RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 SIRT7Q9NRC8 400 aa11.48□□□□□ -0.57
CCNL1-216ENST00000475298 FAM86C1Q9NVL1 165 aa11.48□□□□□ -0.57
CCNL1-216ENST00000475298 VSX1Q9NZR4 365 aaPredicted RBP11.48□□□□□ -0.57
CCNL1-216ENST00000475298 DNAJB11Q9UBS4 358 aa11.48□□□□□ -0.57
CCNL1-216ENST00000475298 ZNF107Q9UII5 783 aaPredicted RBP11.48□□□□□ -0.57
CCNL1-216ENST00000475298 LRP12Q9Y561 859 aa11.48□□□□□ -0.57
CCNL1-216ENST00000475298 MED12Q93074 2177 aa11.47□□□□□ -0.57
CCNL1-216ENST00000475298 ELOA3CA0A087WX78 387 aaPredicted RBP11.47□□□□□ -0.57
CCNL1-216ENST00000475298 CCDC187A0A096LP49 1063 aa11.47□□□□□ -0.57
CCNL1-216ENST00000475298 IGKV1D-43A0A0B4J1Z2 117 aa11.47□□□□□ -0.57
CCNL1-216ENST00000475298 SLC17A2O00624 439 aa11.47□□□□□ -0.57
CCNL1-216ENST00000475298 ZNF432O94892 652 aa11.47□□□□□ -0.57
CCNL1-216ENST00000475298 ARRB1P49407 418 aaPredicted RBP11.47□□□□□ -0.57
CCNL1-216ENST00000475298 CYCSP99999 105 aaKnown RBP11.47□□□□□ -0.57
CCNL1-216ENST00000475298 RAB11BQ15907 218 aa11.47□□□□□ -0.57
CCNL1-216ENST00000475298 MOGAT2Q3SYC2 334 aa11.47□□□□□ -0.57
CCNL1-216ENST00000475298 LINC00346Q8IVM7 164 aa11.47□□□□□ -0.57
CCNL1-216ENST00000475298 ZNF664Q8N3J9 261 aa11.47□□□□□ -0.57
CCNL1-216ENST00000475298 APCDD1LQ8NCL9 501 aa11.47□□□□□ -0.57
CCNL1-216ENST00000475298 SUSD2Q9UGT4 822 aa11.47□□□□□ -0.57
CCNL1-216ENST00000475298 HS3ST3B1Q9Y662 390 aa11.47□□□□□ -0.57
CCNL1-216ENST00000475298 LOC101059948A0A1B0GTJ6 334 aa11.47□□□□□ -0.57
CCNL1-216ENST00000475298 FTCDNL1E5RQL4 147 aa11.47□□□□□ -0.57
CCNL1-216ENST00000475298 STK17BO94768 372 aa11.47□□□□□ -0.57
CCNL1-216ENST00000475298 TSPAN15O95858 294 aa11.47□□□□□ -0.57
CCNL1-216ENST00000475298 IL18BPO95998 194 aa11.47□□□□□ -0.57
CCNL1-216ENST00000475298 TOMM20Q15388 145 aa11.47□□□□□ -0.57
CCNL1-216ENST00000475298 UBE2V2Q15819 145 aa11.47□□□□□ -0.57
CCNL1-216ENST00000475298 ZNF674Q2M3X9 581 aa11.47□□□□□ -0.57
CCNL1-216ENST00000475298 ZNF343Q6P1L6 599 aa11.47□□□□□ -0.57
CCNL1-216ENST00000475298 CARFQ8N187 725 aa11.47□□□□□ -0.57
CCNL1-216ENST00000475298 CD300LFQ8TDQ1 290 aa11.47□□□□□ -0.57
CCNL1-216ENST00000475298 Q8WTZ3 238 aa11.47□□□□□ -0.57
CCNL1-216ENST00000475298 MED29Q9NX70 200 aa11.47□□□□□ -0.57
CCNL1-216ENST00000475298 TAS2R4Q9NYW5 299 aa11.47□□□□□ -0.57
CCNL1-216ENST00000475298 TRIOBPQ9H2D6 2365 aa11.46□□□□□ -0.57
CCNL1-216ENST00000475298 TMEM235A6NFC5 223 aa11.46□□□□□ -0.57
CCNL1-216ENST00000475298 ZNF727A8MUV8 499 aa11.46□□□□□ -0.57
CCNL1-216ENST00000475298 MS4A18H0YCH9 400 aa11.46□□□□□ -0.57
CCNL1-216ENST00000475298 H3BML4 177 aa11.46□□□□□ -0.57
CCNL1-216ENST00000475298 PHOX2AO14813 284 aa11.46□□□□□ -0.57
CCNL1-216ENST00000475298 LMX1BO60663 402 aa11.46□□□□□ -0.57
CCNL1-216ENST00000475298 PTBP3O95758 552 aaKnown RBP11.46□□□□□ -0.57
CCNL1-216ENST00000475298 OPN1LWP04000 364 aa11.46□□□□□ -0.57
CCNL1-216ENST00000475298 EDN3P14138 238 aa11.46□□□□□ -0.57
CCNL1-216ENST00000475298 THBS4P35443 961 aa11.46□□□□□ -0.57
CCNL1-216ENST00000475298 AFF3P51826 1226 aaKnown RBP11.46□□□□□ -0.57
CCNL1-216ENST00000475298 ELOBQ15370 118 aa11.46□□□□□ -0.57
CCNL1-216ENST00000475298 MS4A18Q3C1V0 323 aa11.46□□□□□ -0.57
CCNL1-216ENST00000475298 RNASE10Q5GAN6 216 aaKnown RBP11.46□□□□□ -0.57
CCNL1-216ENST00000475298 ZNF529Q6P280 563 aa11.46□□□□□ -0.57
CCNL1-216ENST00000475298 OR51A2Q8NGJ7 313 aa11.46□□□□□ -0.57
CCNL1-216ENST00000475298 CRLF2Q9HC73 371 aa11.46□□□□□ -0.57
CCNL1-216ENST00000475298 CGGBP1Q9UFW8 167 aaPredicted RBP11.46□□□□□ -0.57
CCNL1-216ENST00000475298 EMC9Q9Y3B6 208 aa11.46□□□□□ -0.57
CCNL1-216ENST00000475298 EXPH5Q8NEV8 1989 aa11.46□□□□□ -0.58
CCNL1-216ENST00000475298 WIPF3A6NGB9 483 aa11.46□□□□□ -0.58
CCNL1-216ENST00000475298 RAMP1O60894 148 aa11.46□□□□□ -0.58
CCNL1-216ENST00000475298 CD200P41217 278 aa11.46□□□□□ -0.58
CCNL1-216ENST00000475298 EIF5AP63241 154 aaKnown RBP11.46□□□□□ -0.58
CCNL1-216ENST00000475298 SHBQ15464 509 aa11.46□□□□□ -0.58
CCNL1-216ENST00000475298 SLC22A6Q4U2R8 563 aa11.46□□□□□ -0.58
CCNL1-216ENST00000475298 HIST2H3PS2Q5TEC6 136 aa11.46□□□□□ -0.58
CCNL1-216ENST00000475298 FAM69BQ5VUD6 431 aa11.46□□□□□ -0.58
CCNL1-216ENST00000475298 TMEM225Q6GV28 225 aa11.46□□□□□ -0.58
CCNL1-216ENST00000475298 FDX2Q6P4F2 183 aa11.46□□□□□ -0.58
CCNL1-216ENST00000475298 PLPP5Q8NEB5 264 aa11.46□□□□□ -0.58
CCNL1-216ENST00000475298 ASB5Q8WWX0 329 aa11.46□□□□□ -0.58
CCNL1-216ENST00000475298 PACRGQ96M98 296 aaPredicted RBP11.46□□□□□ -0.58
CCNL1-216ENST00000475298 JSRP1Q96MG2 331 aaPredicted RBP11.46□□□□□ -0.58
CCNL1-216ENST00000475298 NOL4LQ96MY1 436 aaPredicted RBP11.46□□□□□ -0.58
CCNL1-216ENST00000475298 EIF5A2Q9GZV4 153 aaKnown RBP11.46□□□□□ -0.58
CCNL1-216ENST00000475298 SEMA5BQ9P283 1151 aa11.46□□□□□ -0.58
CCNL1-216ENST00000475298 DHDHQ9UQ10 334 aa11.46□□□□□ -0.58
CCNL1-216ENST00000475298 C9J4A7 227 aa11.45□□□□□ -0.58
CCNL1-216ENST00000475298 NME2P1O60361 137 aa11.45□□□□□ -0.58
CCNL1-216ENST00000475298 CST4P01036 141 aa11.45□□□□□ -0.58
CCNL1-216ENST00000475298 POU3F1Q03052 451 aaPredicted RBP11.45□□□□□ -0.58
CCNL1-216ENST00000475298 ROM1Q03395 351 aa11.45□□□□□ -0.58
CCNL1-216ENST00000475298 GLO1Q04760 184 aa11.45□□□□□ -0.58
CCNL1-216ENST00000475298 PMPCAQ10713 525 aa11.45□□□□□ -0.58
CCNL1-216ENST00000475298 RAB32Q13637 225 aa11.45□□□□□ -0.58
CCNL1-216ENST00000475298 DCXRQ7Z4W1 244 aa11.45□□□□□ -0.58
CCNL1-216ENST00000475298 ANKRD37Q7Z713 158 aa11.45□□□□□ -0.58
CCNL1-216ENST00000475298 CATSPERDQ86XM0 798 aa11.45□□□□□ -0.58
CCNL1-216ENST00000475298 ZNF584Q8IVC4 421 aa11.45□□□□□ -0.58
CCNL1-216ENST00000475298 OR52N5Q8NH56 324 aa11.45□□□□□ -0.58
CCNL1-216ENST00000475298 HPSE2Q8WWQ2 592 aa11.45□□□□□ -0.58
CCNL1-216ENST00000475298 HIST1H2BLQ99880 126 aa11.45□□□□□ -0.58
CCNL1-216ENST00000475298 EMC6Q9BV81 110 aa11.45□□□□□ -0.58
CCNL1-216ENST00000475298 DDA1Q9BW61 102 aa11.45□□□□□ -0.58
CCNL1-216ENST00000475298 SNHG12Q9BXW3 62 aa11.45□□□□□ -0.58
CCNL1-216ENST00000475298 PCED1AQ9H1Q7 454 aa11.45□□□□□ -0.58
CCNL1-216ENST00000475298 FSCN3Q9NQT6 498 aa11.45□□□□□ -0.58
CCNL1-216ENST00000475298 PRR13Q9NZ81 148 aa11.45□□□□□ -0.58
CCNL1-216ENST00000475298 CACNA1EQ15878 2313 aa11.45□□□□□ -0.58
CCNL1-216ENST00000475298 TAAR5O14804 337 aa11.45□□□□□ -0.58
CCNL1-216ENST00000475298 TOX3O15405 576 aaPredicted RBP11.45□□□□□ -0.58
CCNL1-216ENST00000475298 SOX15O60248 233 aa11.45□□□□□ -0.58
CCNL1-216ENST00000475298 CYTIPO60759 359 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms