RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 OR1N1Q8NGS0 311 aa12.23□□□□□ -0.45
SCNN1A-215ENST00000540037 OIT3Q8WWZ8 545 aa12.23□□□□□ -0.45
SCNN1A-215ENST00000540037 EMG1Q92979 244 aaKnown RBP12.23□□□□□ -0.45
SCNN1A-215ENST00000540037 TOMM40LQ969M1 308 aa12.23□□□□□ -0.45
SCNN1A-215ENST00000540037 JSRP1Q96MG2 331 aaPredicted RBP12.23□□□□□ -0.45
SCNN1A-215ENST00000540037 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.23□□□□□ -0.45
SCNN1A-215ENST00000540037 MEMO1Q9Y316 297 aa12.23□□□□□ -0.45
SCNN1A-215ENST00000540037 ADAMTS9Q9P2N4 1935 aa12.22□□□□□ -0.45
SCNN1A-215ENST00000540037 A0A1W2PNR3 127 aa12.22□□□□□ -0.45
SCNN1A-215ENST00000540037 CAMLGP49069 296 aa12.22□□□□□ -0.45
SCNN1A-215ENST00000540037 NHLH2Q02577 135 aa12.22□□□□□ -0.45
SCNN1A-215ENST00000540037 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.22□□□□□ -0.45
SCNN1A-215ENST00000540037 APCDD1LQ8NCL9 501 aa12.22□□□□□ -0.45
SCNN1A-215ENST00000540037 OR2AJ1Q8NGZ0 328 aa12.22□□□□□ -0.45
SCNN1A-215ENST00000540037 SCGB3A2Q96PL1 93 aa12.22□□□□□ -0.45
SCNN1A-215ENST00000540037 URM1Q9BTM9 101 aaKnown RBP12.22□□□□□ -0.45
SCNN1A-215ENST00000540037 VN1R1Q9GZP7 353 aa12.22□□□□□ -0.45
SCNN1A-215ENST00000540037 FBRSQ9HAH7 460 aa12.22□□□□□ -0.45
SCNN1A-215ENST00000540037 PUS1Q9Y606 427 aaKnown RBP eCLIP12.22□□□□□ -0.45
SCNN1A-215ENST00000540037 CEP290O15078 2479 aa12.22□□□□□ -0.45
SCNN1A-215ENST00000540037 ATXN7O15265 892 aaPredicted RBP12.22□□□□□ -0.45
SCNN1A-215ENST00000540037 PRH1P02810 166 aa12.22□□□□□ -0.45
SCNN1A-215ENST00000540037 CLRN1P58418 232 aa12.22□□□□□ -0.45
SCNN1A-215ENST00000540037 BRICD5Q6PL45 260 aa12.22□□□□□ -0.45
SCNN1A-215ENST00000540037 SULF2Q8IWU5 870 aa12.22□□□□□ -0.45
SCNN1A-215ENST00000540037 ZNF283Q8N7M2 679 aa12.22□□□□□ -0.45
SCNN1A-215ENST00000540037 MFSD8Q8NHS3 518 aa12.22□□□□□ -0.45
SCNN1A-215ENST00000540037 RHBDD1Q8TEB9 315 aa12.22□□□□□ -0.45
SCNN1A-215ENST00000540037 DYRK2Q92630 601 aa12.22□□□□□ -0.45
SCNN1A-215ENST00000540037 PIGTQ969N2 578 aa12.22□□□□□ -0.45
SCNN1A-215ENST00000540037 TAAR9Q96RI9 348 aa12.22□□□□□ -0.45
SCNN1A-215ENST00000540037 WDR77Q9BQA1 342 aaPredicted RBP12.22□□□□□ -0.45
SCNN1A-215ENST00000540037 MRPL13Q9BYD1 178 aaKnown RBP12.22□□□□□ -0.45
SCNN1A-215ENST00000540037 ZDHHC8Q9ULC8 765 aa12.22□□□□□ -0.45
SCNN1A-215ENST00000540037 MMACHCQ9Y4U1 282 aa12.22□□□□□ -0.45
SCNN1A-215ENST00000540037 MMP24Q9Y5R2 645 aa12.22□□□□□ -0.45
SCNN1A-215ENST00000540037 BRWD1Q9NSI6 2320 aa12.22□□□□□ -0.45
SCNN1A-215ENST00000540037 FREM2Q5SZK8 3169 aa12.22□□□□□ -0.45
SCNN1A-215ENST00000540037 EPOPA6NHQ4 379 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 ZNF727A8MUV8 499 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 ITGA3P26006 1051 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 EIF2S3P41091 472 aaKnown RBP12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 DCAF7P61962 342 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 FAM3AP98173 230 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 ZP4Q12836 540 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 PLXDC2Q6UX71 529 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 LYZL2Q7Z4W2 148 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 ZNF565Q8N9K5 539 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 LMX1AQ8TE12 382 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 LYZL4Q96KX0 146 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 FAM212BQ9NTI7 297 aaPredicted RBP12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 PIAS3Q9Y6X2 628 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 SHANK1Q9Y566 2161 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 LIPT2A6NK58 231 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 IFITM10A6NMD0 228 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 AP4M1O00189 453 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 GPR37O15354 613 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 DANCRP0C864 163 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 FAHP16930 419 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 S100PP25815 95 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 OPRM1P35372 400 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 CEBPGP53567 150 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 TAS2R46P59540 309 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 GABREP78334 506 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 UBE2V2Q15819 145 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 DEFB133Q30KQ1 61 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 RPUSD3Q6P087 351 aaKnown RBP12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 ZNF600Q6ZNG1 722 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 ZNF441Q8N8Z8 693 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 UBAC2Q8NBM4 344 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 NAXEQ8NCW5 288 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 OR1L3Q8NH93 324 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 GGACTQ9BVM4 153 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 PNRC2Q9NPJ4 139 aaKnown RBP12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 RALGAPA1Q6GYQ0 2036 aa12.21□□□□□ -0.45
SCNN1A-215ENST00000540037 FOXI3A8MTJ6 420 aaPredicted RBP12.21□□□□□ -0.46
SCNN1A-215ENST00000540037 H3BMH7 237 aa12.21□□□□□ -0.46
SCNN1A-215ENST00000540037 GAPDHP04406 335 aaKnown RBP12.21□□□□□ -0.46
SCNN1A-215ENST00000540037 CSNK1EP49674 416 aaKnown RBP12.21□□□□□ -0.46
SCNN1A-215ENST00000540037 MYBPHQ13203 477 aa12.21□□□□□ -0.46
SCNN1A-215ENST00000540037 CLINT1Q14677 625 aa12.21□□□□□ -0.46
SCNN1A-215ENST00000540037 OPN5Q6U736 354 aa12.21□□□□□ -0.46
SCNN1A-215ENST00000540037 FAM89BQ8N5H3 189 aa12.21□□□□□ -0.46
SCNN1A-215ENST00000540037 OR52M1Q8NGK5 317 aa12.21□□□□□ -0.46
SCNN1A-215ENST00000540037 SSC4DQ8WTU2 575 aa12.21□□□□□ -0.46
SCNN1A-215ENST00000540037 ABHD14AQ9BUJ0 271 aa12.21□□□□□ -0.46
SCNN1A-215ENST00000540037 PAPOLGQ9BWT3 736 aaKnown RBP12.21□□□□□ -0.46
SCNN1A-215ENST00000540037 C19orf12Q9NSK7 152 aa12.21□□□□□ -0.46
SCNN1A-215ENST00000540037 TUBD1Q9UJT1 453 aa12.21□□□□□ -0.46
SCNN1A-215ENST00000540037 POMT1Q9Y6A1 747 aa12.21□□□□□ -0.46
SCNN1A-215ENST00000540037 FAM221AA4D161 298 aa12.2□□□□□ -0.46
SCNN1A-215ENST00000540037 LY86O95711 162 aa12.2□□□□□ -0.46
SCNN1A-215ENST00000540037 RPS23P62266 143 aaKnown RBP12.2□□□□□ -0.46
SCNN1A-215ENST00000540037 CCL20P78556 96 aa12.2□□□□□ -0.46
SCNN1A-215ENST00000540037 DLX2Q07687 328 aaPredicted RBP12.2□□□□□ -0.46
SCNN1A-215ENST00000540037 SGPP2Q8IWX5 399 aa12.2□□□□□ -0.46
SCNN1A-215ENST00000540037 C20orf196Q8IYI0 205 aa12.2□□□□□ -0.46
SCNN1A-215ENST00000540037 OR5AC1P0C628 307 aa12.2□□□□□ -0.46
SCNN1A-215ENST00000540037 FCGR2AP12318 317 aa12.2□□□□□ -0.46
SCNN1A-215ENST00000540037 MYF5P13349 255 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms