RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 RRAGDQ9NQL2 400 aaPredicted RBP2.93□□□□□ -1.94
YBX3-205ENST00000536107 C19orf12Q9NSK7 152 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 SLC2A8Q9NY64 477 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 MRPL39Q9NYK5 338 aaKnown RBP2.93□□□□□ -1.94
YBX3-205ENST00000536107 USE1Q9NZ43 259 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 P2RX2Q9UBL9 471 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 APLNQ9ULZ1 77 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 VSIG4Q9Y279 399 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 FBXO7Q9Y3I1 522 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 MINOS1-NBL1R4GNA1 71 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 VPS13BQ7Z7G8 4022 aa2.93□□□□□ -1.94
YBX3-205ENST00000536107 ODF3BA8MYP8 253 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 HMGB1P1B2RPK0 211 aaPredicted RBP2.92□□□□□ -1.94
YBX3-205ENST00000536107 LRRN3E7EW58 273 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 LINC01619G3V211 115 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.92□□□□□ -1.94
YBX3-205ENST00000536107 SGCEO43556 437 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 RRP9O43818 475 aaKnown RBP2.92□□□□□ -1.94
YBX3-205ENST00000536107 TBX19O60806 448 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 SCGB1D2O95969 90 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 IGLV1-51P01701 117 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 SMR3BP02814 79 aaPredicted RBP2.92□□□□□ -1.94
YBX3-205ENST00000536107 HIST1H2ABP04908 130 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 C2P06681 752 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 ENO1P06733 434 aaKnown RBP2.92□□□□□ -1.94
YBX3-205ENST00000536107 GUSBP08236 651 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 GSTA1P08263 222 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 RPS17P08708 135 aaKnown RBP2.92□□□□□ -1.94
YBX3-205ENST00000536107 GSTA2P09210 222 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 P0DMU3 169 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 FAM231AP0DMU4 169 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 FAM231CP0DMU5 169 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 IGHV1-8P0DP01 117 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 NR2F1P10589 423 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 LAMP1P11279 417 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 PRG2P13727 222 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 VDAC1P21796 283 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 HTR1DP28221 377 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 BMI1P35226 326 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 RPL3P39023 403 aaKnown RBP2.92□□□□□ -1.94
YBX3-205ENST00000536107 GPR12P47775 334 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 CENPAP49450 140 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 CAV3P56539 151 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 ARL4CP56559 192 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 ADARB1P78563 741 aaKnown RBP2.92□□□□□ -1.94
YBX3-205ENST00000536107 HOXC5Q00444 222 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 CD47Q08722 323 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 SCRN3Q0VDG4 424 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 HNF4GQ14541 408 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 LIN52Q52LA3 116 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 FAM27BQ5VT28 67 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 STUMQ69YW2 141 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 OR4F3Q6IEY1 312 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 SPSB3Q6PJ21 355 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 PGAP1Q75T13 922 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 HIST3H2AQ7L7L0 130 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 MRPL21Q7Z2W9 205 aaKnown RBP2.92□□□□□ -1.94
YBX3-205ENST00000536107 SERPINA11Q86U17 422 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 UBE2DNLQ8IWF7 75 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 LYPD1Q8N2G4 141 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 NOXO1Q8NFA2 376 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 OR8S1Q8NH09 359 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 OR5J2Q8NH18 312 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 OR52P1PQ8NH57 321 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 C11orf45Q8TAV5 145 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 UBALD1Q8TB05 177 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 HIST1H2ACQ93077 130 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 APOBEC3DQ96AK3 386 aaPredicted RBP2.92□□□□□ -1.94
YBX3-205ENST00000536107 SLCO4A1Q96BD0 722 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 C12orf43Q96C57 262 aaKnown RBP2.92□□□□□ -1.94
YBX3-205ENST00000536107 MTERF3Q96E29 417 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 SLC41A3Q96GZ6 507 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 GAFA1Q96PS6 74 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 WFDC6Q9BQY6 131 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 NEURL2Q9BR09 285 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 C1orf21Q9H246 121 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 TXNIPQ9H3M7 391 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 ARMC7Q9H6L4 198 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 ZNF355PQ9NSJ1 428 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 TBC1D23Q9NUY8 699 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 HAO2Q9NYQ3 351 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 ZNF225Q9UK10 706 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 PRDM4Q9UKN5 801 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 WSB1Q9Y6I7 421 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 COMMD3-BMI1R4GMX3 469 aa2.92□□□□□ -1.94
YBX3-205ENST00000536107 A0A0G2JLM5 398 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 A0A1W2PRG6 482 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 GMNCA6NCL1 334 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 GGT3PA6NGU5 568 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 NCBP2LA6PVI3 153 aaKnown RBP2.91□□□□□ -1.94
YBX3-205ENST00000536107 OR11H12B2RN74 326 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 RRHO14718 337 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 SLC22A2O15244 555 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 SIGLEC5O15389 551 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 GMDSO60547 372 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 RGS11O94810 467 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 SERPINA1P01009 418 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 BGLAPP02818 100 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 COX5BP10606 129 aa2.91□□□□□ -1.94
YBX3-205ENST00000536107 KITP10721 976 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms