RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 OR4A47Q6IF82 309 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 SLC27A1Q6PCB7 646 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 ZNF613Q6PF04 617 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 ENPP6Q6UWR7 440 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 CXCL17Q6UXB2 119 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 HEPN1Q6WQI6 88 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 ZNF705AQ6ZN79 300 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 ZCCHC23Q6ZST2 131 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 ADCK2Q7Z695 626 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 DEFB128Q7Z7B8 93 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 ZNF546Q86UE3 836 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 NIT1Q86X76 327 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 ZDHHC21Q8IVQ6 265 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 RIMKLAQ8IXN7 391 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 TMEM183AQ8IXX5 376 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 LGI3Q8N145 548 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 MUC20Q8N307 709 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 GTPBP8Q8N3Z3 284 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 OR2AK2Q8NG84 335 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 OR4K5Q8NGD3 323 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 OR5A2Q8NGI9 324 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 OR1S2Q8NGQ3 325 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 GNPDA2Q8TDQ7 276 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 LRRC15Q8TF66 581 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 SORCS1Q8WY21 1168 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 SUSD6Q92537 303 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 PNPLA2Q96AD5 504 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 MOB3AQ96BX8 217 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 MRAP2Q96G30 205 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 ITCHQ96J02 903 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 TEX37Q96LM6 180 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 KCTD7Q96MP8 289 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 GUCD1Q96NT3 240 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 SRSF8Q9BRL6 282 aaKnown RBP4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 TIMM29Q9BSF4 260 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 SYT11Q9BT88 431 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 RAB11FIP5Q9BXF6 653 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 CDCA4Q9BXL8 241 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 C20orf27Q9GZN8 174 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 RAB6CQ9H0N0 254 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 ZBP1Q9H171 429 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 TLNRD1Q9H1K6 362 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 SRMSQ9H3Y6 488 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 EXOSC4Q9NPD3 245 aaKnown RBP4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 ACP6Q9NPH0 428 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 NOX4Q9NPH5 578 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 OR2S2Q9NQN1 319 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 EXOSC3Q9NQT5 275 aaKnown RBP4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 TMEM161AQ9NX61 479 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 RPS6KB2Q9UBS0 482 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 PSORS1C1Q9UIG5 152 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 VAX2Q9UIW0 290 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 IKZF2Q9UKS7 526 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 RAB22AQ9UL26 194 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 NEU3Q9UQ49 428 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 FARSAQ9Y285 508 aaKnown RBP4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 TIMM10BQ9Y5J6 103 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 SCN5AQ14524 2016 aa4.03□□□□□ -1.76
HMGB3P13-201ENST00000511263 RLFQ13129 1914 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 LOC105371242A0A075B767 164 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 A0A087WWC5 75 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 IGHV2OR16-5A0A0B4J2B6 119 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 LOC285095A0A1B0GVY8 99 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 LILRA5A6NI73 299 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 VSTM2BA6NLU5 285 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 DHRS7CA6NNS2 312 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 ZNF705GA8MUZ8 300 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 G3V2L1 256 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 RNASEK-C17orf49H0YIS7 233 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 J3QR89 54 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 MANBAO00462 879 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 NME4O00746 187 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 RBFOX2O43251 390 aaKnown RBP eCLIP4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 FGF16O43320 207 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 MFSD11O43934 449 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 PAGE4O60829 102 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 NME6O75414 186 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 OR6A2O95222 327 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 LRATO95237 230 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 FARS2O95363 451 aaKnown RBP4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 CST1P01037 141 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 AMBPP02760 352 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 CXCL10P02778 98 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 RLN1P04808 185 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 CSN2P05814 226 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 SFTPBP07988 381 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 PIPP12273 146 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 TPT1P13693 172 aaKnown RBP4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 AREGP15514 252 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 CXCL3P19876 107 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 SAT1P21673 171 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 CD1CP29017 333 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 SOAT1P35610 550 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 ELK3P41970 407 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 RPS10P46783 165 aaKnown RBP4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 LGALS7P47929 136 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 MARCKSL1P49006 195 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 STK19P49842 368 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 CAV2P51636 162 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms