RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 MS4A2Q01362 244 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 PRDX1Q06830 199 aaKnown RBP2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 INCA1Q0VD86 236 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 PMVKQ15126 192 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 CLEC12BQ2HXU8 276 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 GSG1Q2KHT4 349 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 CHRFAM7AQ494W8 412 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 CLEC12AQ5QGZ9 265 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 PLET1Q6UQ28 207 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 FAM231DQ6ZW35 169 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 STRADAQ7RTN6 431 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 SLC51BQ86UW2 128 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 COMMD7Q86VX2 200 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 CALHM1Q8IU99 346 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 ITPRIPQ8IWB1 547 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 CPNE9Q8IYJ1 553 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 STK40Q8N2I9 435 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 ACBD4Q8NC06 268 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 NTN5Q8WTR8 489 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 FAM222BQ8WU58 562 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 FAM172AQ8WUF8 416 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 DCPSQ96C86 337 aaKnown RBP2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 ZNF501Q96CX3 271 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 AURKBQ96GD4 344 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 LYZL4Q96KX0 146 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 QKIQ96PU8 341 aaKnown RBP eCLIP2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 SMIM14Q96QK8 99 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 TEAD3Q99594 435 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 DOK1Q99704 481 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 LRRC61Q9BV99 259 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 FGFBP2Q9BYJ0 223 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 SLC25A31Q9H0C2 315 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 SPNS1Q9H2V7 528 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 MS4A6AQ9H2W1 248 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 TPK1Q9H3S4 243 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 FBXL15Q9H469 300 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 ZDHHC11Q9H8X9 412 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 RNF7Q9UBF6 113 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 VAX2Q9UIW0 290 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 ZNF257Q9Y2Q1 563 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 MOB4Q9Y3A3 225 aa2.8□□□□□ -1.96
HMGB1P22-201ENST00000505315 IGHV1-69DA0A0B4J2H0 117 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 A0A1B0GUV1 79 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 TMEM238C9JI98 176 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 SLC31A2O15432 143 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 REM1O75628 298 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 GABARAPO95166 117 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 MOSP00540 346 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 IGKV1D-16P01601 117 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 IGHV3-48P01763 117 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 SEMG1P04279 462 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 CHTF8P0CG12 524 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 HIST1H1EP10412 219 aaKnown RBP2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 UCHL3P15374 230 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 CFL1P23528 166 aaKnown RBP2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 PMELP40967 661 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 ERVS71-1P61550 626 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 TIMM10P62072 90 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 LY6DQ14210 128 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 RBMY1FQ15415 496 aaKnown RBP2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 PRR4Q16378 134 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 MAPK14Q16539 360 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 GUCA2BQ16661 112 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 C4orf26Q17RF5 130 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 ZNF630Q2M218 657 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 TIMM50Q3ZCQ8 353 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 FBXW9Q5XUX1 488 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 DNAJC24Q6P3W2 148 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 RTL4Q6ZR62 310 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 FAM183BPQ6ZVS7 135 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 H2AFVQ71UI9 128 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 TMEM179BQ7Z7N9 219 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 NKAPP1Q8N9T2 125 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 RXFP4Q8TDU9 374 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 NEK7Q8TDX7 302 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 C16orf78Q8WTQ4 265 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 DCUN1D4Q92564 292 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 SMIM8Q96KF7 97 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 C18orf12Q96KH6 178 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 SIGLEC12Q96PQ1 595 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 TIPINQ9BVW5 301 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 PECRQ9BY49 303 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 DEFB127Q9H1M4 99 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 DMAC2Q9NW81 257 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 MARCH5Q9NX47 278 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 IL17CQ9P0M4 197 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 LSM5Q9Y4Y9 91 aaKnown RBP2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 ENPP4Q9Y6X5 453 aa2.79□□□□□ -1.96
HMGB1P22-201ENST00000505315 NFASCO94856 1347 aa2.78□□□□□ -1.96
HMGB1P22-201ENST00000505315 A0A087X002 238 aa2.78□□□□□ -1.96
HMGB1P22-201ENST00000505315 TRAV19A0A0A6YYK7 116 aa2.78□□□□□ -1.96
HMGB1P22-201ENST00000505315 TGIF2-C20orf24A0A0A6YYL0 155 aa2.78□□□□□ -1.96
HMGB1P22-201ENST00000505315 IGHV3OR16-9A0A0B4J2B5 98 aa2.78□□□□□ -1.96
HMGB1P22-201ENST00000505315 A0A0J9YXY3 114 aa2.78□□□□□ -1.96
HMGB1P22-201ENST00000505315 ZNF233A6NK53 670 aa2.78□□□□□ -1.96
HMGB1P22-201ENST00000505315 H0Y9J4 135 aa2.78□□□□□ -1.96
HMGB1P22-201ENST00000505315 H3BP45 60 aa2.78□□□□□ -1.96
HMGB1P22-201ENST00000505315 FAM189A1O60320 539 aa2.78□□□□□ -1.96
HMGB1P22-201ENST00000505315 AMBPP02760 352 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms