID4P47928 161 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 NPY4RP50391 375 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 SUCLG1P53597 346 aaKnown RBP4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 GFRA1P56159 465 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 DEFA5Q01523 94 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 ARL6IP1Q15041 203 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 KISS1Q15726 138 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 UBE2V2Q15819 145 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 TMEM176BQ3YBM2 270 aaPredicted RBP4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 CCDC157Q569K6 752 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 PHYHD1Q5SRE7 291 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 CARD17Q5XLA6 110 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 RTL6Q6ICC9 239 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 LCN10Q6JVE6 187 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 IL34Q6ZMJ4 242 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 C1QL2Q7Z5L3 287 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 TMEM123Q8N131 208 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 SPEM1Q8N4L4 309 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 ESX1Q8N693 406 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 ZNF283Q8N7M2 679 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 OR4A4PQ8NGN8 299 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 ADAMTS17Q8TE56 1095 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 RNF141Q8WVD5 230 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 PP6455Q8WZ26 134 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 ROBO4Q8WZ75 1007 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 EMG1Q92979 244 aaKnown RBP4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 NABP1Q96AH0 204 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 C10orf35Q96D05 121 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 C1orf159Q96HA4 380 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 OR10C1Q96KK4 312 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 C2orf50Q96LR7 162 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 CRB3Q9BUF7 120 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 ZNF416Q9BWM5 594 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 PECRQ9BY49 303 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 CHST5Q9GZS9 411 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 SLC5A7Q9GZV3 580 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 GP6Q9HCN6 339 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 ZC4H2Q9NQZ6 224 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 MMP26Q9NRE1 261 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 PCDHB16Q9NRJ7 776 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 ASF1BQ9NVP2 202 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 OR5AC2Q9NZP5 309 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 C19orf25Q9UFG5 118 aaPredicted RBP4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 RARRES3Q9UL19 164 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 KLF2Q9Y5W3 355 aaPredicted RBP4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 USP34Q70CQ2 3546 aa4.55□□□□□ -1.68
ATPAF1-212ENST00000542495 UNC13CQ8NB66 2214 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 ABCA7Q8IZY2 2146 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 ARID1BQ8NFD5 2236 aaPredicted RBP4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 DHRS7CA6NNS2 312 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 K7ESF4 209 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 TAAR5O14804 337 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 DHRS3O75911 302 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 GLRA1P23415 457 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 PTGER4P35408 488 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 ECI1P42126 302 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 DHPSP49366 369 aaPredicted RBP4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 SNU13P55769 128 aaKnown RBP4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 CLDN17P56750 224 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 CCL7P80098 99 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 FLI1Q01543 452 aaPredicted RBP4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 SCRN3Q0VDG4 424 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 PJVKQ0ZLH3 352 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 AIMP2Q13155 320 aaKnown RBP4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 ARFRP1Q13795 201 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 PCOLCEQ15113 449 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 SLC9A3R2Q15599 337 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 GFOD2Q3B7J2 385 aa4.54□□□□□ -1.68
ATPAF1-212ENST00000542495 PLEKHN1Q494U1 663 aaPredicted RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms