RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 GPER1Q99527 375 aa12.37□□□□□ -0.43
LRIF1-202ENST00000485275 PEX16Q9Y5Y5 336 aa12.37□□□□□ -0.43
LRIF1-202ENST00000485275 V9GYH0 126 aa12.37□□□□□ -0.43
LRIF1-202ENST00000485275 CHD3Q12873 2000 aaKnown RBP12.37□□□□□ -0.43
LRIF1-202ENST00000485275 ARSBP15848 533 aa12.36□□□□□ -0.43
LRIF1-202ENST00000485275 DYNC1I2Q13409 638 aaKnown RBP12.36□□□□□ -0.43
LRIF1-202ENST00000485275 BATF2Q8N1L9 274 aa12.36□□□□□ -0.43
LRIF1-202ENST00000485275 OR5A2Q8NGI9 324 aa12.36□□□□□ -0.43
LRIF1-202ENST00000485275 OR10K1Q8NGX5 313 aa12.36□□□□□ -0.43
LRIF1-202ENST00000485275 RNF170Q96K19 258 aa12.36□□□□□ -0.43
LRIF1-202ENST00000485275 TMEM100Q9NV29 134 aa12.36□□□□□ -0.43
LRIF1-202ENST00000485275 TAAR3PQ9P1P4 343 aa12.36□□□□□ -0.43
LRIF1-202ENST00000485275 SLC7A11Q9UPY5 501 aa12.36□□□□□ -0.43
LRIF1-202ENST00000485275 HAAOP46952 286 aa12.35□□□□□ -0.43
LRIF1-202ENST00000485275 HOXA4Q00056 320 aaPredicted RBP12.35□□□□□ -0.43
LRIF1-202ENST00000485275 ZNF154Q13106 437 aa12.35□□□□□ -0.43
LRIF1-202ENST00000485275 OR8G1Q15617 311 aa12.35□□□□□ -0.43
LRIF1-202ENST00000485275 CNIH2Q6PI25 160 aa12.35□□□□□ -0.43
LRIF1-202ENST00000485275 ZNF611Q8N823 705 aa12.35□□□□□ -0.43
LRIF1-202ENST00000485275 OR8S1Q8NH09 359 aa12.35□□□□□ -0.43
LRIF1-202ENST00000485275 FAM46BQ96A09 425 aa12.35□□□□□ -0.43
LRIF1-202ENST00000485275 OR51I2Q9H344 312 aa12.35□□□□□ -0.43
LRIF1-202ENST00000485275 RAI1Q7Z5J4 1906 aaPredicted RBP12.35□□□□□ -0.43
LRIF1-202ENST00000485275 CACNA1DQ01668 2161 aa12.35□□□□□ -0.43
LRIF1-202ENST00000485275 SPTAN1Q13813 2472 aaKnown RBP12.35□□□□□ -0.43
LRIF1-202ENST00000485275 OR5B21A6NL26 309 aa12.35□□□□□ -0.43
LRIF1-202ENST00000485275 TMEM14DPA8MWL7 114 aa12.35□□□□□ -0.43
LRIF1-202ENST00000485275 F8VVB4 439 aa12.35□□□□□ -0.43
LRIF1-202ENST00000485275 F8VWA3 439 aa12.35□□□□□ -0.43
LRIF1-202ENST00000485275 SYNGR1O43759 233 aa12.35□□□□□ -0.43
LRIF1-202ENST00000485275 CLDN1O95832 211 aa12.35□□□□□ -0.43
LRIF1-202ENST00000485275 BPNT1O95861 308 aa12.35□□□□□ -0.43
LRIF1-202ENST00000485275 ETV6P41212 452 aa12.35□□□□□ -0.43
LRIF1-202ENST00000485275 GNG3P63215 75 aa12.35□□□□□ -0.43
LRIF1-202ENST00000485275 PDZK1IP1Q13113 114 aa12.35□□□□□ -0.43
LRIF1-202ENST00000485275 ZNF79Q15937 498 aa12.35□□□□□ -0.43
LRIF1-202ENST00000485275 MST1LQ2TV78 715 aa12.35□□□□□ -0.43
LRIF1-202ENST00000485275 ZNF672Q499Z4 452 aaPredicted RBP12.35□□□□□ -0.43
LRIF1-202ENST00000485275 FAM76BQ5HYJ3 339 aa12.35□□□□□ -0.43
LRIF1-202ENST00000485275 MZT2AQ6P582 158 aa12.35□□□□□ -0.43
LRIF1-202ENST00000485275 LINC00299Q6ZSB3 139 aa12.35□□□□□ -0.43
LRIF1-202ENST00000485275 RTN4RL2Q86UN3 420 aa12.35□□□□□ -0.43
LRIF1-202ENST00000485275 CMTM4Q8IZR5 234 aa12.35□□□□□ -0.43
LRIF1-202ENST00000485275 OR4M1Q8NGD0 313 aa12.35□□□□□ -0.43
LRIF1-202ENST00000485275 FAM222BQ8WU58 562 aa12.35□□□□□ -0.43
LRIF1-202ENST00000485275 PLK3Q9H4B4 646 aa12.35□□□□□ -0.43
LRIF1-202ENST00000485275 ETV7Q9Y603 341 aa12.35□□□□□ -0.43
LRIF1-202ENST00000485275 ARFGEF3Q5TH69 2177 aa12.34□□□□□ -0.43
LRIF1-202ENST00000485275 TMEM127O75204 238 aa12.34□□□□□ -0.43
LRIF1-202ENST00000485275 RHBDL1O75783 438 aa12.34□□□□□ -0.43
LRIF1-202ENST00000485275 KDM4BO94953 1096 aa12.34□□□□□ -0.43
LRIF1-202ENST00000485275 SFTPBP07988 381 aa12.34□□□□□ -0.43
LRIF1-202ENST00000485275 S100A5P33763 92 aa12.34□□□□□ -0.43
LRIF1-202ENST00000485275 SERPINF1P36955 418 aa12.34□□□□□ -0.43
LRIF1-202ENST00000485275 NPBWR2P48146 333 aa12.34□□□□□ -0.43
LRIF1-202ENST00000485275 ATP1B3P54709 279 aa12.34□□□□□ -0.43
LRIF1-202ENST00000485275 SCAND1P57086 179 aa12.34□□□□□ -0.43
LRIF1-202ENST00000485275 DAZAP2Q15038 168 aaPredicted RBP12.34□□□□□ -0.43
LRIF1-202ENST00000485275 MOGQ16653 247 aa12.34□□□□□ -0.43
LRIF1-202ENST00000485275 SLC22A6Q4U2R8 563 aa12.34□□□□□ -0.43
LRIF1-202ENST00000485275 UBE2NLQ5JXB2 153 aa12.34□□□□□ -0.43
LRIF1-202ENST00000485275 PRAMEF6Q5VXH4 476 aa12.34□□□□□ -0.43
LRIF1-202ENST00000485275 HAGHLQ6PII5 290 aaPredicted RBP12.34□□□□□ -0.43
LRIF1-202ENST00000485275 ASCL4Q6XD76 172 aa12.34□□□□□ -0.43
LRIF1-202ENST00000485275 MEX3BQ6ZN04 569 aaKnown RBP12.34□□□□□ -0.43
LRIF1-202ENST00000485275 SLC25A26Q70HW3 274 aa12.34□□□□□ -0.43
LRIF1-202ENST00000485275 ZCCHC24Q8N2G6 241 aaKnown RBP12.34□□□□□ -0.43
LRIF1-202ENST00000485275 OR2Z1Q8NG97 314 aa12.34□□□□□ -0.43
LRIF1-202ENST00000485275 OR13G1Q8NGZ3 307 aa12.34□□□□□ -0.43
LRIF1-202ENST00000485275 GAL3ST1Q99999 423 aa12.34□□□□□ -0.43
LRIF1-202ENST00000485275 RTL8AQ9BWD3 113 aa12.34□□□□□ -0.43
LRIF1-202ENST00000485275 RHBDL2Q9NX52 303 aa12.34□□□□□ -0.43
LRIF1-202ENST00000485275 CISD1Q9NZ45 108 aaKnown RBP12.34□□□□□ -0.43
LRIF1-202ENST00000485275 KLF2Q9Y5W3 355 aaPredicted RBP12.34□□□□□ -0.43
LRIF1-202ENST00000485275 A0A0A6YYD4 124 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 PRSS44E7EML9 344 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 APOA1P02647 267 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 TMEM225BP0DP42 221 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 EVX1P49640 407 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 MPPED2Q15777 294 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 MOGAT2Q3SYC2 334 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 LRRC28Q86X40 367 aaPredicted RBP12.33□□□□□ -0.44
LRIF1-202ENST00000485275 C11orf53Q8IXP5 236 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 IZUMO1Q8IYV9 350 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 PNLDC1Q8NA58 520 aaKnown RBP12.33□□□□□ -0.44
LRIF1-202ENST00000485275 ZNF488Q96MN9 340 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 SDHCQ99643 169 aaPredicted RBP12.33□□□□□ -0.44
LRIF1-202ENST00000485275 SOSTQ9BQB4 213 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 NICN1Q9BSH3 213 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 MRI1Q9BV20 369 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 BANF2Q9H503 90 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 CYSLTR2Q9NS75 346 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 MTCH1Q9NZJ7 389 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 ZNF581Q9P0T4 197 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 EXTL2Q9UBQ6 330 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 J3QRK9 145 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 SPRY3O43610 288 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 CTAG2O75638 210 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 IGHV1-46P01743 117 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 SERPINA2P20848 420 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms