RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 NCR3LG1Q68D85 454 aa13.78□□□□□ -0.2
CPSF1-207ENST00000531727 COMMD2Q86X83 199 aa13.78□□□□□ -0.2
CPSF1-207ENST00000531727 OR5A2Q8NGI9 324 aa13.78□□□□□ -0.2
CPSF1-207ENST00000531727 ZNF671Q8TAW3 534 aa13.78□□□□□ -0.2
CPSF1-207ENST00000531727 OR8B4Q96RC9 309 aa13.78□□□□□ -0.2
CPSF1-207ENST00000531727 METTL8Q9H825 291 aaKnown RBP13.78□□□□□ -0.2
CPSF1-207ENST00000531727 PAPOLBQ9NRJ5 636 aaKnown RBP13.78□□□□□ -0.2
CPSF1-207ENST00000531727 ZNF222Q9UK12 451 aa13.78□□□□□ -0.2
CPSF1-207ENST00000531727 TMEM14AQ9Y6G1 99 aa13.78□□□□□ -0.2
CPSF1-207ENST00000531727 MEIOCA2RUB1 952 aa13.77□□□□□ -0.21
CPSF1-207ENST00000531727 OR5B21A6NL26 309 aa13.77□□□□□ -0.21
CPSF1-207ENST00000531727 PRR32B1ATL7 298 aa13.77□□□□□ -0.21
CPSF1-207ENST00000531727 GYG2O15488 501 aa13.77□□□□□ -0.21
CPSF1-207ENST00000531727 PAHP00439 452 aa13.77□□□□□ -0.21
CPSF1-207ENST00000531727 CRISP1P54107 249 aa13.77□□□□□ -0.21
CPSF1-207ENST00000531727 ACSM1Q08AH1 577 aa13.77□□□□□ -0.21
CPSF1-207ENST00000531727 RIPPLY1Q0D2K3 151 aa13.77□□□□□ -0.21
CPSF1-207ENST00000531727 BLMHQ13867 455 aa13.77□□□□□ -0.21
CPSF1-207ENST00000531727 ZNF829Q3KNS6 432 aaPredicted RBP13.77□□□□□ -0.21
CPSF1-207ENST00000531727 PDLIM3Q53GG5 364 aaPredicted RBP13.77□□□□□ -0.21
CPSF1-207ENST00000531727 ZBTB37Q5TC79 503 aa13.77□□□□□ -0.21
CPSF1-207ENST00000531727 DHRS7BQ6IAN0 325 aaPredicted RBP13.77□□□□□ -0.21
CPSF1-207ENST00000531727 Q6ZSV7 163 aa13.77□□□□□ -0.21
CPSF1-207ENST00000531727 THAP5Q7Z6K1 395 aa13.77□□□□□ -0.21
CPSF1-207ENST00000531727 ZNF679Q8IYX0 411 aa13.77□□□□□ -0.21
CPSF1-207ENST00000531727 PNKDQ8N490 385 aa13.77□□□□□ -0.21
CPSF1-207ENST00000531727 OR51E1Q8TCB6 317 aa13.77□□□□□ -0.21
CPSF1-207ENST00000531727 ASB17Q8WXJ9 295 aa13.77□□□□□ -0.21
CPSF1-207ENST00000531727 AQP3Q92482 292 aa13.77□□□□□ -0.21
CPSF1-207ENST00000531727 NRBF2Q96F24 287 aa13.77□□□□□ -0.21
CPSF1-207ENST00000531727 DUS3LQ96G46 650 aaKnown RBP13.77□□□□□ -0.21
CPSF1-207ENST00000531727 C16orf95Q9H693 158 aa13.77□□□□□ -0.21
CPSF1-207ENST00000531727 ELL3Q9HB65 397 aaPredicted RBP13.77□□□□□ -0.21
CPSF1-207ENST00000531727 GPR84Q9NQS5 396 aa13.77□□□□□ -0.21
CPSF1-207ENST00000531727 NUFIP1Q9UHK0 495 aaKnown RBP13.77□□□□□ -0.21
CPSF1-207ENST00000531727 COPS3Q9UNS2 423 aa13.77□□□□□ -0.21
CPSF1-207ENST00000531727 TRBV23-1A0A0A0MS06 115 aa13.76□□□□□ -0.21
CPSF1-207ENST00000531727 GSC2O15499 205 aa13.76□□□□□ -0.21
CPSF1-207ENST00000531727 FAHP16930 419 aa13.76□□□□□ -0.21
CPSF1-207ENST00000531727 RIDAP52758 137 aaKnown RBP13.76□□□□□ -0.21
CPSF1-207ENST00000531727 MIDNQ504T8 468 aa13.76□□□□□ -0.21
CPSF1-207ENST00000531727 DMRTC1Q5HYR2 192 aa13.76□□□□□ -0.21
CPSF1-207ENST00000531727 PLCXD3Q63HM9 321 aa13.76□□□□□ -0.21
CPSF1-207ENST00000531727 ASPHD2Q6ICH7 369 aa13.76□□□□□ -0.21
CPSF1-207ENST00000531727 FAHD1Q6P587 224 aa13.76□□□□□ -0.21
CPSF1-207ENST00000531727 MOB3CQ70IA8 216 aa13.76□□□□□ -0.21
CPSF1-207ENST00000531727 ZNRF1Q8ND25 227 aa13.76□□□□□ -0.21
CPSF1-207ENST00000531727 TMEM185AQ8NFB2 350 aa13.76□□□□□ -0.21
CPSF1-207ENST00000531727 OR5R1Q8NH85 324 aa13.76□□□□□ -0.21
CPSF1-207ENST00000531727 SDSLQ96GA7 329 aa13.76□□□□□ -0.21
CPSF1-207ENST00000531727 TTTY10Q9BZA0 68 aa13.76□□□□□ -0.21
CPSF1-207ENST00000531727 MMP27Q9H306 513 aa13.76□□□□□ -0.21
CPSF1-207ENST00000531727 RASL12Q9NYN1 266 aa13.76□□□□□ -0.21
CPSF1-207ENST00000531727 ENPP5Q9UJA9 477 aa13.76□□□□□ -0.21
CPSF1-207ENST00000531727 IKZF2Q9UKS7 526 aa13.76□□□□□ -0.21
CPSF1-207ENST00000531727 POMPQ9Y244 141 aa13.76□□□□□ -0.21
CPSF1-207ENST00000531727 PIGLQ9Y2B2 252 aa13.76□□□□□ -0.21
CPSF1-207ENST00000531727 MAB21L2Q9Y586 359 aa13.76□□□□□ -0.21
CPSF1-207ENST00000531727 PRKYO43930 277 aa13.75□□□□□ -0.21
CPSF1-207ENST00000531727 DHRS3O75911 302 aa13.75□□□□□ -0.21
CPSF1-207ENST00000531727 TSPAN9O75954 239 aa13.75□□□□□ -0.21
CPSF1-207ENST00000531727 TGFBR2P37173 567 aa13.75□□□□□ -0.21
CPSF1-207ENST00000531727 DAPP51397 102 aa13.75□□□□□ -0.21
CPSF1-207ENST00000531727 MFGE8Q08431 387 aaPredicted RBP13.75□□□□□ -0.21
CPSF1-207ENST00000531727 PTGES3Q15185 160 aaKnown RBP13.75□□□□□ -0.21
CPSF1-207ENST00000531727 ZNF684Q5T5D7 378 aa13.75□□□□□ -0.21
CPSF1-207ENST00000531727 HAGHLQ6PII5 290 aaPredicted RBP13.75□□□□□ -0.21
CPSF1-207ENST00000531727 ACP7Q6ZNF0 438 aa13.75□□□□□ -0.21
CPSF1-207ENST00000531727 PPP1R14AQ96A00 147 aa13.75□□□□□ -0.21
CPSF1-207ENST00000531727 SLC7A6OSQ96CW6 309 aaPredicted RBP13.75□□□□□ -0.21
CPSF1-207ENST00000531727 CNN2Q99439 309 aaKnown RBP13.75□□□□□ -0.21
CPSF1-207ENST00000531727 RBM4BQ9BQ04 359 aaKnown RBP13.75□□□□□ -0.21
CPSF1-207ENST00000531727 PRRG3Q9BZD7 231 aa13.75□□□□□ -0.21
CPSF1-207ENST00000531727 TCF7L1Q9HCS4 588 aa13.75□□□□□ -0.21
CPSF1-207ENST00000531727 H0YAE9 185 aa13.74□□□□□ -0.21
CPSF1-207ENST00000531727 SRSF10O75494 262 aaKnown RBP13.74□□□□□ -0.21
CPSF1-207ENST00000531727 MTRF1O75570 445 aaKnown RBP13.74□□□□□ -0.21
CPSF1-207ENST00000531727 NRASP01111 189 aa13.74□□□□□ -0.21
CPSF1-207ENST00000531727 TTRP02766 147 aa13.74□□□□□ -0.21
CPSF1-207ENST00000531727 ESRRGP62508 458 aa13.74□□□□□ -0.21
CPSF1-207ENST00000531727 SMIM21Q3B7S5 101 aa13.74□□□□□ -0.21
CPSF1-207ENST00000531727 HCP5Q6MZN7 132 aa13.74□□□□□ -0.21
CPSF1-207ENST00000531727 FAM185AQ8N0U4 392 aa13.74□□□□□ -0.21
CPSF1-207ENST00000531727 POC1AQ8NBT0 407 aa13.74□□□□□ -0.21
CPSF1-207ENST00000531727 BEND2Q8NDZ0 799 aa13.74□□□□□ -0.21
CPSF1-207ENST00000531727 OR5D13Q8NGL4 314 aa13.74□□□□□ -0.21
CPSF1-207ENST00000531727 UTP4Q969X6 686 aaKnown RBP13.74□□□□□ -0.21
CPSF1-207ENST00000531727 MOB1AQ9H8S9 216 aa13.74□□□□□ -0.21
CPSF1-207ENST00000531727 LOC110117498-PIK3R3F6TDL0 507 aa13.73□□□□□ -0.21
CPSF1-207ENST00000531727 DNAJC8O75937 253 aaPredicted RBP13.73□□□□□ -0.21
CPSF1-207ENST00000531727 CAPZA1P52907 286 aa13.73□□□□□ -0.21
CPSF1-207ENST00000531727 CLVS2Q5SYC1 327 aa13.73□□□□□ -0.21
CPSF1-207ENST00000531727 TMEM42Q69YG0 159 aa13.73□□□□□ -0.21
CPSF1-207ENST00000531727 ZNF322Q6U7Q0 402 aaPredicted RBP13.73□□□□□ -0.21
CPSF1-207ENST00000531727 MEPCEQ7L2J0 689 aaKnown RBP13.73□□□□□ -0.21
CPSF1-207ENST00000531727 BCDIN3DQ7Z5W3 292 aaKnown RBP13.73□□□□□ -0.21
CPSF1-207ENST00000531727 CD177Q8N6Q3 437 aa13.73□□□□□ -0.21
CPSF1-207ENST00000531727 OR5K1Q8NHB7 308 aa13.73□□□□□ -0.21
CPSF1-207ENST00000531727 UBE2FQ969M7 185 aa13.73□□□□□ -0.21
CPSF1-207ENST00000531727 ZNF488Q96MN9 340 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms