RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 FABP1P07148 127 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 ZNF883P0CG24 379 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 TBPP20226 339 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 RAB4AP20338 218 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 SLC2A5P22732 501 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 SERPINB8P50452 374 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 PDLIM4P50479 330 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 HCCSP53701 268 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 DVL1P1P54792 670 aaPredicted RBP4.84□□□□□ -1.63
MRE11-209ENST00000540013 PAFAH1B2P68402 229 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 RPL36AP83881 106 aaKnown RBP4.84□□□□□ -1.63
MRE11-209ENST00000540013 HMGCS1Q01581 520 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 PRKCDQ05655 676 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 RAB31Q13636 194 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 POU2AF1Q16633 256 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 PDZD11Q5EBL8 140 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 RWDD4Q6NW29 188 aaKnown RBP4.84□□□□□ -1.63
MRE11-209ENST00000540013 Q6ZT83 130 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 FAM19A1Q7Z5A9 133 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 CA13Q8N1Q1 262 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 OR5AP2Q8NGF4 316 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 OR5L1Q8NGL2 311 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 OR2T6Q8NHC8 308 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 DYNC2LI1Q8TCX1 351 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 MAPK15Q8TD08 544 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 DOK4Q8TEW6 326 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 OR5P2Q8WZ92 322 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 ADTRPQ96IZ2 230 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 MS4A14Q96JA4 679 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 CCDC42Q96M95 316 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 NOL4LQ96MY1 436 aaPredicted RBP4.84□□□□□ -1.63
MRE11-209ENST00000540013 TSNAXQ99598 290 aaKnown RBP4.84□□□□□ -1.63
MRE11-209ENST00000540013 HES7Q9BYE0 225 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 KRTAP1-5Q9BYS1 174 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 IL1RAPQ9NPH3 570 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 FGFR1OP2Q9NVK5 253 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 THYN1Q9P016 225 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 Q9UF83 564 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 GNPTGQ9UJJ9 305 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 SNX10Q9Y5X0 201 aa4.84□□□□□ -1.63
MRE11-209ENST00000540013 KIF26BQ2KJY2 2108 aa4.84□□□□□ -1.64
MRE11-209ENST00000540013 DOCK7Q96N67 2140 aa4.84□□□□□ -1.64
MRE11-209ENST00000540013 CFAP47Q6ZTR5 3102 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 IGHV3-20A0A0C4DH32 117 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 LOC105371267A0A1B0GV96 52 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 E9PAM4 449 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 H0YJX3 145 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 DFFAO00273 331 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 MAGEB4O15481 346 aaPredicted RBP4.83□□□□□ -1.64
MRE11-209ENST00000540013 ENSAO43768 121 aaKnown RBP4.83□□□□□ -1.64
MRE11-209ENST00000540013 SNAP91O60641 907 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 FKBP6O75344 327 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 RAB36O95755 333 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 CALB1P05937 261 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 IGHV4-34P06331 123 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 SNRPCP09234 159 aaKnown RBP4.83□□□□□ -1.64
MRE11-209ENST00000540013 GNRHRP30968 328 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 SDC4P31431 198 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 DRD3P35462 400 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 ERVK-16P61578 105 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 MRPS11P82912 194 aaKnown RBP4.83□□□□□ -1.64
MRE11-209ENST00000540013 BCL2L1Q07817 233 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 ST3GAL4Q11206 333 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 CDC20Q12834 499 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 ECH1Q13011 328 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 PDIA2Q13087 525 aaKnown RBP4.83□□□□□ -1.64
MRE11-209ENST00000540013 TFDP2Q14188 446 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 RFX4Q33E94 735 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 ZBED5Q49AG3 693 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 OGFRL1Q5TC84 451 aaPredicted RBP4.83□□□□□ -1.64
MRE11-209ENST00000540013 FAM219BQ5XKK7 198 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 LACC1Q8IV20 430 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 NAXDQ8IW45 347 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 C10orf67Q8IYJ2 551 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 STPG2Q8N412 459 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 DCAF4L2Q8NA75 395 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 SFXN5Q8TD22 340 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 RXFP2Q8WXD0 754 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 SNF8Q96H20 258 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 ZNF681Q96N22 645 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 PRAP1Q96NZ9 151 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 IL17FQ96PD4 163 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 PSMB7Q99436 277 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 GPR21Q99679 349 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 KLHDC3Q9BQ90 382 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 BARHL1Q9BZE3 327 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 LIME1Q9H400 295 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 DHX35Q9H5Z1 703 aaKnown RBP4.83□□□□□ -1.64
MRE11-209ENST00000540013 SLC2A6Q9UGQ3 507 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 MLXQ9UH92 298 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 HS3ST2Q9Y278 367 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 OR51B4Q9Y5P0 310 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 MRPS18BQ9Y676 258 aaKnown RBP4.83□□□□□ -1.64
MRE11-209ENST00000540013 KMT2BQ9UMN6 2715 aaPredicted RBP4.83□□□□□ -1.64
MRE11-209ENST00000540013 COL5A1P20908 1838 aaPredicted RBP4.83□□□□□ -1.64
MRE11-209ENST00000540013 DMXL2Q8TDJ6 3036 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 AHCTF1Q8WYP5 2266 aa4.83□□□□□ -1.64
MRE11-209ENST00000540013 AKAP13Q12802 2813 aa4.82□□□□□ -1.64
MRE11-209ENST00000540013 ZFC3H1O60293 1989 aaKnown RBP4.82□□□□□ -1.64
MRE11-209ENST00000540013 PKD1L2Q7Z442 2459 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms