RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, human

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC1-208	ENST00000482310	BARX1	Q9HBU1	254 aa	Predicted RBP	11.18	□□□□□ -0.62
HDAC1-208	ENST00000482310	NEK6	Q9HC98	313 aa		11.18	□□□□□ -0.62
HDAC1-208	ENST00000482310	GCM1	Q9NP62	436 aa		11.18	□□□□□ -0.62
HDAC1-208	ENST00000482310	IGKV1-27	A0A075B6S5	117 aa		11.17	□□□□□ -0.62
HDAC1-208	ENST00000482310	PQLC2L	A1A4F0	135 aa		11.17	□□□□□ -0.62
HDAC1-208	ENST00000482310	SMIM30	A4D0T7	59 aa		11.17	□□□□□ -0.62
HDAC1-208	ENST00000482310	ISPD	A4D126	451 aa		11.17	□□□□□ -0.62
HDAC1-208	ENST00000482310	OR5B21	A6NL26	309 aa		11.17	□□□□□ -0.62
HDAC1-208	ENST00000482310	CDIPT	O14735	213 aa		11.17	□□□□□ -0.62
HDAC1-208	ENST00000482310	PPIH	O43447	177 aa	Known RBP	11.17	□□□□□ -0.62
HDAC1-208	ENST00000482310	SPRY1	O43609	319 aa	Predicted RBP	11.17	□□□□□ -0.62
HDAC1-208	ENST00000482310	SYNGR1	O43759	233 aa		11.17	□□□□□ -0.62
HDAC1-208	ENST00000482310	PSMA1	P25786	263 aa	Known RBP	11.17	□□□□□ -0.62
HDAC1-208	ENST00000482310	CALR	P27797	417 aa	Known RBP	11.17	□□□□□ -0.62
HDAC1-208	ENST00000482310	CD80	P33681	288 aa		11.17	□□□□□ -0.62
HDAC1-208	ENST00000482310	PMEL	P40967	661 aa		11.17	□□□□□ -0.62
HDAC1-208	ENST00000482310	FUT6	P51993	359 aa		11.17	□□□□□ -0.62
HDAC1-208	ENST00000482310	CLEC12B	Q2HXU8	276 aa		11.17	□□□□□ -0.62
HDAC1-208	ENST00000482310	HFE	Q30201	348 aa		11.17	□□□□□ -0.62
HDAC1-208	ENST00000482310	HSD17B12	Q53GQ0	312 aa		11.17	□□□□□ -0.62
HDAC1-208	ENST00000482310	DDI2	Q5TDH0	399 aa		11.17	□□□□□ -0.62
HDAC1-208	ENST00000482310	C22orf42	Q6IC83	251 aa		11.17	□□□□□ -0.62
HDAC1-208	ENST00000482310	CLEC2A	Q6UVW9	174 aa		11.17	□□□□□ -0.62
HDAC1-208	ENST00000482310	UTS2B	Q765I0	119 aa		11.17	□□□□□ -0.62
HDAC1-208	ENST00000482310	DNAAF1	Q8NEP3	725 aa		11.17	□□□□□ -0.62
HDAC1-208	ENST00000482310	OR52N4	Q8NGI2	321 aa		11.17	□□□□□ -0.62
HDAC1-208	ENST00000482310	OR5A2	Q8NGI9	324 aa		11.17	□□□□□ -0.62
HDAC1-208	ENST00000482310	GPER1	Q99527	375 aa		11.17	□□□□□ -0.62
HDAC1-208	ENST00000482310	FAM192A	Q9GZU8	254 aa		11.17	□□□□□ -0.62
HDAC1-208	ENST00000482310	SCOC	Q9UIL1	159 aa		11.17	□□□□□ -0.62
HDAC1-208	ENST00000482310	STUB1	Q9UNE7	303 aa		11.17	□□□□□ -0.62
HDAC1-208	ENST00000482310	DOCK11	Q5JSL3	2073 aa		11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	CCDC168	Q8NDH2	2452 aa		11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	LRP5L	A4QPB2	252 aa		11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	TMEM210	A6NLX4	147 aa		11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	MAGEB3	O15480	346 aa		11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	GPX5	O75715	221 aa		11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	RHBDL1	O75783	438 aa		11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	IRF2	P14316	349 aa		11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	JUNB	P17275	347 aa	Predicted RBP	11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	EGR1	P18146	543 aa		11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	PRKACB	P22694	351 aa		11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	BDKRB2	P30411	391 aa		11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	CRYBB2	P43320	205 aa		11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	RBP2	P50120	134 aa		11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	PDLIM4	P50479	330 aa		11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	ATP1B3	P54709	279 aa		11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	MTCP1	P56278	107 aa		11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	LSM3	P62310	102 aa	Known RBP	11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	LHFPL2	Q6ZUX7	228 aa		11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	CALHM1	Q8IU99	346 aa		11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	OR11L1	Q8NGX0	322 aa		11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	LRRC29	Q8WV35	223 aa		11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	FAM168A	Q92567	244 aa		11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	SLAMF9	Q96A28	289 aa		11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	ZNF488	Q96MN9	340 aa		11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	TECTB	Q96PL2	329 aa		11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	OR51I2	Q9H344	312 aa		11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	RNF167	Q9H6Y7	350 aa		11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	TCF7L1	Q9HCS4	588 aa		11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	TMEM106B	Q9NUM4	274 aa		11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	SSR3	Q9UNL2	185 aa		11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	MED13L	Q71F56	2210 aa		11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	YLPM1	P49750	1951 aa	Known RBP	11.16	□□□□□ -0.62
HDAC1-208	ENST00000482310	IGHV3OR15-7	A0A075B7D8	119 aa		11.15	□□□□□ -0.62
HDAC1-208	ENST00000482310	IGHV4-30-2	A0A087WSY4	118 aa		11.15	□□□□□ -0.62
HDAC1-208	ENST00000482310	CLDN25	C9JDP6	229 aa		11.15	□□□□□ -0.62
HDAC1-208	ENST00000482310	AKR7A2	O43488	359 aa		11.15	□□□□□ -0.62
HDAC1-208	ENST00000482310	ANGPTL7	O43827	346 aa		11.15	□□□□□ -0.62
HDAC1-208	ENST00000482310	RP2	O75695	350 aa		11.15	□□□□□ -0.62
HDAC1-208	ENST00000482310	SC5D	O75845	299 aa		11.15	□□□□□ -0.62
HDAC1-208	ENST00000482310	UCHL1	P09936	223 aa		11.15	□□□□□ -0.62
HDAC1-208	ENST00000482310	CALCB	P10092	127 aa		11.15	□□□□□ -0.62
HDAC1-208	ENST00000482310	PAX1	P15863	534 aa		11.15	□□□□□ -0.62
HDAC1-208	ENST00000482310	IGFBP3	P17936	291 aa	Predicted RBP	11.15	□□□□□ -0.62
HDAC1-208	ENST00000482310	FST	P19883	344 aa		11.15	□□□□□ -0.62
HDAC1-208	ENST00000482310	TGFBR1	P36897	503 aa		11.15	□□□□□ -0.62
HDAC1-208	ENST00000482310	SFRP4	Q6FHJ7	346 aa	Predicted RBP	11.15	□□□□□ -0.62
HDAC1-208	ENST00000482310	WDR82	Q6UXN9	313 aa		11.15	□□□□□ -0.62
HDAC1-208	ENST00000482310	UNQ9370/PRO34162	Q6UXP9	181 aa		11.15	□□□□□ -0.62
HDAC1-208	ENST00000482310	GPR141	Q7Z602	305 aa		11.15	□□□□□ -0.62
HDAC1-208	ENST00000482310	ZNF573	Q86YE8	665 aa		11.15	□□□□□ -0.62
HDAC1-208	ENST00000482310	C11orf53	Q8IXP5	236 aa		11.15	□□□□□ -0.62
HDAC1-208	ENST00000482310	LRRC75A-AS1	Q8N1F1	130 aa		11.15	□□□□□ -0.62
HDAC1-208	ENST00000482310	JAGN1	Q8N5M9	183 aa		11.15	□□□□□ -0.62
HDAC1-208	ENST00000482310	CELF2-AS1	Q8N7Q2	184 aa		11.15	□□□□□ -0.62
HDAC1-208	ENST00000482310	THRSP	Q92748	146 aa		11.15	□□□□□ -0.62
HDAC1-208	ENST00000482310	ITFG2	Q969R8	447 aa		11.15	□□□□□ -0.62
HDAC1-208	ENST00000482310	SPSB1	Q96BD6	273 aa		11.15	□□□□□ -0.62
HDAC1-208	ENST00000482310	YIPF6	Q96EC8	236 aa		11.15	□□□□□ -0.62
HDAC1-208	ENST00000482310	SEH1L	Q96EE3	360 aa		11.15	□□□□□ -0.62
HDAC1-208	ENST00000482310		Q96MF0	132 aa		11.15	□□□□□ -0.62
HDAC1-208	ENST00000482310	SLITRK2	Q9H156	845 aa		11.15	□□□□□ -0.62
HDAC1-208	ENST00000482310	ELL3	Q9HB65	397 aa	Predicted RBP	11.15	□□□□□ -0.62
HDAC1-208	ENST00000482310	TXNL4B	Q9NX01	149 aa	Known RBP	11.15	□□□□□ -0.62
HDAC1-208	ENST00000482310	TRDV1	A0A1B0GX56	115 aa		11.14	□□□□□ -0.63
HDAC1-208	ENST00000482310	LRRC30	A6NM36	301 aa		11.14	□□□□□ -0.63
HDAC1-208	ENST00000482310		J3QT63	122 aa		11.14	□□□□□ -0.63
HDAC1-208	ENST00000482310	WNT9B	O14905	357 aa		11.14	□□□□□ -0.63
HDAC1-208	ENST00000482310	TFAP2A	P05549	437 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms